RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 TXNRD2Q9NNW7 524 aa26.15■■□□□ 1.78
SSH3-211ENST00000534112 PALD1Q9ULE6 856 aa26.15■■□□□ 1.78
SSH3-211ENST00000534112 USP17L10C9JJH3 530 aa26.14■■□□□ 1.78
SSH3-211ENST00000534112 SOX1O00570 391 aaPredicted RBP26.14■■□□□ 1.78
SSH3-211ENST00000534112 MNX1P50219 401 aaPredicted RBP26.14■■□□□ 1.78
SSH3-211ENST00000534112 HERVK_113P62684 666 aa26.14■■□□□ 1.78
SSH3-211ENST00000534112 POLA2Q14181 598 aa26.14■■□□□ 1.78
SSH3-211ENST00000534112 SHROOM1Q2M3G4 852 aaPredicted RBP26.14■■□□□ 1.78
SSH3-211ENST00000534112 CRACR2BQ8N4Y2 399 aaPredicted RBP26.14■■□□□ 1.78
SSH3-211ENST00000534112 TRIM34Q9BYJ4 488 aa26.14■■□□□ 1.78
SSH3-211ENST00000534112 NBPF3Q9H094 633 aa26.14■■□□□ 1.78
SSH3-211ENST00000534112 GINM1Q9NU53 330 aa26.14■■□□□ 1.78
SSH3-211ENST00000534112 C7orf61Q8IZ16 206 aa26.13■■□□□ 1.77
SSH3-211ENST00000534112 NUDT12Q9BQG2 462 aa26.13■■□□□ 1.77
SSH3-211ENST00000534112 GDF11O95390 407 aa26.12■■□□□ 1.77
SSH3-211ENST00000534112 XRCC5P13010 732 aaKnown RBP26.12■■□□□ 1.77
SSH3-211ENST00000534112 OS9Q13438 667 aaPredicted RBP26.12■■□□□ 1.77
SSH3-211ENST00000534112 MAP3K21Q5TCX8 1036 aa26.12■■□□□ 1.77
SSH3-211ENST00000534112 TMEM57Q8N5G2 664 aa26.12■■□□□ 1.77
SSH3-211ENST00000534112 SSH3Q8TE77 659 aa26.12■■□□□ 1.77
SSH3-211ENST00000534112 LRCH3Q96II8 777 aa26.12■■□□□ 1.77
SSH3-211ENST00000534112 ZNF512BQ96KM6 892 aaPredicted RBP26.12■■□□□ 1.77
SSH3-211ENST00000534112 GDF15Q99988 308 aa26.12■■□□□ 1.77
SSH3-211ENST00000534112 RBPJLQ9UBG7 517 aa26.12■■□□□ 1.77
SSH3-211ENST00000534112 OGDHLQ9ULD0 1010 aa26.12■■□□□ 1.77
SSH3-211ENST00000534112 CCER2I3L3R5 266 aa26.11■■□□□ 1.77
SSH3-211ENST00000534112 ATP8B2P98198 1209 aa26.11■■□□□ 1.77
SSH3-211ENST00000534112 SOCS4Q8WXH5 440 aa26.11■■□□□ 1.77
SSH3-211ENST00000534112 PIH1D3Q9NQM4 214 aaKnown RBP26.11■■□□□ 1.77
SSH3-211ENST00000534112 SAP30BPQ9UHR5 308 aaKnown RBP26.11■■□□□ 1.77
SSH3-211ENST00000534112 ZBTB21Q9ULJ3 1066 aa26.11■■□□□ 1.77
SSH3-211ENST00000534112 ZMYND8Q9ULU4 1186 aaPredicted RBP26.11■■□□□ 1.77
SSH3-211ENST00000534112 IGSF3O75054 1194 aa26.1■■□□□ 1.77
SSH3-211ENST00000534112 SURF6O75683 361 aaKnown RBP26.1■■□□□ 1.77
SSH3-211ENST00000534112 PRKAR2AP13861 404 aaKnown RBP26.1■■□□□ 1.77
SSH3-211ENST00000534112 BMP8BP34820 402 aa26.1■■□□□ 1.77
SSH3-211ENST00000534112 ZAP70P43403 619 aa26.1■■□□□ 1.77
SSH3-211ENST00000534112 Q3C1V9 767 aa26.1■■□□□ 1.77
SSH3-211ENST00000534112 C11orf49Q9H6J7 331 aa26.1■■□□□ 1.77
SSH3-211ENST00000534112 EMILIN3Q9NT22 766 aa26.1■■□□□ 1.77
SSH3-211ENST00000534112 HLA-DOAP06340 250 aa26.09■■□□□ 1.77
SSH3-211ENST00000534112 MAPK4P31152 587 aa26.09■■□□□ 1.77
SSH3-211ENST00000534112 DYNLL1P63167 89 aaKnown RBP26.09■■□□□ 1.77
SSH3-211ENST00000534112 ERVK-9P63128 1117 aa26.08■■□□□ 1.77
SSH3-211ENST00000534112 ERVK-24P63145 666 aa26.08■■□□□ 1.77
SSH3-211ENST00000534112 PDE3AQ14432 1141 aa26.08■■□□□ 1.77
SSH3-211ENST00000534112 ZKSCAN2Q63HK3 967 aa26.08■■□□□ 1.77
SSH3-211ENST00000534112 USP6NLQ92738 828 aa26.08■■□□□ 1.77
SSH3-211ENST00000534112 ATAD5Q96QE3 1844 aa26.08■■□□□ 1.77
SSH3-211ENST00000534112 COL6A3P12111 3177 aa26.07■■□□□ 1.76
SSH3-211ENST00000534112 CYP7A1P22680 504 aa26.07■■□□□ 1.76
SSH3-211ENST00000534112 USP17L2Q6R6M4 530 aa26.07■■□□□ 1.76
SSH3-211ENST00000534112 POTEEQ6S8J3 1075 aa26.07■■□□□ 1.76
SSH3-211ENST00000534112 CCAR1Q8IX12 1150 aaKnown RBP26.07■■□□□ 1.76
SSH3-211ENST00000534112 TRMT44Q8IYL2 757 aaKnown RBP26.07■■□□□ 1.76
SSH3-211ENST00000534112 GTF3C2Q8WUA4 911 aaPredicted RBP26.07■■□□□ 1.76
SSH3-211ENST00000534112 PORCNQ9H237 461 aa26.07■■□□□ 1.76
SSH3-211ENST00000534112 DBNLQ9UJU6 430 aaKnown RBP26.07■■□□□ 1.76
SSH3-211ENST00000534112 SIPA1L1O43166 1804 aa26.07■■□□□ 1.76
SSH3-211ENST00000534112 ZKSCAN1P17029 563 aaPredicted RBP26.06■■□□□ 1.76
SSH3-211ENST00000534112 CACNB2Q08289 660 aaPredicted RBP26.06■■□□□ 1.76
SSH3-211ENST00000534112 GPR142Q7Z601 462 aa26.06■■□□□ 1.76
SSH3-211ENST00000534112 PAGR1Q9BTK6 254 aa26.06■■□□□ 1.76
SSH3-211ENST00000534112 NOP58Q9Y2X3 529 aaKnown RBP26.06■■□□□ 1.76
SSH3-211ENST00000534112 GH2P01242 217 aa26.05■■□□□ 1.76
SSH3-211ENST00000534112 SYN1P17600 705 aa26.05■■□□□ 1.76
SSH3-211ENST00000534112 MORN1Q5T089 497 aa26.05■■□□□ 1.76
SSH3-211ENST00000534112 PLEKHH3Q7Z736 793 aa26.05■■□□□ 1.76
SSH3-211ENST00000534112 CCDC8Q9H0W5 538 aaPredicted RBP26.05■■□□□ 1.76
SSH3-211ENST00000534112 C1orf115Q9H7X2 142 aa26.05■■□□□ 1.76
SSH3-211ENST00000534112 TLR7Q9NYK1 1049 aaKnown RBP26.05■■□□□ 1.76
SSH3-211ENST00000534112 A0A0C4DFX4 3053 aa26.05■■□□□ 1.76
SSH3-211ENST00000534112 IDH1O75874 414 aaKnown RBP26.04■■□□□ 1.76
SSH3-211ENST00000534112 RGS2P41220 211 aa26.04■■□□□ 1.76
SSH3-211ENST00000534112 CCL14Q16627 93 aa26.04■■□□□ 1.76
SSH3-211ENST00000534112 MIGA1Q8NAN2 632 aa26.04■■□□□ 1.76
SSH3-211ENST00000534112 SLC17A8Q8NDX2 589 aa26.04■■□□□ 1.76
SSH3-211ENST00000534112 PFASO15067 1338 aa26.04■■□□□ 1.76
SSH3-211ENST00000534112 PLXNB2O15031 1838 aa26.04■■□□□ 1.76
SSH3-211ENST00000534112 ALPK3Q96L96 1907 aa26.04■■□□□ 1.76
SSH3-211ENST00000534112 MAGEA10P43363 369 aaPredicted RBP26.03■■□□□ 1.76
SSH3-211ENST00000534112 TATDN1Q6P1N9 297 aa26.03■■□□□ 1.76
SSH3-211ENST00000534112 EAF2Q96CJ1 260 aaPredicted RBP26.03■■□□□ 1.76
SSH3-211ENST00000534112 CCND3P30281 292 aaPredicted RBP26.02■■□□□ 1.76
SSH3-211ENST00000534112 USP5P45974 858 aa26.02■■□□□ 1.76
SSH3-211ENST00000534112 LHX8Q68G74 356 aa26.02■■□□□ 1.76
SSH3-211ENST00000534112 CERS3Q8IU89 383 aa26.02■■□□□ 1.76
SSH3-211ENST00000534112 C12orf42Q96LP6 360 aa26.02■■□□□ 1.76
SSH3-211ENST00000534112 USP17L15C9J2P7 530 aa26.01■■□□□ 1.75
SSH3-211ENST00000534112 USP17L13C9JLJ4 530 aa26.01■■□□□ 1.75
SSH3-211ENST00000534112 USP17L11C9JVI0 530 aa26.01■■□□□ 1.75
SSH3-211ENST00000534112 USP17L18D6R9N7 530 aa26.01■■□□□ 1.75
SSH3-211ENST00000534112 USP17L22D6RA61 530 aa26.01■■□□□ 1.75
SSH3-211ENST00000534112 USP17L17D6RBQ6 530 aa26.01■■□□□ 1.75
SSH3-211ENST00000534112 USP17L19D6RCP7 530 aa26.01■■□□□ 1.75
SSH3-211ENST00000534112 USP17L20D6RJB6 530 aa26.01■■□□□ 1.75
SSH3-211ENST00000534112 COL6A1P12109 1028 aa26.01■■□□□ 1.75
SSH3-211ENST00000534112 USP17L24Q0WX57 530 aa26.01■■□□□ 1.75
SSH3-211ENST00000534112 ZYXQ15942 572 aaKnown RBP26.01■■□□□ 1.75
SSH3-211ENST00000534112 GPR153Q6NV75 609 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms