RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 ELNP15502 786 aa14.31□□□□□ -0.12
CTNNA1-237ENST00000523275 USP5P45974 858 aa14.31□□□□□ -0.12
CTNNA1-237ENST00000523275 GJA8P48165 433 aa14.31□□□□□ -0.12
CTNNA1-237ENST00000523275 MTMR2Q13614 643 aa14.31□□□□□ -0.12
CTNNA1-237ENST00000523275 CLASRPQ8N2M8 674 aaKnown RBP14.31□□□□□ -0.12
CTNNA1-237ENST00000523275 SHISA4Q96DD7 197 aa14.31□□□□□ -0.12
CTNNA1-237ENST00000523275 ZBTB40Q9NUA8 1239 aa14.31□□□□□ -0.12
CTNNA1-237ENST00000523275 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
CTNNA1-237ENST00000523275 COG6Q9Y2V7 657 aa14.31□□□□□ -0.12
CTNNA1-237ENST00000523275 MAST2Q6P0Q8 1798 aa14.3□□□□□ -0.12
CTNNA1-237ENST00000523275 USP17L10C9JJH3 530 aa14.3□□□□□ -0.12
CTNNA1-237ENST00000523275 APBB1O00213 710 aa14.3□□□□□ -0.12
CTNNA1-237ENST00000523275 GDF11O95390 407 aa14.3□□□□□ -0.12
CTNNA1-237ENST00000523275 HOXA7P31268 230 aaPredicted RBP14.3□□□□□ -0.12
CTNNA1-237ENST00000523275 IRX3P78415 501 aaPredicted RBP14.3□□□□□ -0.12
CTNNA1-237ENST00000523275 TTF1Q15361 905 aaPredicted RBP14.3□□□□□ -0.12
CTNNA1-237ENST00000523275 KIF1BPQ96EK5 621 aa14.3□□□□□ -0.12
CTNNA1-237ENST00000523275 UNC93B1Q9H1C4 597 aa14.3□□□□□ -0.12
CTNNA1-237ENST00000523275 CHMP4BQ9H444 224 aaKnown RBP14.3□□□□□ -0.12
CTNNA1-237ENST00000523275 IFIT2P09913 472 aaKnown RBP14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 SHROOM1Q2M3G4 852 aaPredicted RBP14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 HABP4Q5JVS0 413 aaKnown RBP14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 TATDN1Q6P1N9 297 aa14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 TTC6Q86TZ1 520 aa14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 SIRT2Q8IXJ6 389 aa14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 U2AF1L4Q8WU68 220 aaKnown RBP14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 P2RX7Q99572 595 aaKnown RBP14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 EHD4Q9H223 541 aa14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 MORF4L1Q9UBU8 362 aa14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 SERPINB13Q9UIV8 391 aa14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 RCAN3Q9UKA8 241 aa14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
CTNNA1-237ENST00000523275 MAGEB6P1A0A0J9YX57 407 aa14.28□□□□□ -0.12
CTNNA1-237ENST00000523275 RAB11FIP3O75154 756 aa14.28□□□□□ -0.12
CTNNA1-237ENST00000523275 SGPL1O95470 568 aa14.28□□□□□ -0.12
CTNNA1-237ENST00000523275 GH2P01242 217 aa14.28□□□□□ -0.12
CTNNA1-237ENST00000523275 INHAP05111 366 aa14.28□□□□□ -0.12
CTNNA1-237ENST00000523275 SLC9C2Q5TAH2 1124 aa14.28□□□□□ -0.12
CTNNA1-237ENST00000523275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTNNA1-237ENST00000523275 RIOK1Q9BRS2 568 aaKnown RBP14.28□□□□□ -0.12
CTNNA1-237ENST00000523275 BCL11AQ9H165 835 aa14.28□□□□□ -0.12
CTNNA1-237ENST00000523275 MGAMO43451 1857 aa14.27□□□□□ -0.12
CTNNA1-237ENST00000523275 MYO5AQ9Y4I1 1855 aaKnown RBP14.27□□□□□ -0.12
CTNNA1-237ENST00000523275 SIPA1L1O43166 1804 aa14.27□□□□□ -0.12
CTNNA1-237ENST00000523275 H0YGN5 161 aa14.27□□□□□ -0.13
CTNNA1-237ENST00000523275 PDE6AP16499 860 aa14.27□□□□□ -0.13
CTNNA1-237ENST00000523275 CAPN2P17655 700 aa14.27□□□□□ -0.13
CTNNA1-237ENST00000523275 USP17L2Q6R6M4 530 aa14.27□□□□□ -0.13
CTNNA1-237ENST00000523275 UBE2Q1Q7Z7E8 422 aa14.27□□□□□ -0.13
CTNNA1-237ENST00000523275 GPRC5AQ8NFJ5 357 aa14.27□□□□□ -0.13
CTNNA1-237ENST00000523275 DPF3Q92784 378 aa14.27□□□□□ -0.13
CTNNA1-237ENST00000523275 EMILIN3Q9NT22 766 aa14.27□□□□□ -0.13
CTNNA1-237ENST00000523275 GJD2Q9UKL4 321 aa14.27□□□□□ -0.13
CTNNA1-237ENST00000523275 LOC285556D6RIA3 1793 aa14.27□□□□□ -0.13
CTNNA1-237ENST00000523275 GOLIM4O00461 696 aa14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 TFRCP02786 760 aaKnown RBP14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 POLR3DP05423 398 aaPredicted RBP14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 PLCD1P51178 756 aa14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 HERVK_113P62684 666 aa14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 CERKLQ49MI3 558 aaPredicted RBP14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 DEFB118Q96PH6 123 aa14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 DNAJC2Q99543 621 aaKnown RBP14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 HTATIP2Q9BUP3 242 aa14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 CRNKL1Q9BZJ0 848 aaKnown RBP14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 PCDH10Q9P2E7 1040 aa14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 RBPJLQ9UBG7 517 aa14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 CEP290O15078 2479 aa14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 ATAD5Q96QE3 1844 aa14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 MKI67P46013 3256 aaKnown RBP14.26□□□□□ -0.13
CTNNA1-237ENST00000523275 CDK5RAP2Q96SN8 1893 aa14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 ZNF532Q9HCE3 1301 aa14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 BRCA2P51587 3418 aa14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 FARP2O94887 1054 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 RAB3GAP1Q15042 981 aa14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 ABCB5Q2M3G0 1257 aa14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 FEZ1Q99689 392 aa14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 TXNRD2Q9NNW7 524 aa14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 CABP5Q9NP86 173 aa14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 PAK6Q9NQU5 681 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 FOCADQ5VW36 1801 aa14.25□□□□□ -0.13
CTNNA1-237ENST00000523275 TCRBV5S4A2TA0A5A2 114 aa14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 PEX10O60683 326 aa14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 HMGCRP04035 888 aa14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 ATP5JP18859 108 aa14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 HOXD11P31277 338 aaPredicted RBP14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 SHMT1P34896 483 aa14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 USP14P54578 494 aa14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 PDE3AQ14432 1141 aa14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 GTF3C2Q8WUA4 911 aaPredicted RBP14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 C12orf42Q96LP6 360 aa14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 KIAA1683Q9H0B3 1180 aa14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 RNF216Q9NWF9 866 aaPredicted RBP14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 MCM9Q9NXL9 1143 aa14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 COLQQ9Y215 455 aaPredicted RBP14.24□□□□□ -0.13
CTNNA1-237ENST00000523275 USP17L15C9J2P7 530 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 USP17L13C9JLJ4 530 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 USP17L11C9JVI0 530 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 USP17L18D6R9N7 530 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 USP17L22D6RA61 530 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 USP17L17D6RBQ6 530 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms