RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 MTFR1Q15390 333 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 CWF19L2Q2TBE0 894 aaKnown RBP10.37□□□□□ -0.75
USP48-212ENST00000527823 SUPT20HL1Q3ZLR7 823 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.37□□□□□ -0.75
USP48-212ENST00000527823 UBE2Q1Q7Z7E8 422 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 NBPF11Q86T75 865 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 EHBP1Q8NDI1 1231 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 SLC17A8Q8NDX2 589 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 PRMT6Q96LA8 375 aaPredicted RBP10.37□□□□□ -0.75
USP48-212ENST00000527823 SPTBN5Q9NRC6 3674 aaKnown RBP10.37□□□□□ -0.75
USP48-212ENST00000527823 JAG2Q9Y219 1238 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 MAP3K2Q9Y2U5 619 aa10.37□□□□□ -0.75
USP48-212ENST00000527823 EYSQ5T1H1 3165 aa10.36□□□□□ -0.75
USP48-212ENST00000527823 ZNF853P0CG23 659 aa10.36□□□□□ -0.75
USP48-212ENST00000527823 CTGFP29279 349 aa10.36□□□□□ -0.75
USP48-212ENST00000527823 IGHMBP2P38935 993 aaKnown RBP10.36□□□□□ -0.75
USP48-212ENST00000527823 LACTBP83111 547 aaPredicted RBP10.36□□□□□ -0.75
USP48-212ENST00000527823 CHRNDQ07001 517 aa10.36□□□□□ -0.75
USP48-212ENST00000527823 FOXC1Q12948 553 aa10.36□□□□□ -0.75
USP48-212ENST00000527823 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.36□□□□□ -0.75
USP48-212ENST00000527823 TEPSINQ96N21 525 aa10.36□□□□□ -0.75
USP48-212ENST00000527823 ZFYVE28Q9HCC9 887 aa10.36□□□□□ -0.75
USP48-212ENST00000527823 NEURL1BA8MQ27 555 aa10.35□□□□□ -0.75
USP48-212ENST00000527823 MYO1BO43795 1136 aa10.35□□□□□ -0.75
USP48-212ENST00000527823 ITGA6P23229 1130 aa10.35□□□□□ -0.75
USP48-212ENST00000527823 UBE3BQ7Z3V4 1068 aa10.35□□□□□ -0.75
USP48-212ENST00000527823 ANKRD2Q9GZV1 360 aa10.35□□□□□ -0.75
USP48-212ENST00000527823 CACNA1FO60840 1977 aa10.35□□□□□ -0.75
USP48-212ENST00000527823 DOCK2Q92608 1830 aa10.35□□□□□ -0.75
USP48-212ENST00000527823 ADGRA2Q96PE1 1338 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 PI4KAP2A4QPH2 592 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 ELL2O00472 640 aaPredicted RBP10.34□□□□□ -0.75
USP48-212ENST00000527823 TLR2O60603 784 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 DDX58O95786 925 aaKnown RBP10.34□□□□□ -0.75
USP48-212ENST00000527823 IL1R1P14778 569 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 KCNJ4P48050 445 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 GTF2A2P52657 109 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 CASP7P55210 303 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 FKBP1AP62942 108 aaKnown RBP10.34□□□□□ -0.75
USP48-212ENST00000527823 ARHGEF6Q15052 776 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 C15orf52Q6ZUT6 534 aaKnown RBP10.34□□□□□ -0.75
USP48-212ENST00000527823 PI4KAP1Q8N8J0 262 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 C8orf58Q8NAV2 365 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 RUNDC1Q96C34 613 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 MRGPRX2Q96LB1 330 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 PLA2G12BQ9BX93 195 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 TMEM39BQ9GZU3 492 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 PCDHB9Q9Y5E1 797 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 SNCAIPQ9Y6H5 919 aa10.34□□□□□ -0.75
USP48-212ENST00000527823 LAMA2P24043 3122 aaKnown RBP10.33□□□□□ -0.76
USP48-212ENST00000527823 DDX60LQ5H9U9 1706 aaKnown RBP10.33□□□□□ -0.76
USP48-212ENST00000527823 WNT7AO00755 349 aa10.33□□□□□ -0.76
USP48-212ENST00000527823 TAF5LO75529 589 aa10.33□□□□□ -0.76
USP48-212ENST00000527823 VARSP26640 1264 aaKnown RBP10.33□□□□□ -0.76
USP48-212ENST00000527823 TNFAIP1Q13829 316 aa10.33□□□□□ -0.76
USP48-212ENST00000527823 KSR2Q6VAB6 950 aa10.33□□□□□ -0.76
USP48-212ENST00000527823 DPF3Q92784 378 aa10.33□□□□□ -0.76
USP48-212ENST00000527823 MPHOSPH8Q99549 860 aa10.33□□□□□ -0.76
USP48-212ENST00000527823 IFT57Q9NWB7 429 aa10.33□□□□□ -0.76
USP48-212ENST00000527823 PKD2L1Q9P0L9 805 aa10.33□□□□□ -0.76
USP48-212ENST00000527823 ZNF70Q9UC06 446 aaPredicted RBP10.33□□□□□ -0.76
USP48-212ENST00000527823 BTBD19C9JJ37 291 aa10.32□□□□□ -0.76
USP48-212ENST00000527823 H7C1W4 665 aa10.32□□□□□ -0.76
USP48-212ENST00000527823 ZBTB7BO15156 539 aaPredicted RBP10.32□□□□□ -0.76
USP48-212ENST00000527823 GJA8P48165 433 aa10.32□□□□□ -0.76
USP48-212ENST00000527823 RBM5P52756 815 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP48-212ENST00000527823 ZNF804AQ7Z570 1209 aa10.32□□□□□ -0.76
USP48-212ENST00000527823 FAM174AQ8TBP5 190 aa10.32□□□□□ -0.76
USP48-212ENST00000527823 TRIM47Q96LD4 638 aa10.32□□□□□ -0.76
USP48-212ENST00000527823 C1QTNF2Q9BXJ5 285 aa10.32□□□□□ -0.76
USP48-212ENST00000527823 TDRD3Q9H7E2 651 aaKnown RBP10.32□□□□□ -0.76
USP48-212ENST00000527823 ZCCHC17Q9NP64 241 aaKnown RBP10.32□□□□□ -0.76
USP48-212ENST00000527823 PHIPQ8WWQ0 1821 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 RPAP1Q9BWH6 1393 aaPredicted RBP10.31□□□□□ -0.76
USP48-212ENST00000527823 A0A1W2PPC1 479 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 FARP2O94887 1054 aaPredicted RBP10.31□□□□□ -0.76
USP48-212ENST00000527823 GNRH1P01148 92 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 CSF1RP07333 972 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 CCL5P13501 91 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 PRMT2P55345 433 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 KIF22Q14807 665 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 TSPYL6Q8N831 410 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 HTATIP2Q9BUP3 242 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 SRRDQ9UH36 339 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 CSADQ9Y600 493 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 DOCK3Q8IZD9 2030 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 FAM205AQ6ZU69 1335 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 MYPNQ86TC9 1320 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 MYBBP1AQ9BQG0 1328 aaKnown RBP10.31□□□□□ -0.76
USP48-212ENST00000527823 CDH23Q9H251 3354 aa10.31□□□□□ -0.76
USP48-212ENST00000527823 DOCK1Q14185 1865 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 TCP10L2B9ZVM9 353 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 TNFRSF10AO00220 468 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 GJB1P08034 283 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 GRK4P32298 578 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 NEXNQ0ZGT2 675 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 SEMA3FQ13275 785 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 GCKRQ14397 625 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 ARID5BQ14865 1188 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 MFSD14BQ5SR56 506 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms