RNA–Protein interactions for RNA: ENST00000531432.1

PPP6R3-223, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 3

Gene PPP6R3, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-223	ENST00000531432	UPK3BL1	B0FP48	263 aa		10.13	□□□□□ -0.79
PPP6R3-223	ENST00000531432	UPK3BL2	E5RIL1	263 aa		10.13	□□□□□ -0.79
PPP6R3-223	ENST00000531432	DNAJA2	O60884	412 aa		10.13	□□□□□ -0.79
PPP6R3-223	ENST00000531432	CST3	P01034	146 aa	Predicted RBP	10.13	□□□□□ -0.79
PPP6R3-223	ENST00000531432	MCM4	P33991	863 aa		10.13	□□□□□ -0.79
PPP6R3-223	ENST00000531432	SLC6A19	Q695T7	634 aa		10.13	□□□□□ -0.79
PPP6R3-223	ENST00000531432	GK5	Q6ZS86	529 aa		10.13	□□□□□ -0.79
PPP6R3-223	ENST00000531432	MCAT	Q8IVS2	390 aa	Known RBP	10.13	□□□□□ -0.79
PPP6R3-223	ENST00000531432	GPRASP2	Q96D09	838 aa		10.13	□□□□□ -0.79
PPP6R3-223	ENST00000531432	PRDM10	Q9NQV6	1147 aa		10.13	□□□□□ -0.79
PPP6R3-223	ENST00000531432	ATE1	O95260	518 aa		10.12	□□□□□ -0.79
PPP6R3-223	ENST00000531432	TGFB1	P01137	390 aa		10.12	□□□□□ -0.79
PPP6R3-223	ENST00000531432	GJA8	P48165	433 aa		10.12	□□□□□ -0.79
PPP6R3-223	ENST00000531432	XAGE3	Q8WTP9	111 aa		10.12	□□□□□ -0.79
PPP6R3-223	ENST00000531432	OSBPL1A	Q9BXW6	950 aa		10.12	□□□□□ -0.79
PPP6R3-223	ENST00000531432	EHMT1	Q9H9B1	1298 aa		10.12	□□□□□ -0.79
PPP6R3-223	ENST00000531432	ATG3	Q9NT62	314 aa		10.12	□□□□□ -0.79
PPP6R3-223	ENST00000531432	SLITRK5	O94991	958 aa		10.11	□□□□□ -0.79
PPP6R3-223	ENST00000531432	ZNF165	P49910	485 aa		10.11	□□□□□ -0.79
PPP6R3-223	ENST00000531432	REXO1	Q8N1G1	1221 aa	Known RBP	10.11	□□□□□ -0.79
PPP6R3-223	ENST00000531432	FAM13C	Q8NE31	585 aa		10.11	□□□□□ -0.79
PPP6R3-223	ENST00000531432	GIMAP7	Q8NHV1	300 aa		10.11	□□□□□ -0.79
PPP6R3-223	ENST00000531432	RASGRP4	Q8TDF6	673 aa		10.11	□□□□□ -0.79
PPP6R3-223	ENST00000531432	KLHL3	Q9UH77	587 aa		10.11	□□□□□ -0.79
PPP6R3-223	ENST00000531432	INPP5F	Q9Y2H2	1132 aa		10.11	□□□□□ -0.79
PPP6R3-223	ENST00000531432	CHURC1-FNTB	B4DL54	471 aa		10.1	□□□□□ -0.79
PPP6R3-223	ENST00000531432	MFSD2A	Q8NA29	543 aa		10.1	□□□□□ -0.79
PPP6R3-223	ENST00000531432	MIPEP	Q99797	713 aa		10.1	□□□□□ -0.79
PPP6R3-223	ENST00000531432	METTL22	Q9BUU2	404 aa	Predicted RBP	10.1	□□□□□ -0.79
PPP6R3-223	ENST00000531432	GINM1	Q9NU53	330 aa		10.1	□□□□□ -0.79
PPP6R3-223	ENST00000531432	CYP27A1	Q02318	531 aa		10.09	□□□□□ -0.79
PPP6R3-223	ENST00000531432	NPM2	Q86SE8	214 aa	Known RBP	10.09	□□□□□ -0.79
PPP6R3-223	ENST00000531432	RIN3	Q8TB24	985 aa		10.09	□□□□□ -0.79
PPP6R3-223	ENST00000531432	RBAK-RBAKDN	I3L0D1	243 aa		10.08	□□□□□ -0.8
PPP6R3-223	ENST00000531432	EOMES	O95936	686 aa		10.08	□□□□□ -0.8
PPP6R3-223	ENST00000531432	CYP27C1	Q4G0S4	372 aa		10.08	□□□□□ -0.8
PPP6R3-223	ENST00000531432	DUSP27	Q5VZP5	1158 aa		10.08	□□□□□ -0.8
PPP6R3-223	ENST00000531432	FAM214B	Q7L5A3	538 aa		10.08	□□□□□ -0.8
PPP6R3-223	ENST00000531432	ANTXR1	Q9H6X2	564 aa		10.08	□□□□□ -0.8
PPP6R3-223	ENST00000531432	PIM2	Q9P1W9	311 aa		10.08	□□□□□ -0.8
PPP6R3-223	ENST00000531432	RNF112	Q9ULX5	631 aa		10.08	□□□□□ -0.8
PPP6R3-223	ENST00000531432	EFR3B	Q9Y2G0	817 aa		10.08	□□□□□ -0.8
PPP6R3-223	ENST00000531432	LEMD3	Q9Y2U8	911 aa		10.08	□□□□□ -0.8
PPP6R3-223	ENST00000531432	SLC22A31	A6NKX4	558 aa		10.07	□□□□□ -0.8
PPP6R3-223	ENST00000531432	HOXA10	P31260	410 aa	Predicted RBP	10.07	□□□□□ -0.8
PPP6R3-223	ENST00000531432	CPSF6	Q16630	551 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
PPP6R3-223	ENST00000531432	TINF2	Q9BSI4	451 aa		10.07	□□□□□ -0.8
PPP6R3-223	ENST00000531432	CAPN10	Q9HC96	672 aa		10.07	□□□□□ -0.8
PPP6R3-223	ENST00000531432	ZNRF3	Q9ULT6	936 aa		10.07	□□□□□ -0.8
PPP6R3-223	ENST00000531432	PPT2	Q9UMR5	302 aa		10.07	□□□□□ -0.8
PPP6R3-223	ENST00000531432		U3KQE9	123 aa		10.07	□□□□□ -0.8
PPP6R3-223	ENST00000531432	SOX9	P48436	509 aa		10.06	□□□□□ -0.8
PPP6R3-223	ENST00000531432	YARS	P54577	528 aa	Known RBP	10.06	□□□□□ -0.8
PPP6R3-223	ENST00000531432	OVOS1	Q6IE37	1185 aa		10.06	□□□□□ -0.8
PPP6R3-223	ENST00000531432	LETMD1	Q6P1Q0	360 aa		10.06	□□□□□ -0.8
PPP6R3-223	ENST00000531432	SLFN12	Q8IYM2	578 aa		10.06	□□□□□ -0.8
PPP6R3-223	ENST00000531432	HEXIM2	Q96MH2	286 aa	Known RBP	10.06	□□□□□ -0.8
PPP6R3-223	ENST00000531432	CNTNAP4	Q9C0A0	1308 aa		10.06	□□□□□ -0.8
PPP6R3-223	ENST00000531432	SPATA32	Q96LK8	384 aa		10.05	□□□□□ -0.8
PPP6R3-223	ENST00000531432	LRRC4C	Q9HCJ2	640 aa		10.05	□□□□□ -0.8
PPP6R3-223	ENST00000531432	GMIP	Q9P107	970 aa		10.05	□□□□□ -0.8
PPP6R3-223	ENST00000531432	CYP26A1	O43174	497 aa		10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	NASP	P49321	788 aa	Predicted RBP	10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	COL9A2	Q14055	689 aa	Predicted RBP	10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	MLEC	Q14165	292 aa		10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	ARSH	Q5FYA8	562 aa		10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	CCDC81	Q6ZN84	652 aa		10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	CDH24	Q86UP0	819 aa		10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	DNAJB8	Q8NHS0	232 aa		10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	PPP1R13L	Q8WUF5	828 aa		10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	CYB5D2	Q8WUJ1	264 aa		10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	FERD3L	Q96RJ6	166 aa		10.04	□□□□□ -0.8
PPP6R3-223	ENST00000531432	MEIS3P2	A8K0S8	358 aa		10.03	□□□□□ -0.8
PPP6R3-223	ENST00000531432	MED26	O95402	600 aa		10.03	□□□□□ -0.8
PPP6R3-223	ENST00000531432	FOSL1	P15407	271 aa		10.03	□□□□□ -0.8
PPP6R3-223	ENST00000531432	ZMYM1	Q5SVZ6	1142 aa		10.03	□□□□□ -0.8
PPP6R3-223	ENST00000531432	FAM181A	Q8N9Y4	354 aa		10.03	□□□□□ -0.8
PPP6R3-223	ENST00000531432	TMEM40	Q8WWA1	233 aa		10.03	□□□□□ -0.8
PPP6R3-223	ENST00000531432	ATG4C	Q96DT6	458 aa		10.03	□□□□□ -0.8
PPP6R3-223	ENST00000531432	BAHD1	Q8TBE0	780 aa	Predicted RBP	10.02	□□□□□ -0.81
PPP6R3-223	ENST00000531432	KIF2C	Q99661	725 aa		10.02	□□□□□ -0.81
PPP6R3-223	ENST00000531432	CNNM2	Q9H8M5	875 aa		10.02	□□□□□ -0.81
PPP6R3-223	ENST00000531432	TPX2	Q9ULW0	747 aa	Known RBP	10.02	□□□□□ -0.81
PPP6R3-223	ENST00000531432	ATF4	P18848	351 aa	Predicted RBP	10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	SSTR4	P31391	388 aa		10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	OXCT1	P55809	520 aa		10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	CDCP2	Q5VXM1	449 aa		10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	FBXW10	Q5XX13	1052 aa		10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	PHACTR4	Q8IZ21	702 aa		10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	CCDC74B	Q96LY2	380 aa		10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	GTF2IRD1	Q9UHL9	959 aa		10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	CEP131	Q9UPN4	1083 aa		10.01	□□□□□ -0.81
PPP6R3-223	ENST00000531432	COBL	O75128	1261 aa		10	□□□□□ -0.81
PPP6R3-223	ENST00000531432	IMPDH2	P12268	514 aa		10	□□□□□ -0.81
PPP6R3-223	ENST00000531432	RAG1	P15918	1043 aa		10	□□□□□ -0.81
PPP6R3-223	ENST00000531432	POLR2B	P30876	1174 aa	Known RBP	10	□□□□□ -0.81
PPP6R3-223	ENST00000531432	CD97	P48960	835 aa		10	□□□□□ -0.81
PPP6R3-223	ENST00000531432	MSMP	Q1L6U9	139 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms