RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 NFIXQ14938 502 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 CRY2Q49AN0 593 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 SHC4Q6S5L8 630 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 DZIP1Q86YF9 867 aaKnown RBP12.31□□□□□ -0.44
PUF60-213ENST00000528999 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 CCDC144CPQ8IYA2 1237 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 CNBD1Q8NA66 436 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
PUF60-213ENST00000528999 RBM17Q96I25 401 aaKnown RBP12.31□□□□□ -0.44
PUF60-213ENST00000528999 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
PUF60-213ENST00000528999 MYL10Q9BUA6 226 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 TTC12Q9H892 705 aaPredicted RBP12.31□□□□□ -0.44
PUF60-213ENST00000528999 GJB4Q9NTQ9 266 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 KCNH3Q9ULD8 1083 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 SRPRBQ9Y5M8 271 aaKnown RBP12.31□□□□□ -0.44
PUF60-213ENST00000528999 PLCG2P16885 1265 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 TOB1P50616 345 aaPredicted RBP12.3□□□□□ -0.44
PUF60-213ENST00000528999 KCNQ4P56696 695 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 ST5P78524 1137 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 FAM196AQ6ZSG2 479 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 C11orf57Q6ZUT1 292 aaPredicted RBP12.3□□□□□ -0.44
PUF60-213ENST00000528999 PTF1AQ7RTS3 328 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 CCDC186Q7Z3E2 898 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 TRIML1Q8N9V2 468 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 CTCFLQ8NI51 663 aaPredicted RBP12.3□□□□□ -0.44
PUF60-213ENST00000528999 NUP133Q8WUM0 1156 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 FERMT2Q96AC1 680 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 ZKSCAN3Q9BRR0 538 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 PHF20Q9BVI0 1012 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 PODXL2Q9NZ53 605 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 TFCP2L1Q9NZI6 479 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 ANKIB1Q9P2G1 1089 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 CLIP2Q9UDT6 1046 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 MKRN1Q9UHC7 482 aaKnown RBP12.3□□□□□ -0.44
PUF60-213ENST00000528999 CHD4Q14839 1912 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 DUOX1Q9NRD9 1551 aa12.3□□□□□ -0.44
PUF60-213ENST00000528999 KLRG2A4D1S0 409 aaPredicted RBP12.29□□□□□ -0.44
PUF60-213ENST00000528999 IL1R1P14778 569 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 CALML3P27482 149 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 MARCKSP29966 332 aaPredicted RBP12.29□□□□□ -0.44
PUF60-213ENST00000528999 GUCY1A2P33402 732 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 KRT2P35908 639 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 PKN1Q16512 942 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
PUF60-213ENST00000528999 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 KRBA2Q6ZNG9 492 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 TMTC3Q6ZXV5 915 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 TBC1D22AQ8WUA7 517 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 RPGRQ92834 1020 aaKnown RBP12.29□□□□□ -0.44
PUF60-213ENST00000528999 LZTS2Q9BRK4 669 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 KCND1Q9NSA2 647 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 DACH1Q9UI36 760 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 FBXO2Q9UK22 296 aaPredicted RBP12.29□□□□□ -0.44
PUF60-213ENST00000528999 ROBO3Q96MS0 1386 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 COL4A1P02462 1669 aa12.29□□□□□ -0.44
PUF60-213ENST00000528999 MAST2Q6P0Q8 1798 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 WTIPA6NIX2 430 aaPredicted RBP12.28□□□□□ -0.44
PUF60-213ENST00000528999 TRIM75PA6NK02 468 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 DYNC1I1O14576 645 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 CHAF1AQ13111 956 aaPredicted RBP12.28□□□□□ -0.44
PUF60-213ENST00000528999 NT5DC1Q5TFE4 455 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 OLFM4Q6UX06 510 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 SEPT12Q8IYM1 358 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 STK11IPQ8N1F8 1099 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 MLKLQ8NB16 471 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 SPC24Q8NBT2 197 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 CNNM3Q8NE01 707 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 ZNF830Q96NB3 372 aaPredicted RBP12.28□□□□□ -0.44
PUF60-213ENST00000528999 OSBPL5Q9H0X9 879 aaPredicted RBP12.28□□□□□ -0.44
PUF60-213ENST00000528999 KCNF1Q9H3M0 494 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 AATFQ9NY61 560 aaKnown RBP eCLIP12.28□□□□□ -0.44
PUF60-213ENST00000528999 SUGT1Q9Y2Z0 365 aa12.28□□□□□ -0.44
PUF60-213ENST00000528999 R3HCC1Q9Y3T6 440 aaKnown RBP12.28□□□□□ -0.44
PUF60-213ENST00000528999 V9GY48 417 aaPredicted RBP12.28□□□□□ -0.44
PUF60-213ENST00000528999 TAF1LQ8IZX4 1826 aa12.27□□□□□ -0.44
PUF60-213ENST00000528999 CBFA2T2O43439 604 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 TUBB4AP04350 444 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 PTGS1P23219 599 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 KLRK1P26718 216 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 SMARCA1P28370 1054 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 PRDX5P30044 214 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 MDM2Q00987 491 aaPredicted RBP12.27□□□□□ -0.45
PUF60-213ENST00000528999 PRR5LQ6MZQ0 368 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 GGA1Q9UJY5 639 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 KCNJ14Q9UNX9 436 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 KIAA1551Q9HCM1 1747 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 AFF2P51816 1311 aa12.27□□□□□ -0.45
PUF60-213ENST00000528999 DLEC1Q9Y238 1755 aa12.26□□□□□ -0.45
PUF60-213ENST00000528999 GPR75-ASB3A0A0A6YYF3 556 aa12.26□□□□□ -0.45
PUF60-213ENST00000528999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.26□□□□□ -0.45
PUF60-213ENST00000528999 TSPY2A6NKD2 308 aa12.26□□□□□ -0.45
PUF60-213ENST00000528999 NRDCO43847 1150 aa12.26□□□□□ -0.45
PUF60-213ENST00000528999 SERPINB2P05120 415 aa12.26□□□□□ -0.45
PUF60-213ENST00000528999 GYS1P13807 737 aa12.26□□□□□ -0.45
PUF60-213ENST00000528999 USP5P45974 858 aa12.26□□□□□ -0.45
PUF60-213ENST00000528999 KCNJ6P48051 423 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms