RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 MAP3K1Q13233 1512 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 MYOM3Q5VTT5 1437 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 CCDC7Q96M83 1385 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 C1QTNF9BB2RNN3 333 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 DLGAP3O95886 979 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 BMP3P12645 472 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 ATP2B1P20020 1258 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 NOS3P29474 1203 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 GRK4P32298 578 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 PREPP48147 710 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 NASPP49321 788 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-216ENST00000534389 YARSP54577 528 aaKnown RBP4.04□□□□□ -1.76
CSDE1-216ENST00000534389 PTPN11Q06124 597 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-216ENST00000534389 MAP7Q14244 749 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 MBTPS1Q14703 1052 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 GPAT2Q6NUI2 795 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 PAOXQ6QHF9 649 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 ARHGAP27Q6ZUM4 889 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 REC114Q7Z4M0 266 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 SMYD4Q8IYR2 804 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-216ENST00000534389 PHACTR4Q8IZ21 702 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 GIMAP7Q8NHV1 300 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 FBXO27Q8NI29 283 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 GAL3ST3Q96A11 431 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 ANAPC16Q96DE5 110 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 ANTXR1Q9H6X2 564 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 SUGCTQ9HAC7 445 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 BRMS1Q9HCU9 246 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 PPP1R9AQ9ULJ8 1098 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 HIF3AQ9Y2N7 669 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 PCDHB14Q9Y5E9 798 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 SYNJ1O43426 1573 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 NCOA1Q15788 1441 aa4.04□□□□□ -1.76
CSDE1-216ENST00000534389 DHX29Q7Z478 1369 aaKnown RBP4.03□□□□□ -1.76
CSDE1-216ENST00000534389 KDM2BQ8NHM5 1336 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-216ENST00000534389 FAM95CA0A1B0GW59 222 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 FANCGO15287 622 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 TMPRSS2O15393 492 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 CILPO75339 1184 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 STK10O94804 968 aaKnown RBP4.03□□□□□ -1.76
CSDE1-216ENST00000534389 IMPDH2P12268 514 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 GTF2F1P35269 517 aaKnown RBP eCLIP4.03□□□□□ -1.76
CSDE1-216ENST00000534389 ERVK-24P63145 666 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 DMTNQ08495 405 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 RAD51AP2Q09MP3 1159 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 COL9A2Q14055 689 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-216ENST00000534389 ADGRE1Q14246 886 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 INPP5AQ14642 412 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 TTLL4Q14679 1199 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 PPP2R5EQ16537 467 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 UVSSAQ2YD98 709 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 ZC3H12AQ5D1E8 599 aaKnown RBP4.03□□□□□ -1.76
CSDE1-216ENST00000534389 UTP14CQ5TAP6 766 aaKnown RBP4.03□□□□□ -1.76
CSDE1-216ENST00000534389 CCDC81Q6ZN84 652 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 BEND4Q6ZU67 534 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 XAGE3Q8WTP9 111 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 FBLIM1Q8WUP2 373 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 EAF1Q96JC9 268 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-216ENST00000534389 C8orf37Q96NL8 207 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 FANCD2OSQ96PS1 177 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 NRSN2Q9GZP1 204 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 PRKAG2Q9UGJ0 569 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 PCOLCE2Q9UKZ9 415 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 ACTL7BQ9Y614 415 aa4.03□□□□□ -1.76
CSDE1-216ENST00000534389 AQRO60306 1485 aaKnown RBP eCLIP4.03□□□□□ -1.763e-7■■■□□ 17
CSDE1-216ENST00000534389 ERICH3Q5RHP9 1530 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 TM4SF5O14894 197 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 U2SURPO15042 1029 aaKnown RBP4.02□□□□□ -1.77
CSDE1-216ENST00000534389 GREM1O60565 184 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 OFD1O75665 1012 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 HTR3BO95264 441 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 NFICP08651 508 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 RAG1P15918 1043 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 ZSCAN20P17040 1043 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-216ENST00000534389 MAP4P27816 1152 aaKnown RBP4.02□□□□□ -1.77
CSDE1-216ENST00000534389 CDK8P49336 464 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 EIF6P56537 245 aaKnown RBP4.02□□□□□ -1.77
CSDE1-216ENST00000534389 ZBTB37Q5TC79 503 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 GAS2L3Q86XJ1 694 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 HID1Q8IV36 788 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 C2CD4AQ8NCU7 369 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-216ENST00000534389 RNF214Q8ND24 703 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 FAM13CQ8NE31 585 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 SREK1Q8WXA9 508 aaKnown RBP4.02□□□□□ -1.77
CSDE1-216ENST00000534389 SRRTQ9BXP5 876 aaKnown RBP4.02□□□□□ -1.77
CSDE1-216ENST00000534389 WNT10AQ9GZT5 417 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 GINM1Q9NU53 330 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 FAM105AQ9NUU6 356 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 CRIM1Q9NZV1 1036 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 STOML1Q9UBI4 398 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 STRIP2Q9ULQ0 834 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 PHLDB1Q86UU1 1377 aa4.02□□□□□ -1.77
CSDE1-216ENST00000534389 SYNGAP1Q96PV0 1343 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 FAM221AA4D161 298 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 GOLGA6L3A6NEY3 463 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 VGLL3A8MV65 326 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 MSTNO14793 375 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 PLIN1O60240 522 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 CANXP27824 592 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms