RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 NWD2Q9ULI1 1742 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 SKILP12757 684 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 CMA1P23946 247 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 STX17P56962 302 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 TFAP4Q01664 338 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 OLFM4Q6UX06 510 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 DCP1AQ9NPI6 582 aaPredicted RBP18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 COL4A1P02462 1669 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 EIF6P56537 245 aaKnown RBP18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 FAM177A1Q8N128 213 aaPredicted RBP18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 SERTAD1Q9UHV2 236 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 VPS72Q15906 364 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 SEPT12Q8IYM1 358 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 KIAA1524Q8TCG1 905 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 TMX1Q9H3N1 280 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 SPEF2Q9C093 1822 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 MCM7P33993 719 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 EARS2Q5JPH6 523 aaKnown RBP18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 PIK3AP1Q6ZUJ8 805 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 SH3RF3Q8TEJ3 882 aaPredicted RBP18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 PCDHA5Q9Y5H7 936 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 MYH3P11055 1940 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 PNPLA7Q6ZV29 1317 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 COL16A1Q07092 1604 aaPredicted RBP18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 A0A1W2PQ27 194 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 A0A1W2PQ64 194 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 A0A1W2PQD8 194 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 VWA3AA6NCI4 1184 aa18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 RBM43Q6ZSC3 357 aaKnown RBP18.29■□□□□ 0.52
ATP2C1-224ENST00000533801 G3V3G9 751 aa18.28■□□□□ 0.52
ATP2C1-224ENST00000533801 DCAF8Q5TAQ9 597 aa18.28■□□□□ 0.52
ATP2C1-224ENST00000533801 TMTC2Q8N394 836 aa18.28■□□□□ 0.52
ATP2C1-224ENST00000533801 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.28■□□□□ 0.52
ATP2C1-224ENST00000533801 EPSTI1Q96J88 318 aa18.28■□□□□ 0.52
ATP2C1-224ENST00000533801 ANKRD2Q9GZV1 360 aa18.28■□□□□ 0.52
ATP2C1-224ENST00000533801 COL1A1P02452 1464 aaPredicted RBP18.28■□□□□ 0.52
ATP2C1-224ENST00000533801 TNNT1P13805 278 aa18.28■□□□□ 0.52
ATP2C1-224ENST00000533801 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
ATP2C1-224ENST00000533801 SRCAPQ6ZRS2 3230 aa18.28■□□□□ 0.52
ATP2C1-224ENST00000533801 TOB1P50616 345 aaPredicted RBP18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 PDE4BQ07343 736 aa18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 PLA2G4DQ86XP0 818 aa18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 UIMC1Q96RL1 719 aa18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 V9GYY5 206 aaPredicted RBP18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 PHLPP1O60346 1717 aa18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 USP27XA6NNY8 438 aa18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 PRR29P0C7W0 189 aa18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 TICAM2Q86XR7 235 aa18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 CSRNP2Q9H175 543 aa18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 LRRC4BQ9NT99 713 aa18.27■□□□□ 0.52
ATP2C1-224ENST00000533801 TSPY3P0CV98 308 aa18.27■□□□□ 0.51
ATP2C1-224ENST00000533801 TSPY8P0CW00 308 aa18.27■□□□□ 0.51
ATP2C1-224ENST00000533801 SMYD4Q8IYR2 804 aaPredicted RBP18.27■□□□□ 0.51
ATP2C1-224ENST00000533801 BRMS1Q9HCU9 246 aa18.27■□□□□ 0.51
ATP2C1-224ENST00000533801 MSL1Q68DK7 614 aa18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 AMOTL1Q8IY63 956 aa18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 ZNF444Q8N0Y2 327 aaPredicted RBP18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 TRIM75PA6NK02 468 aa18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 FBXO33Q7Z6M2 555 aa18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 FBXL16Q8N461 479 aa18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 AFF2P51816 1311 aa18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 WDR19Q8NEZ3 1342 aa18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 KRT2P35908 639 aa18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 PTPAQ15257 358 aa18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 HEATR3Q7Z4Q2 680 aa18.26■□□□□ 0.51
ATP2C1-224ENST00000533801 PES1O00541 588 aaKnown RBP18.25■□□□□ 0.51
ATP2C1-224ENST00000533801 WNT7AO00755 349 aa18.25■□□□□ 0.51
ATP2C1-224ENST00000533801 NLRP12P59046 1061 aa18.25■□□□□ 0.51
ATP2C1-224ENST00000533801 MAPK8IP1Q9UQF2 711 aa18.25■□□□□ 0.51
ATP2C1-224ENST00000533801 TPM3P06753 285 aa18.25■□□□□ 0.51
ATP2C1-224ENST00000533801 DHX8Q14562 1220 aaKnown RBP18.25■□□□□ 0.51
ATP2C1-224ENST00000533801 NBPF11Q86T75 865 aa18.25■□□□□ 0.51
ATP2C1-224ENST00000533801 STAG2Q8N3U4 1231 aa18.25■□□□□ 0.51
ATP2C1-224ENST00000533801 FANCLQ9NW38 375 aa18.25■□□□□ 0.51
ATP2C1-224ENST00000533801 RTL9Q8NET4 1388 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 BAZ2AQ9UIF9 1905 aaKnown RBP18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 RIOK3O14730 519 aaKnown RBP18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 UBASH3AP57075 661 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 METTL16Q86W50 562 aaKnown RBP18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 MAP3K14Q99558 947 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 BLZF1Q9H2G9 400 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 UTRNP46939 3433 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 RILPL1Q5EBL4 403 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 KRBA2Q6ZNG9 492 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 SRBD1Q8N5C6 995 aaKnown RBP18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 GJD4Q96KN9 370 aaPredicted RBP18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 MYH7P12883 1935 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 CUTAO60888 179 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 U2AF2P26368 475 aaKnown RBP eCLIP18.24■□□□□ 0.515e-6■■■□□ 19.2
ATP2C1-224ENST00000533801 CPLX3Q8WVH0 158 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 MXD3Q9BW11 206 aa18.24■□□□□ 0.51
ATP2C1-224ENST00000533801 ATRNO75882 1429 aa18.23■□□□□ 0.51
ATP2C1-224ENST00000533801 SERPINB2P05120 415 aa18.23■□□□□ 0.51
ATP2C1-224ENST00000533801 GPSM2P81274 684 aa18.23■□□□□ 0.51
ATP2C1-224ENST00000533801 FANCCQ00597 558 aa18.23■□□□□ 0.51
ATP2C1-224ENST00000533801 LRRC8AQ8IWT6 810 aa18.23■□□□□ 0.51
ATP2C1-224ENST00000533801 PLCD1P51178 756 aa18.23■□□□□ 0.51
ATP2C1-224ENST00000533801 SEC23AQ15436 765 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms