RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SIPA1L1O43166 1804 aa14.49□□□□□ -0.09
SCARB1-204ENST00000535005 ADM5C9JUS6 153 aa14.48□□□□□ -0.09
SCARB1-204ENST00000535005 SHMT1P34896 483 aa14.48□□□□□ -0.09
SCARB1-204ENST00000535005 JAKMIP1Q96N16 626 aaKnown RBP14.48□□□□□ -0.09
SCARB1-204ENST00000535005 MKNK2Q9HBH9 465 aa14.48□□□□□ -0.09
SCARB1-204ENST00000535005 INCENPQ9NQS7 918 aa14.48□□□□□ -0.09
SCARB1-204ENST00000535005 NEDD4P46934 1319 aa14.48□□□□□ -0.09
SCARB1-204ENST00000535005 RASA1P20936 1047 aa14.48□□□□□ -0.09
SCARB1-204ENST00000535005 MB21D2Q8IYB1 491 aaPredicted RBP14.48□□□□□ -0.09
SCARB1-204ENST00000535005 SLC44A5Q8NCS7 719 aa14.48□□□□□ -0.09
SCARB1-204ENST00000535005 ESR2Q92731 530 aa14.48□□□□□ -0.09
SCARB1-204ENST00000535005 DCAF15Q66K64 600 aa14.47□□□□□ -0.09
SCARB1-204ENST00000535005 RALYLQ86SE5 291 aaKnown RBP14.47□□□□□ -0.09
SCARB1-204ENST00000535005 ZNF444Q8N0Y2 327 aaPredicted RBP14.47□□□□□ -0.09
SCARB1-204ENST00000535005 CCDC17Q96LX7 622 aa14.47□□□□□ -0.09
SCARB1-204ENST00000535005 TRIM34Q9BYJ4 488 aa14.47□□□□□ -0.09
SCARB1-204ENST00000535005 GLIS2Q9BZE0 524 aaPredicted RBP14.47□□□□□ -0.09
SCARB1-204ENST00000535005 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.47□□□□□ -0.091e-7■■■■■ 52.9
SCARB1-204ENST00000535005 WDR19Q8NEZ3 1342 aa14.47□□□□□ -0.09
SCARB1-204ENST00000535005 B4E1Z4 1266 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 KIF3CO14782 793 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 PRDM1O75626 825 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 TERF1P54274 439 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 EXOSC10Q01780 885 aaKnown RBP14.46□□□□□ -0.09
SCARB1-204ENST00000535005 RABEP1Q15276 862 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 PRAMEF18Q5VWM3 479 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 MAP1SQ66K74 1059 aaPredicted RBP14.46□□□□□ -0.09
SCARB1-204ENST00000535005 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 BLOC1S2Q6QNY1 142 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 RUFY3Q7L099 469 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 DHX32Q7L7V1 743 aaKnown RBP14.46□□□□□ -0.09
SCARB1-204ENST00000535005 STK11IPQ8N1F8 1099 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 TRIM44Q96DX7 344 aaPredicted RBP14.46□□□□□ -0.09
SCARB1-204ENST00000535005 CDCA5Q96FF9 252 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 MTA3Q9BTC8 594 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 ZSWIM5Q9P217 1185 aa14.46□□□□□ -0.09
SCARB1-204ENST00000535005 SLURP2P0DP57 97 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 CASTP20810 708 aaKnown RBP14.45□□□□□ -0.1
SCARB1-204ENST00000535005 RPS6KB1P23443 525 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 MCM5P33992 734 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 NKX2-3Q8TAU0 364 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 ZNF341Q9BYN7 854 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 TOMM22Q9NS69 142 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 ZNF112Q9UJU3 913 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 CYP46A1Q9Y6A2 500 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 SSC5DA1L4H1 1573 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 FAM196BA6NMK8 535 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 PHF20L1A8MW92 1017 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 RANBP6O60518 1105 aaKnown RBP14.45□□□□□ -0.1
SCARB1-204ENST00000535005 KDM4AO75164 1064 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 YY1P25490 414 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 COL9A3Q14050 684 aaPredicted RBP14.45□□□□□ -0.1
SCARB1-204ENST00000535005 RRP12Q5JTH9 1297 aaKnown RBP14.45□□□□□ -0.1
SCARB1-204ENST00000535005 MIGA2Q7L4E1 593 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 NEDD1Q8NHV4 660 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 PKNOX2Q96KN3 472 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 PANK2Q9BZ23 570 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 ALDH8A1Q9H2A2 487 aaPredicted RBP14.45□□□□□ -0.1
SCARB1-204ENST00000535005 TCP11L1Q9NUJ3 509 aa14.45□□□□□ -0.1
SCARB1-204ENST00000535005 ANTXR2P58335 489 aa14.44□□□□□ -0.1
SCARB1-204ENST00000535005 TFAP4Q01664 338 aa14.44□□□□□ -0.1
SCARB1-204ENST00000535005 CERKLQ49MI3 558 aaPredicted RBP14.44□□□□□ -0.1
SCARB1-204ENST00000535005 DLK2Q6UY11 383 aa14.44□□□□□ -0.1
SCARB1-204ENST00000535005 CLEC17AQ6ZS10 378 aa14.44□□□□□ -0.1
SCARB1-204ENST00000535005 CYB5R4Q7L1T6 521 aa14.44□□□□□ -0.1
SCARB1-204ENST00000535005 FBXL16Q8N461 479 aa14.44□□□□□ -0.1
SCARB1-204ENST00000535005 UPF3BQ9BZI7 483 aaKnown RBP14.44□□□□□ -0.1
SCARB1-204ENST00000535005 GINM1Q9NU53 330 aa14.44□□□□□ -0.1
SCARB1-204ENST00000535005 PLIN4Q96Q06 1357 aa14.44□□□□□ -0.1
SCARB1-204ENST00000535005 ITGBL1O95965 494 aaPredicted RBP14.43□□□□□ -0.1
SCARB1-204ENST00000535005 NF2P35240 595 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 CCDC173Q0VFZ6 552 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 RRP1BQ14684 758 aaKnown RBP14.43□□□□□ -0.1
SCARB1-204ENST00000535005 TSPY2A6NKD2 308 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 PRC1O43663 620 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 PPP1R12BO60237 982 aaPredicted RBP14.43□□□□□ -0.1
SCARB1-204ENST00000535005 USP2O75604 605 aaPredicted RBP14.43□□□□□ -0.1
SCARB1-204ENST00000535005 TSPY3P0CV98 308 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 TSPY8P0CW00 308 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 AKR1B1P15121 316 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 CAP2P40123 477 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 NEK4P51957 841 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 RAB3GAP1Q15042 981 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 CCDC178Q5BJE1 867 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 FAM47AQ5JRC9 791 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 KLRG1Q96E93 195 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 TMEM87BQ96K49 555 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 TTC14Q96N46 770 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.43□□□□□ -0.1
SCARB1-204ENST00000535005 AGXT2Q9BYV1 514 aa14.43□□□□□ -0.1
SCARB1-204ENST00000535005 IGKV6D-41A0A0C4DH26 115 aa14.42□□□□□ -0.1
SCARB1-204ENST00000535005 CTNND1O60716 968 aaKnown RBP14.42□□□□□ -0.1
SCARB1-204ENST00000535005 CPA1P15085 419 aa14.42□□□□□ -0.1
SCARB1-204ENST00000535005 NOVP48745 357 aa14.42□□□□□ -0.1
SCARB1-204ENST00000535005 MAP3K11Q16584 847 aa14.42□□□□□ -0.1
SCARB1-204ENST00000535005 ABCB5Q2M3G0 1257 aa14.42□□□□□ -0.1
SCARB1-204ENST00000535005 TMEM179Q6ZVK1 233 aa14.42□□□□□ -0.1
SCARB1-204ENST00000535005 IQCA1Q86XH1 822 aa14.42□□□□□ -0.1
SCARB1-204ENST00000535005 IGDCC4Q8TDY8 1250 aa14.42□□□□□ -0.1
SCARB1-204ENST00000535005 ANKS1AQ92625 1134 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms