RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 EN2P19622 333 aaPredicted RBP10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 MTMR2Q13614 643 aa10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 SHROOM1Q2M3G4 852 aaPredicted RBP10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 SLC9C2Q5TAH2 1124 aa10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 TMED8Q6PL24 325 aaPredicted RBP10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 ANKRD13CQ8N6S4 541 aa10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 EDC3Q96F86 508 aaKnown RBP10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 RIOK1Q9BRS2 568 aaKnown RBP10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 BOLA2Q9H3K6 86 aa10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 ZBTB21Q9ULJ3 1066 aa10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 MYH7P12883 1935 aa10.35□□□□□ -0.75
SFSWAP-202ENST00000535202 ZNF532Q9HCE3 1301 aa10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 SMARCA5O60264 1052 aaPredicted RBP10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 EIF5BO60841 1220 aaKnown RBP10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 JAG1P78504 1218 aa10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 PRKCZQ05513 592 aa10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 PABPC4Q13310 644 aaKnown RBP eCLIP10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 SH3D19Q5HYK7 790 aa10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 TTC6Q86TZ1 520 aa10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 METTL16Q86W50 562 aaKnown RBP10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 WDR18Q9BV38 432 aa10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 LRRCC1Q9C099 1032 aa10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 PAG1Q9NWQ8 432 aa10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 TMOD4Q9NZQ9 345 aa10.34□□□□□ -0.75
SFSWAP-202ENST00000535202 HTTP42858 3142 aa10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 TNPO2O14787 897 aaKnown RBP10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 GH2P01242 217 aa10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 POLR3DP05423 398 aaPredicted RBP10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 ATP5JP18859 108 aa10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 GRK4P32298 578 aa10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 BACE1P56817 501 aa10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 CRNKL1Q9BZJ0 848 aaKnown RBP10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 ASCC2Q9H1I8 757 aaPredicted RBP10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 GINM1Q9NU53 330 aa10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 BIN2Q9UBW5 565 aaPredicted RBP10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 SERPINB13Q9UIV8 391 aa10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 GABRQQ9UN88 632 aa10.33□□□□□ -0.76
SFSWAP-202ENST00000535202 KIAA0100Q14667 2235 aaKnown RBP10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 TCRBV5S4A2TA0A5A2 114 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 C19orf81C9J6K1 198 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 USP17L10C9JJH3 530 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 GCLCP48506 637 aaPredicted RBP10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 PLCD1P51178 756 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 IRX3P78415 501 aaPredicted RBP10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 MTFR1Q15390 333 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 FAM110CQ1W6H9 321 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 SLFNL1Q499Z3 407 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 TATDN1Q6P1N9 297 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 LCORLQ8N3X6 602 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 SDR42E1Q8WUS8 393 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 HAUS7Q99871 368 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 EHD4Q9H223 541 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 ARMT1Q9H993 441 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 MCM9Q9NXL9 1143 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 TAOK2Q9UL54 1235 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 MYH8P13535 1937 aa10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 TNRC18O15417 2968 aaPredicted RBP10.32□□□□□ -0.76
SFSWAP-202ENST00000535202 BAZ2AQ9UIF9 1905 aaKnown RBP10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 MBD4O95243 580 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 ADD2P35612 726 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 FLT3LGP49771 235 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 UBXN2AP68543 259 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 RAB3GAP1Q15042 981 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 ZYXQ15942 572 aaKnown RBP10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 ABCB5Q2M3G0 1257 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 CERKLQ49MI3 558 aaPredicted RBP10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 PRPF38BQ5VTL8 546 aaKnown RBP10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 USP17L2Q6R6M4 530 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 SLAIN1Q8ND83 568 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 COA7Q96BR5 231 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 FEZ1Q99689 392 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 DOCK3Q8IZD9 2030 aa10.31□□□□□ -0.76
SFSWAP-202ENST00000535202 PDE4DIPQ5VU43 2346 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 ADCY3O60266 1144 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 CHGBP05060 677 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 CYP2D6P10635 497 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 ELNP15502 786 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 HOXA7P31268 230 aaPredicted RBP10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 SHMT1P34896 483 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 EVX2Q03828 476 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 P2RX7Q99572 595 aaKnown RBP10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 DCTPP1Q9H773 170 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 CABP5Q9NP86 173 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 DCP1AQ9NPI6 582 aaPredicted RBP10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 EMILIN3Q9NT22 766 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 ECHDC1Q9NTX5 307 aa10.3□□□□□ -0.76
SFSWAP-202ENST00000535202 MPHOSPH10O00566 681 aaKnown RBP10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 PRKAB2O43741 272 aa10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 PEX10O60683 326 aa10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 CCL5P13501 91 aa10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 RRP1P56182 461 aaKnown RBP10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 HERVK_113P62684 666 aa10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 GABPAQ06546 454 aa10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 TSHZ3Q63HK5 1081 aa10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 RNF208Q9H0X6 261 aa10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 DAXXQ9UER7 740 aaPredicted RBP10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 CENPFP49454 3210 aa10.29□□□□□ -0.76
SFSWAP-202ENST00000535202 INHAP05111 366 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms