RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CDK5RAP2Q96SN8 1893 aa18.5■□□□□ 0.55
CSMD1-207ENST00000520451 FOCADQ5VW36 1801 aa18.49■□□□□ 0.55
CSMD1-207ENST00000520451 USP5P45974 858 aa18.49■□□□□ 0.55
CSMD1-207ENST00000520451 CERS3Q8IU89 383 aa18.49■□□□□ 0.55
CSMD1-207ENST00000520451 U2AF1L4Q8WU68 220 aaKnown RBP18.49■□□□□ 0.55
CSMD1-207ENST00000520451 ANTXR1Q9H6X2 564 aa18.49■□□□□ 0.55
CSMD1-207ENST00000520451 IL1RAPL2Q9NP60 686 aa18.49■□□□□ 0.55
CSMD1-207ENST00000520451 PCDH10Q9P2E7 1040 aa18.49■□□□□ 0.55
CSMD1-207ENST00000520451 ZBTB21Q9ULJ3 1066 aa18.49■□□□□ 0.55
CSMD1-207ENST00000520451 MS4A1P11836 297 aa18.48■□□□□ 0.55
CSMD1-207ENST00000520451 IRX3P78415 501 aaPredicted RBP18.48■□□□□ 0.55
CSMD1-207ENST00000520451 MAP3K12Q12852 859 aa18.48■□□□□ 0.55
CSMD1-207ENST00000520451 HSP90AB4PQ58FF6 505 aa18.48■□□□□ 0.55
CSMD1-207ENST00000520451 GINM1Q9NU53 330 aa18.48■□□□□ 0.55
CSMD1-207ENST00000520451 USP17L10C9JJH3 530 aa18.47■□□□□ 0.55
CSMD1-207ENST00000520451 H0YGN5 161 aa18.47■□□□□ 0.55
CSMD1-207ENST00000520451 RHPN1Q8TCX5 695 aa18.47■□□□□ 0.55
CSMD1-207ENST00000520451 DPF3Q92784 378 aa18.47■□□□□ 0.55
CSMD1-207ENST00000520451 CEP290O15078 2479 aa18.47■□□□□ 0.55
CSMD1-207ENST00000520451 C19orf81C9J6K1 198 aa18.46■□□□□ 0.55
CSMD1-207ENST00000520451 APBB1O00213 710 aa18.46■□□□□ 0.55
CSMD1-207ENST00000520451 UBE2Q1Q7Z7E8 422 aa18.46■□□□□ 0.55
CSMD1-207ENST00000520451 FARP2O94887 1054 aaPredicted RBP18.45■□□□□ 0.54
CSMD1-207ENST00000520451 SGPL1O95470 568 aa18.45■□□□□ 0.54
CSMD1-207ENST00000520451 GH2P01242 217 aa18.45■□□□□ 0.54
CSMD1-207ENST00000520451 HOXA7P31268 230 aaPredicted RBP18.45■□□□□ 0.54
CSMD1-207ENST00000520451 TMED8Q6PL24 325 aaPredicted RBP18.45■□□□□ 0.54
CSMD1-207ENST00000520451 DEFB118Q96PH6 123 aa18.45■□□□□ 0.54
CSMD1-207ENST00000520451 P2RX7Q99572 595 aaKnown RBP18.45■□□□□ 0.54
CSMD1-207ENST00000520451 HTATIP2Q9BUP3 242 aa18.45■□□□□ 0.54
CSMD1-207ENST00000520451 MORF4L1Q9UBU8 362 aa18.45■□□□□ 0.54
CSMD1-207ENST00000520451 COLQQ9Y215 455 aaPredicted RBP18.45■□□□□ 0.54
CSMD1-207ENST00000520451 HMMRO75330 724 aa18.44■□□□□ 0.54
CSMD1-207ENST00000520451 HERVK_113P62684 666 aa18.44■□□□□ 0.54
CSMD1-207ENST00000520451 TTF1Q15361 905 aaPredicted RBP18.44■□□□□ 0.54
CSMD1-207ENST00000520451 CLASRPQ8N2M8 674 aaKnown RBP18.44■□□□□ 0.54
CSMD1-207ENST00000520451 KIF1BPQ96EK5 621 aa18.44■□□□□ 0.54
CSMD1-207ENST00000520451 EHD4Q9H223 541 aa18.44■□□□□ 0.54
CSMD1-207ENST00000520451 SERPINB13Q9UIV8 391 aa18.44■□□□□ 0.54
CSMD1-207ENST00000520451 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
CSMD1-207ENST00000520451 PEX10O60683 326 aa18.43■□□□□ 0.54
CSMD1-207ENST00000520451 TFRCP02786 760 aaKnown RBP18.43■□□□□ 0.54
CSMD1-207ENST00000520451 TATDN1Q6P1N9 297 aa18.43■□□□□ 0.54
CSMD1-207ENST00000520451 USP17L2Q6R6M4 530 aa18.43■□□□□ 0.54
CSMD1-207ENST00000520451 TTC6Q86TZ1 520 aa18.43■□□□□ 0.54
CSMD1-207ENST00000520451 RPAP2Q8IXW5 612 aaPredicted RBP18.43■□□□□ 0.54
CSMD1-207ENST00000520451 RIOK1Q9BRS2 568 aaKnown RBP18.43■□□□□ 0.54
CSMD1-207ENST00000520451 BCL11AQ9H165 835 aa18.43■□□□□ 0.54
CSMD1-207ENST00000520451 PAK6Q9NQU5 681 aaPredicted RBP18.43■□□□□ 0.54
CSMD1-207ENST00000520451 GJD2Q9UKL4 321 aa18.43■□□□□ 0.54
CSMD1-207ENST00000520451 DDX19BQ9UMR2 479 aa18.43■□□□□ 0.54
CSMD1-207ENST00000520451 DOCK3Q8IZD9 2030 aa18.43■□□□□ 0.54
CSMD1-207ENST00000520451 MYH1P12882 1939 aa18.43■□□□□ 0.54
CSMD1-207ENST00000520451 MAGEB6P1A0A0J9YX57 407 aa18.42■□□□□ 0.54
CSMD1-207ENST00000520451 HMGCRP04035 888 aa18.42■□□□□ 0.54
CSMD1-207ENST00000520451 IFIT2P09913 472 aaKnown RBP18.42■□□□□ 0.54
CSMD1-207ENST00000520451 PDE6AP16499 860 aa18.42■□□□□ 0.54
CSMD1-207ENST00000520451 GPRC5AQ8NFJ5 357 aa18.42■□□□□ 0.54
CSMD1-207ENST00000520451 DNAJC2Q99543 621 aaKnown RBP18.42■□□□□ 0.54
CSMD1-207ENST00000520451 FEZ1Q99689 392 aa18.42■□□□□ 0.54
CSMD1-207ENST00000520451 TXNRD2Q9NNW7 524 aa18.42■□□□□ 0.54
CSMD1-207ENST00000520451 EMILIN3Q9NT22 766 aa18.42■□□□□ 0.54
CSMD1-207ENST00000520451 ZBTB40Q9NUA8 1239 aa18.42■□□□□ 0.54
CSMD1-207ENST00000520451 GOLIM4O00461 696 aa18.41■□□□□ 0.54
CSMD1-207ENST00000520451 RAB3GAP1Q15042 981 aa18.41■□□□□ 0.54
CSMD1-207ENST00000520451 ZYXQ15942 572 aaKnown RBP18.41■□□□□ 0.54
CSMD1-207ENST00000520451 CERKLQ49MI3 558 aaPredicted RBP18.41■□□□□ 0.54
CSMD1-207ENST00000520451 SLC9C2Q5TAH2 1124 aa18.41■□□□□ 0.54
CSMD1-207ENST00000520451 SIRT2Q8IXJ6 389 aa18.41■□□□□ 0.54
CSMD1-207ENST00000520451 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.41■□□□□ 0.54
CSMD1-207ENST00000520451 POLR3DP05423 398 aaPredicted RBP18.4■□□□□ 0.54
CSMD1-207ENST00000520451 CAPN2P17655 700 aa18.4■□□□□ 0.54
CSMD1-207ENST00000520451 FXR1P51114 621 aaKnown RBP eCLIP18.4■□□□□ 0.54
CSMD1-207ENST00000520451 ABCB5Q2M3G0 1257 aa18.4■□□□□ 0.54
CSMD1-207ENST00000520451 CHRDL2Q6WN34 429 aa18.4■□□□□ 0.54
CSMD1-207ENST00000520451 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.4■□□□□ 0.54
CSMD1-207ENST00000520451 GTF3C2Q8WUA4 911 aaPredicted RBP18.4■□□□□ 0.54
CSMD1-207ENST00000520451 PAGR1Q9BTK6 254 aa18.4■□□□□ 0.54
CSMD1-207ENST00000520451 CRNKL1Q9BZJ0 848 aaKnown RBP18.4■□□□□ 0.54
CSMD1-207ENST00000520451 RBPJLQ9UBG7 517 aa18.4■□□□□ 0.54
CSMD1-207ENST00000520451 RAB11FIP3O75154 756 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 CYP2B6P20813 491 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 MAPK4P31152 587 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 PLCD1P51178 756 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 ERVK-9P63128 1117 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 ERVK-24P63145 666 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 TRIM32Q13049 653 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 CCAR1Q8IX12 1150 aaKnown RBP18.39■□□□□ 0.53
CSMD1-207ENST00000520451 C12orf42Q96LP6 360 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 NUDT12Q9BQG2 462 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 CRISPLD2Q9H0B8 497 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 CABP5Q9NP86 173 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 NR2E3Q9Y5X4 410 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 ZNF532Q9HCE3 1301 aa18.39■□□□□ 0.53
CSMD1-207ENST00000520451 SHMT1P34896 483 aa18.38■□□□□ 0.53
CSMD1-207ENST00000520451 USP14P54578 494 aa18.38■□□□□ 0.53
CSMD1-207ENST00000520451 PDE3AQ14432 1141 aa18.38■□□□□ 0.53
CSMD1-207ENST00000520451 SOCS4Q8WXH5 440 aa18.38■□□□□ 0.53
CSMD1-207ENST00000520451 TRIB2Q92519 343 aa18.38■□□□□ 0.53
CSMD1-207ENST00000520451 EDC3Q96F86 508 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms