RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 TAOK2Q9UL54 1235 aa21.34■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 DOCK3Q8IZD9 2030 aa21.34■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 USP17L10C9JJH3 530 aa21.33■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 IDH1O75874 414 aaKnown RBP21.33■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 HMGCRP04035 888 aa21.33■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 MS4A1P11836 297 aa21.33■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 CYP7A1P22680 504 aa21.33■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 FXR1P51114 621 aaKnown RBP eCLIP21.33■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 DNAJC18Q9H819 358 aa21.33■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 PALD1Q9ULE6 856 aa21.33■■□□□ 1.01
CKLF-CMTM1-202ENST00000527845 CEP290O15078 2479 aa21.32■■□□□ 1
CKLF-CMTM1-202ENST00000527845 RLBP1P12271 317 aa21.32■■□□□ 1
CKLF-CMTM1-202ENST00000527845 MAP3K12Q12852 859 aa21.32■■□□□ 1
CKLF-CMTM1-202ENST00000527845 CEP85Q6P2H3 762 aa21.32■■□□□ 1
CKLF-CMTM1-202ENST00000527845 EAF2Q96CJ1 260 aaPredicted RBP21.32■■□□□ 1
CKLF-CMTM1-202ENST00000527845 CCDC8Q9H0W5 538 aaPredicted RBP21.32■■□□□ 1
CKLF-CMTM1-202ENST00000527845 ZBTB21Q9ULJ3 1066 aa21.32■■□□□ 1
CKLF-CMTM1-202ENST00000527845 ZBED9Q6R2W3 1325 aa21.31■■□□□ 1
CKLF-CMTM1-202ENST00000527845 TFRCP02786 760 aaKnown RBP21.31■■□□□ 1
CKLF-CMTM1-202ENST00000527845 USP5P45974 858 aa21.31■■□□□ 1
CKLF-CMTM1-202ENST00000527845 DEFB118Q96PH6 123 aa21.31■■□□□ 1
CKLF-CMTM1-202ENST00000527845 EHD4Q9H223 541 aa21.31■■□□□ 1
CKLF-CMTM1-202ENST00000527845 TLR7Q9NYK1 1049 aaKnown RBP21.31■■□□□ 1
CKLF-CMTM1-202ENST00000527845 ANKLE1Q8NAG6 615 aa21.3■■□□□ 1
CKLF-CMTM1-202ENST00000527845 SOCS4Q8WXH5 440 aa21.3■■□□□ 1
CKLF-CMTM1-202ENST00000527845 CRISPLD2Q9H0B8 497 aa21.3■■□□□ 1
CKLF-CMTM1-202ENST00000527845 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.3■■□□□ 1
CKLF-CMTM1-202ENST00000527845 SAP30BPQ9UHR5 308 aaKnown RBP21.3■■□□□ 1
CKLF-CMTM1-202ENST00000527845 GDF11O95390 407 aa21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 HERVK_113P62684 666 aa21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 DYNLL1P63167 89 aaKnown RBP21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 TTF1Q15361 905 aaPredicted RBP21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 USP17L2Q6R6M4 530 aa21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 CHRDL2Q6WN34 429 aa21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 TTC6Q86TZ1 520 aa21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 TRMT44Q8IYL2 757 aaKnown RBP21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 MAGEB6Q8N7X4 407 aa21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 GPRC5AQ8NFJ5 357 aa21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 SERPINB13Q9UIV8 391 aa21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 GJD2Q9UKL4 321 aa21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 RPTORQ8N122 1335 aa21.29■■□□□ 1
CKLF-CMTM1-202ENST00000527845 PLXNB2O15031 1838 aa21.28■■□□□ 1
CKLF-CMTM1-202ENST00000527845 MAPK4P31152 587 aa21.28■■□□□ 1
CKLF-CMTM1-202ENST00000527845 AACSQ86V21 672 aa21.28■■□□□ 1
CKLF-CMTM1-202ENST00000527845 HMX1Q9NP08 348 aaPredicted RBP21.28■■□□□ 1
CKLF-CMTM1-202ENST00000527845 DDX60LQ5H9U9 1706 aaKnown RBP21.27■■□□□ 1
CKLF-CMTM1-202ENST00000527845 NAV1Q8NEY1 1877 aa21.27■■□□□ 1
CKLF-CMTM1-202ENST00000527845 USP14P54578 494 aa21.27■■□□□ 1
CKLF-CMTM1-202ENST00000527845 PDE3AQ14432 1141 aa21.27■■□□□ 1
CKLF-CMTM1-202ENST00000527845 TATDN1Q6P1N9 297 aa21.27■■□□□ 1
CKLF-CMTM1-202ENST00000527845 MIGA1Q8NAN2 632 aa21.27■■□□□ 1
CKLF-CMTM1-202ENST00000527845 P2RX7Q99572 595 aaKnown RBP21.27■■□□□ 1
CKLF-CMTM1-202ENST00000527845 NUDT12Q9BQG2 462 aa21.27■■□□□ 1
CKLF-CMTM1-202ENST00000527845 EXOC6BQ9Y2D4 811 aa21.27■■□□□ 1
CKLF-CMTM1-202ENST00000527845 EVI5O60447 810 aa21.26■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 XRCC5P13010 732 aaKnown RBP21.26■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 JAG1P78504 1218 aa21.26■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 NECAB2Q7Z6G3 386 aa21.26■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 CCAR1Q8IX12 1150 aaKnown RBP21.26■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 C12orf42Q96LP6 360 aa21.26■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 HMMRO75330 724 aa21.25■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 GH2P01242 217 aa21.25■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 MIER1Q8N108 512 aa21.25■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.25■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 FEZ1Q99689 392 aa21.25■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 CHMP4BQ9H444 224 aaKnown RBP21.25■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 A0A1W2PPC1 479 aa21.24■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 ERVK-9P63128 1117 aa21.24■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 ERVK-24P63145 666 aa21.24■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 RPAP2Q8IXW5 612 aaPredicted RBP21.24■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 CLASRPQ8N2M8 674 aaKnown RBP21.24■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 RHPN1Q8TCX5 695 aa21.24■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 KIF1BPQ96EK5 621 aa21.24■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 CABP5Q9NP86 173 aa21.24■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 TRIOBPQ9H2D6 2365 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 USP17L15C9J2P7 530 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 USP17L13C9JLJ4 530 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 USP17L11C9JVI0 530 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 USP17L18D6R9N7 530 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 USP17L22D6RA61 530 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 USP17L17D6RBQ6 530 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 USP17L19D6RCP7 530 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 USP17L20D6RJB6 530 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 CCNA1P78396 465 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 USP17L24Q0WX57 530 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 CERKLQ49MI3 558 aaPredicted RBP21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 PANK1Q8TE04 598 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 CRNKL1Q9BZJ0 848 aaKnown RBP21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 ANTXR1Q9H6X2 564 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 TXNRD2Q9NNW7 524 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 EMILIN3Q9NT22 766 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 RBM27Q9P2N5 1060 aaKnown RBP21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 DDX19BQ9UMR2 479 aa21.23■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 MAGEB6P1A0A0J9YX57 407 aa21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 GLRX3O76003 335 aaKnown RBP21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 CYP2B6P20813 491 aa21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 RGS2P41220 211 aa21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 ABCB5Q2M3G0 1257 aa21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 SHROOM1Q2M3G4 852 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms