RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 WTAPQ15007 396 aa20.53■□□□□ 0.88
RAB40C-203ENST00000535977 MAP3K14Q99558 947 aa20.53■□□□□ 0.88
RAB40C-203ENST00000535977 IKBKBO14920 756 aa20.52■□□□□ 0.88
RAB40C-203ENST00000535977 WDHD1O75717 1129 aaPredicted RBP20.52■□□□□ 0.88
RAB40C-203ENST00000535977 AIFM3Q96NN9 605 aa20.52■□□□□ 0.88
RAB40C-203ENST00000535977 RNF216Q9NWF9 866 aaPredicted RBP20.52■□□□□ 0.88
RAB40C-203ENST00000535977 SLC26A6Q9BXS9 759 aa20.52■□□□□ 0.87
RAB40C-203ENST00000535977 SENP2Q9HC62 589 aa20.52■□□□□ 0.87
RAB40C-203ENST00000535977 ANAPC4Q9UJX5 808 aa20.52■□□□□ 0.87
RAB40C-203ENST00000535977 RANBP6O60518 1105 aaKnown RBP20.51■□□□□ 0.87
RAB40C-203ENST00000535977 RXRAP19793 462 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 UBE4AQ14139 1066 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 RTN1Q16799 776 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 RESP18Q5W5W9 173 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 NKX2-3Q8TAU0 364 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 TUBE1Q9UJT0 475 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 MYO1BO43795 1136 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 SASH3O75995 380 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 REXO1L1PQ8IX06 675 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 LCORLQ8N3X6 602 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 GOLGA5Q8TBA6 731 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 UBXN4Q92575 508 aa20.51■□□□□ 0.87
RAB40C-203ENST00000535977 OSBPL5Q9H0X9 879 aaPredicted RBP20.51■□□□□ 0.87
RAB40C-203ENST00000535977 HOOK1Q9UJC3 728 aaKnown RBP20.51■□□□□ 0.87
RAB40C-203ENST00000535977 ZNF804BA4D1E1 1349 aa20.5■□□□□ 0.87
RAB40C-203ENST00000535977 MARCKSP29966 332 aaPredicted RBP20.5■□□□□ 0.87
RAB40C-203ENST00000535977 DPCR1Q3MIW9 517 aa20.5■□□□□ 0.87
RAB40C-203ENST00000535977 E4F1Q66K89 784 aaPredicted RBP20.5■□□□□ 0.87
RAB40C-203ENST00000535977 PPP1R13BQ96KQ4 1090 aa20.5■□□□□ 0.87
RAB40C-203ENST00000535977 FOXP1Q9H334 677 aaPredicted RBP20.5■□□□□ 0.87
RAB40C-203ENST00000535977 GUCY2CP25092 1073 aa20.5■□□□□ 0.87
RAB40C-203ENST00000535977 ITPK1Q13572 414 aa20.5■□□□□ 0.87
RAB40C-203ENST00000535977 BARGINQ6ZT62 677 aa20.5■□□□□ 0.87
RAB40C-203ENST00000535977 NOSTRINQ8IVI9 506 aa20.5■□□□□ 0.87
RAB40C-203ENST00000535977 TOMM22Q9NS69 142 aa20.5■□□□□ 0.87
RAB40C-203ENST00000535977 BCORQ6W2J9 1755 aa20.5■□□□□ 0.87
RAB40C-203ENST00000535977 DEXIO95424 95 aa20.49■□□□□ 0.87
RAB40C-203ENST00000535977 MMP1P03956 469 aa20.49■□□□□ 0.87
RAB40C-203ENST00000535977 PCP11498 1178 aaKnown RBP20.49■□□□□ 0.87
RAB40C-203ENST00000535977 ANKRD18AQ8IVF6 992 aa20.49■□□□□ 0.87
RAB40C-203ENST00000535977 MARCH10Q8NA82 808 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-203ENST00000535977 MYCBPQ99417 103 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-203ENST00000535977 CYP7A1P22680 504 aa20.49■□□□□ 0.87
RAB40C-203ENST00000535977 SMC1AQ14683 1233 aaKnown RBP20.49■□□□□ 0.87
RAB40C-203ENST00000535977 SF3B3Q15393 1217 aaKnown RBP20.49■□□□□ 0.87
RAB40C-203ENST00000535977 NCAPGQ9BPX3 1015 aa20.49■□□□□ 0.87
RAB40C-203ENST00000535977 TBC1D8O95759 1140 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 PPARAQ07869 468 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 RILPL1Q5EBL4 403 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 SHC4Q6S5L8 630 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 KRI1Q8N9T8 703 aaKnown RBP20.48■□□□□ 0.87
RAB40C-203ENST00000535977 ESR2Q92731 530 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 ACSBG1Q96GR2 724 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 BRMS1Q9HCU9 246 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 SNAP23O00161 211 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 PRKAB2O43741 272 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 ERCC4Q92889 916 aaPredicted RBP20.48■□□□□ 0.87
RAB40C-203ENST00000535977 UBAC1Q9BSL1 405 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 INCENPQ9NQS7 918 aa20.48■□□□□ 0.87
RAB40C-203ENST00000535977 BSDC1Q9NW68 430 aaPredicted RBP20.48■□□□□ 0.87
RAB40C-203ENST00000535977 MAGEB6P1A0A0J9YX57 407 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 NRDCO43847 1150 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 CAVIN4Q5BKX8 364 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 RRP12Q5JTH9 1297 aaKnown RBP20.47■□□□□ 0.87
RAB40C-203ENST00000535977 CRACR2BQ8N4Y2 399 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-203ENST00000535977 GOLGA6L1Q8N7Z2 621 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 CCDC150Q8NCX0 1101 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 CCDC34Q96HJ3 373 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 MYL10Q9BUA6 226 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 JRKLQ9Y4A0 524 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 MROH7-TTC4A0A0A0MT08 1334 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 A0A0G2JS52 829 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 ATP8B1O43520 1251 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 FANCBQ8NB91 859 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 C8orf37Q96NL8 207 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 CEP131Q9UPN4 1083 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 TACC3Q9Y6A5 838 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 NRAPQ86VF7 1730 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 BCL9LQ86UU0 1499 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 LMAN1P49257 510 aa20.47■□□□□ 0.87
RAB40C-203ENST00000535977 TMED8Q6PL24 325 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-203ENST00000535977 PACS2Q86VP3 889 aa20.46■□□□□ 0.87
RAB40C-203ENST00000535977 ZNF831Q5JPB2 1677 aa20.46■□□□□ 0.87
RAB40C-203ENST00000535977 SEMA3EO15041 775 aa20.46■□□□□ 0.87
RAB40C-203ENST00000535977 XBP1P17861 261 aa20.46■□□□□ 0.87
RAB40C-203ENST00000535977 ZNF579Q8NAF0 562 aaKnown RBP20.46■□□□□ 0.87
RAB40C-203ENST00000535977 KCNH3Q9ULD8 1083 aa20.46■□□□□ 0.87
RAB40C-203ENST00000535977 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
RAB40C-203ENST00000535977 A0A087WWV3 80 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 NBPF11Q86T75 865 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 ZNF654Q8IZM8 581 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 DRC1Q96MC2 740 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 BRIP1Q9BX63 1249 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 RAI14Q9P0K7 980 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 ECM29Q5VYK3 1845 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 CBFA2T2O43439 604 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 KCNJ6P48051 423 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 MEX3CQ5U5Q3 659 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms