RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 HRASLS5Q96KN8 279 aa8.38□□□□□ -1.07
LINC00535-204ENST00000520513 PRDM7Q9NQW5 492 aa8.38□□□□□ -1.07
LINC00535-204ENST00000520513 TLR6Q9Y2C9 796 aa8.38□□□□□ -1.07
LINC00535-204ENST00000520513 TMEM265A0A087WTH1 108 aa8.37□□□□□ -1.07
LINC00535-204ENST00000520513 LRIG2O94898 1065 aa8.37□□□□□ -1.07
LINC00535-204ENST00000520513 RECKO95980 971 aa8.37□□□□□ -1.07
LINC00535-204ENST00000520513 TCF3P15923 654 aa8.37□□□□□ -1.07
LINC00535-204ENST00000520513 KCT2Q8NC54 265 aa8.37□□□□□ -1.07
LINC00535-204ENST00000520513 GTF2IRD1Q9UHL9 959 aa8.37□□□□□ -1.07
LINC00535-204ENST00000520513 SNCAIPQ9Y6H5 919 aa8.37□□□□□ -1.07
LINC00535-204ENST00000520513 CARMIL2Q6F5E8 1435 aa8.37□□□□□ -1.07
LINC00535-204ENST00000520513 BTBD11A6QL63 1104 aa8.36□□□□□ -1.07
LINC00535-204ENST00000520513 F6X3S4 739 aa8.36□□□□□ -1.07
LINC00535-204ENST00000520513 GRK4P32298 578 aa8.36□□□□□ -1.07
LINC00535-204ENST00000520513 FOXQ1Q9C009 403 aa8.36□□□□□ -1.07
LINC00535-204ENST00000520513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
LINC00535-204ENST00000520513 BIN1O00499 593 aa8.35□□□□□ -1.07
LINC00535-204ENST00000520513 CAP2P40123 477 aa8.35□□□□□ -1.07
LINC00535-204ENST00000520513 LRRN4CLQ8ND94 238 aa8.35□□□□□ -1.07
LINC00535-204ENST00000520513 MIPEPQ99797 713 aa8.35□□□□□ -1.07
LINC00535-204ENST00000520513 KRTAP9-9Q9BYP9 154 aa8.35□□□□□ -1.07
LINC00535-204ENST00000520513 KRTAP9-4Q9BYQ2 154 aa8.35□□□□□ -1.07
LINC00535-204ENST00000520513 SNX11Q9Y5W9 270 aa8.35□□□□□ -1.07
LINC00535-204ENST00000520513 ETF1P62495 437 aaKnown RBP8.34□□□□□ -1.07
LINC00535-204ENST00000520513 TSNAXIP1Q2TAA8 658 aa8.34□□□□□ -1.07
LINC00535-204ENST00000520513 PRAMEF13Q5VWM6 474 aa8.34□□□□□ -1.07
LINC00535-204ENST00000520513 OGFOD2Q6N063 350 aa8.34□□□□□ -1.07
LINC00535-204ENST00000520513 PHC3Q8NDX5 983 aa8.34□□□□□ -1.07
LINC00535-204ENST00000520513 RC3H2Q9HBD1 1191 aaKnown RBP8.34□□□□□ -1.07
LINC00535-204ENST00000520513 TJP2Q9UDY2 1190 aa8.34□□□□□ -1.07
LINC00535-204ENST00000520513 VTI1BQ9UEU0 232 aa8.34□□□□□ -1.07
LINC00535-204ENST00000520513 PITPNM2Q9BZ72 1349 aa8.33□□□□□ -1.08
LINC00535-204ENST00000520513 SCAMP3O14828 347 aaKnown RBP8.33□□□□□ -1.08
LINC00535-204ENST00000520513 ANGEL2Q5VTE6 544 aaKnown RBP8.33□□□□□ -1.08
LINC00535-204ENST00000520513 HID1Q8IV36 788 aa8.33□□□□□ -1.08
LINC00535-204ENST00000520513 XAGE3Q8WTP9 111 aa8.33□□□□□ -1.08
LINC00535-204ENST00000520513 DPH2Q9BQC3 489 aaPredicted RBP8.33□□□□□ -1.08
LINC00535-204ENST00000520513 BACH2Q9BYV9 841 aa8.33□□□□□ -1.08
LINC00535-204ENST00000520513 PRDM5Q9NQX1 630 aaPredicted RBP8.33□□□□□ -1.08
LINC00535-204ENST00000520513 USP31Q70CQ4 1352 aa8.33□□□□□ -1.08
LINC00535-204ENST00000520513 CST3P01034 146 aaPredicted RBP8.32□□□□□ -1.08
LINC00535-204ENST00000520513 TAF1CQ15572 869 aaPredicted RBP8.32□□□□□ -1.08
LINC00535-204ENST00000520513 ATG4DQ86TL0 474 aaPredicted RBP8.32□□□□□ -1.08
LINC00535-204ENST00000520513 POU5F2Q8N7G0 328 aa8.32□□□□□ -1.08
LINC00535-204ENST00000520513 CRELD1Q96HD1 420 aa8.32□□□□□ -1.08
LINC00535-204ENST00000520513 METTL5Q9NRN9 209 aaKnown RBP8.32□□□□□ -1.08
LINC00535-204ENST00000520513 SEMA3GQ9NS98 782 aa8.32□□□□□ -1.08
LINC00535-204ENST00000520513 MAPK8IP1Q9UQF2 711 aa8.32□□□□□ -1.08
LINC00535-204ENST00000520513 LETMD1Q6P1Q0 360 aa8.31□□□□□ -1.08
LINC00535-204ENST00000520513 BNC2Q6ZN30 1099 aaPredicted RBP8.31□□□□□ -1.08
LINC00535-204ENST00000520513 PI4K2BQ8TCG2 481 aa8.31□□□□□ -1.08
LINC00535-204ENST00000520513 ASB11Q8WXH4 323 aa8.31□□□□□ -1.08
LINC00535-204ENST00000520513 JARID2Q92833 1246 aaPredicted RBP8.31□□□□□ -1.08
LINC00535-204ENST00000520513 MIR1-1HGQ9H1L0 117 aa8.31□□□□□ -1.08
LINC00535-204ENST00000520513 CORINQ9Y5Q5 1042 aa8.31□□□□□ -1.08
LINC00535-204ENST00000520513 ZNF865P0CJ78 1059 aaPredicted RBP8.3□□□□□ -1.08
LINC00535-204ENST00000520513 ST13P50502 369 aaKnown RBP8.3□□□□□ -1.08
LINC00535-204ENST00000520513 HSPA12BQ96MM6 686 aa8.3□□□□□ -1.08
LINC00535-204ENST00000520513 NOC4LQ9BVI4 516 aaKnown RBP8.3□□□□□ -1.08
LINC00535-204ENST00000520513 ST14Q9Y5Y6 855 aa8.3□□□□□ -1.08
LINC00535-204ENST00000520513 CAPN6Q9Y6Q1 641 aa8.3□□□□□ -1.08
LINC00535-204ENST00000520513 GNAT3A8MTJ3 354 aa8.29□□□□□ -1.08
LINC00535-204ENST00000520513 CLCN7P51798 805 aa8.29□□□□□ -1.08
LINC00535-204ENST00000520513 IKZF1Q13422 519 aa8.29□□□□□ -1.08
LINC00535-204ENST00000520513 C22orf34Q6ZV56 151 aa8.29□□□□□ -1.08
LINC00535-204ENST00000520513 CDH24Q86UP0 819 aa8.29□□□□□ -1.08
LINC00535-204ENST00000520513 MRPL41Q8IXM3 137 aaKnown RBP8.29□□□□□ -1.08
LINC00535-204ENST00000520513 MFSD2AQ8NA29 543 aa8.29□□□□□ -1.08
LINC00535-204ENST00000520513 TMEM87AQ8NBN3 555 aa8.29□□□□□ -1.08
LINC00535-204ENST00000520513 ACSF2Q96CM8 615 aaPredicted RBP8.29□□□□□ -1.08
LINC00535-204ENST00000520513 ATP13A1Q9HD20 1204 aa8.29□□□□□ -1.08
LINC00535-204ENST00000520513 TPX2Q9ULW0 747 aaKnown RBP8.29□□□□□ -1.08
LINC00535-204ENST00000520513 FAM221AA4D161 298 aa8.28□□□□□ -1.08
LINC00535-204ENST00000520513 PGRP06401 933 aa8.28□□□□□ -1.08
LINC00535-204ENST00000520513 RPL6Q02878 288 aaKnown RBP8.28□□□□□ -1.08
LINC00535-204ENST00000520513 ZP2Q05996 745 aa8.28□□□□□ -1.08
LINC00535-204ENST00000520513 SFRP5Q5T4F7 317 aa8.28□□□□□ -1.08
LINC00535-204ENST00000520513 CDKAL1Q5VV42 579 aa8.28□□□□□ -1.08
LINC00535-204ENST00000520513 SLC23A3Q6PIS1 610 aa8.28□□□□□ -1.08
LINC00535-204ENST00000520513 TMEM87BQ96K49 555 aa8.28□□□□□ -1.08
LINC00535-204ENST00000520513 PF4P02776 101 aa8.27□□□□□ -1.09
LINC00535-204ENST00000520513 LDLRAD1Q5T700 205 aa8.27□□□□□ -1.09
LINC00535-204ENST00000520513 MFSD4AQ8N468 514 aa8.27□□□□□ -1.09
LINC00535-204ENST00000520513 DNAJB8Q8NHS0 232 aa8.27□□□□□ -1.09
LINC00535-204ENST00000520513 RHOVQ96L33 236 aa8.27□□□□□ -1.09
LINC00535-204ENST00000520513 TACC3Q9Y6A5 838 aa8.27□□□□□ -1.09
LINC00535-204ENST00000520513 WASH4PA8MWX3 477 aa8.26□□□□□ -1.09
LINC00535-204ENST00000520513 UPK3BL1B0FP48 263 aa8.26□□□□□ -1.09
LINC00535-204ENST00000520513 UPK3BL2E5RIL1 263 aa8.26□□□□□ -1.09
LINC00535-204ENST00000520513 H3BS24 57 aa8.26□□□□□ -1.09
LINC00535-204ENST00000520513 CILPO75339 1184 aa8.26□□□□□ -1.09
LINC00535-204ENST00000520513 CBX7O95931 251 aa8.26□□□□□ -1.09
LINC00535-204ENST00000520513 F13A1P00488 732 aa8.26□□□□□ -1.09
LINC00535-204ENST00000520513 LMNB1P20700 586 aa8.26□□□□□ -1.09
LINC00535-204ENST00000520513 CAMK2GQ13555 558 aaPredicted RBP8.26□□□□□ -1.09
LINC00535-204ENST00000520513 PPP1R13LQ8WUF5 828 aa8.26□□□□□ -1.09
LINC00535-204ENST00000520513 C19orf73Q9NVV2 129 aa8.26□□□□□ -1.09
LINC00535-204ENST00000520513 TNK2Q07912 1038 aa8.25□□□□□ -1.09
LINC00535-204ENST00000520513 FYB2Q5VWT5 728 aa8.25□□□□□ -1.09
LINC00535-204ENST00000520513 MCATQ8IVS2 390 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms