RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 NOL10Q9BSC4 688 aaKnown RBP11.71□□□□□ -0.53
SSBP3-215ENST00000533946 OSBPP22059 807 aa11.7□□□□□ -0.54
SSBP3-215ENST00000533946 MLLT1Q03111 559 aaPredicted RBP11.7□□□□□ -0.54
SSBP3-215ENST00000533946 MTFR1Q15390 333 aa11.7□□□□□ -0.54
SSBP3-215ENST00000533946 ZYXQ15942 572 aaKnown RBP11.7□□□□□ -0.54
SSBP3-215ENST00000533946 ZNF280CQ8ND82 737 aa11.7□□□□□ -0.54
SSBP3-215ENST00000533946 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.7□□□□□ -0.54
SSBP3-215ENST00000533946 SEC62Q99442 399 aaKnown RBP11.7□□□□□ -0.54
SSBP3-215ENST00000533946 DCP1AQ9NPI6 582 aaPredicted RBP11.7□□□□□ -0.54
SSBP3-215ENST00000533946 EMILIN3Q9NT22 766 aa11.7□□□□□ -0.54
SSBP3-215ENST00000533946 ZBTB21Q9ULJ3 1066 aa11.7□□□□□ -0.54
SSBP3-215ENST00000533946 PLXNB2O15031 1838 aa11.7□□□□□ -0.54
SSBP3-215ENST00000533946 DNAH12Q6ZR08 3092 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 A0A1W2PRG0 241 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 USP17L5A8MUK1 530 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 IRX6P78412 446 aaPredicted RBP11.69□□□□□ -0.54
SSBP3-215ENST00000533946 PRKCZQ05513 592 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 GABPAQ06546 454 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 PKN2Q16513 984 aaKnown RBP11.69□□□□□ -0.54
SSBP3-215ENST00000533946 SIAH1Q8IUQ4 282 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 FOXP4Q8IVH2 680 aaPredicted RBP11.69□□□□□ -0.54
SSBP3-215ENST00000533946 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 CRACR2BQ8N4Y2 399 aaPredicted RBP11.69□□□□□ -0.54
SSBP3-215ENST00000533946 ANKRD13CQ8N6S4 541 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 EXOC6Q8TAG9 804 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 PI4K2BQ8TCG2 481 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 P2RX7Q99572 595 aaKnown RBP11.69□□□□□ -0.54
SSBP3-215ENST00000533946 TXNRD2Q9NNW7 524 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 PCDH10Q9P2E7 1040 aa11.69□□□□□ -0.54
SSBP3-215ENST00000533946 HERC5Q9UII4 1024 aaKnown RBP11.69□□□□□ -0.54
SSBP3-215ENST00000533946 SALL3Q9BXA9 1300 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 M0R2C6 588 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 IGHDP01880 384 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 PLCG2P16885 1265 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 SEPT2Q15019 361 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 TATDN1Q6P1N9 297 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 OSBP2Q969R2 916 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 ARMC5Q96C12 935 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 ZNF333Q96JL9 665 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 ASCC2Q9H1I8 757 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-215ENST00000533946 DHX36Q9H2U1 1008 aaKnown RBP11.68□□□□□ -0.54
SSBP3-215ENST00000533946 ZCCHC17Q9NP64 241 aaKnown RBP11.68□□□□□ -0.54
SSBP3-215ENST00000533946 MCM9Q9NXL9 1143 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 AGTPBP1Q9UPW5 1226 aa11.68□□□□□ -0.54
SSBP3-215ENST00000533946 FMNL1O95466 1100 aaPredicted RBP11.67□□□□□ -0.54
SSBP3-215ENST00000533946 ELNP15502 786 aa11.67□□□□□ -0.54
SSBP3-215ENST00000533946 BACE1P56817 501 aa11.67□□□□□ -0.54
SSBP3-215ENST00000533946 TRIM32Q13049 653 aa11.67□□□□□ -0.54
SSBP3-215ENST00000533946 Q3C1V9 767 aa11.67□□□□□ -0.54
SSBP3-215ENST00000533946 SH3D19Q5HYK7 790 aa11.67□□□□□ -0.54
SSBP3-215ENST00000533946 FASTKD5Q7L8L6 764 aaKnown RBP11.67□□□□□ -0.54
SSBP3-215ENST00000533946 WDR18Q9BV38 432 aa11.67□□□□□ -0.54
SSBP3-215ENST00000533946 ECHDC1Q9NTX5 307 aa11.67□□□□□ -0.54
SSBP3-215ENST00000533946 SERPINB13Q9UIV8 391 aa11.67□□□□□ -0.54
SSBP3-215ENST00000533946 RANBP2P49792 3224 aaKnown RBP11.66□□□□□ -0.54
SSBP3-215ENST00000533946 USP17L12C9JPN9 530 aa11.66□□□□□ -0.54
SSBP3-215ENST00000533946 USP17L21D6R901 530 aa11.66□□□□□ -0.54
SSBP3-215ENST00000533946 FOXP2O15409 715 aa11.66□□□□□ -0.54
SSBP3-215ENST00000533946 POLR3DP05423 398 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-215ENST00000533946 AKR1B1P15121 316 aa11.66□□□□□ -0.54
SSBP3-215ENST00000533946 RAB3GAP1Q15042 981 aa11.66□□□□□ -0.54
SSBP3-215ENST00000533946 TTF1Q15361 905 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-215ENST00000533946 PARK7Q99497 189 aaKnown RBP11.66□□□□□ -0.54
SSBP3-215ENST00000533946 EPB41L4AQ9HCS5 686 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-215ENST00000533946 INCENPQ9NQS7 918 aa11.66□□□□□ -0.54
SSBP3-215ENST00000533946 SRRDQ9UH36 339 aa11.66□□□□□ -0.54
SSBP3-215ENST00000533946 TACC3Q9Y6A5 838 aa11.66□□□□□ -0.54
SSBP3-215ENST00000533946 RLFQ13129 1914 aa11.66□□□□□ -0.54
SSBP3-215ENST00000533946 CNMDO75829 334 aa11.65□□□□□ -0.54
SSBP3-215ENST00000533946 CERKLQ49MI3 558 aaPredicted RBP11.65□□□□□ -0.54
SSBP3-215ENST00000533946 SLC9C1Q4G0N8 1177 aa11.65□□□□□ -0.54
SSBP3-215ENST00000533946 CTR9Q6PD62 1173 aa11.65□□□□□ -0.54
SSBP3-215ENST00000533946 CCDC129Q6ZRS4 1044 aa11.65□□□□□ -0.54
SSBP3-215ENST00000533946 NKX2-3Q8TAU0 364 aa11.65□□□□□ -0.54
SSBP3-215ENST00000533946 SHISA4Q96DD7 197 aa11.65□□□□□ -0.54
SSBP3-215ENST00000533946 STRBPQ96SI9 672 aaKnown RBP11.65□□□□□ -0.54
SSBP3-215ENST00000533946 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.65□□□□□ -0.54
SSBP3-215ENST00000533946 CRNKL1Q9BZJ0 848 aaKnown RBP11.65□□□□□ -0.54
SSBP3-215ENST00000533946 RBPJLQ9UBG7 517 aa11.65□□□□□ -0.54
SSBP3-215ENST00000533946 SLC4A4Q9Y6R1 1079 aa11.65□□□□□ -0.54
SSBP3-215ENST00000533946 MYH8P13535 1937 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 RBBP6Q7Z6E9 1792 aaKnown RBP11.64□□□□□ -0.55
SSBP3-215ENST00000533946 MYPNQ86TC9 1320 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 GSG1L2A8MUP6 293 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 USP17L10C9JJH3 530 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 HLA-DOAP06340 250 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 ASNSP08243 561 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 FLT3LGP49771 235 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 UBE3CQ15386 1083 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 ABCB5Q2M3G0 1257 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 ANKRD45Q5TZF3 282 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 C12orf60Q5U649 245 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 KBTBD3Q8NAB2 608 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 PROCA1Q8NCQ7 364 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-215ENST00000533946 SMCR8Q8TEV9 937 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-215ENST00000533946 EHD4Q9H223 541 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 PORCNQ9H237 461 aa11.64□□□□□ -0.55
SSBP3-215ENST00000533946 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
SSBP3-215ENST00000533946 CDK8P49336 464 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms