RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	PICK1	Q9NRD5	415 aa		7.17	□□□□□ -1.26
CTNNA1-222	ENST00000520400	C1GALT1	Q9NS00	363 aa		7.17	□□□□□ -1.26
CTNNA1-222	ENST00000520400	GMIP	Q9P107	970 aa		7.17	□□□□□ -1.26
CTNNA1-222	ENST00000520400	STRIP2	Q9ULQ0	834 aa		7.17	□□□□□ -1.26
CTNNA1-222	ENST00000520400	DAGLA	Q9Y4D2	1042 aa		7.17	□□□□□ -1.26
CTNNA1-222	ENST00000520400	CNTNAP4	Q9C0A0	1308 aa		7.17	□□□□□ -1.26
CTNNA1-222	ENST00000520400	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.17	□□□□□ -1.26
CTNNA1-222	ENST00000520400	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	FAM86C2P	A6NEL3	165 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	NME1	P15531	152 aa	Known RBP	7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	ANKS3	Q6ZW76	656 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	HID1	Q8IV36	788 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	RIN3	Q8TB24	985 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	ZNF507	Q8TCN5	953 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	XAGE3	Q8WTP9	111 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	PPP1R13L	Q8WUF5	828 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	CPLX3	Q8WVH0	158 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	GATA6	Q92908	595 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	UTP4	Q969X6	686 aa	Known RBP	7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	LNPK	Q9C0E8	428 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	CNNM2	Q9H8M5	875 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	PIDD1	Q9HB75	910 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400	LTBP3	Q9NS15	1303 aa		7.16	□□□□□ -1.26
CTNNA1-222	ENST00000520400		A0A1W2PQH9	124 aa		7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	SART1	O43290	800 aa	Known RBP	7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	GAS2	O43903	313 aa	Known RBP	7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	UBOX5	O94941	541 aa		7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	MAP4	P27816	1152 aa	Known RBP	7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	PDE4B	Q07343	736 aa		7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	CDK5R2	Q13319	367 aa		7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	CDCP2	Q5VXM1	449 aa		7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	ARMCX6	Q7L4S7	300 aa		7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	NLRC3	Q7RTR2	1065 aa		7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	FAM13C	Q8NE31	585 aa		7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	TPSG1	Q9NRR2	321 aa		7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	PRKAG3	Q9UGI9	489 aa		7.15	□□□□□ -1.26
CTNNA1-222	ENST00000520400	RNF225	M0QZC1	329 aa	Predicted RBP	7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	LEFTY1	O75610	366 aa		7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	STK10	O94804	968 aa	Known RBP	7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	CST3	P01034	146 aa	Predicted RBP	7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	ADM	P35318	185 aa		7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	CAP2	P40123	477 aa		7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	USP11	P51784	963 aa		7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	SERINC3	Q13530	473 aa		7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	SLFN12	Q8IYM2	578 aa		7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	PMFBP1	Q8TBY8	1022 aa		7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	ARMC5	Q96C12	935 aa		7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	KIF2C	Q99661	725 aa		7.14	□□□□□ -1.27
CTNNA1-222	ENST00000520400	HMX2	A2RU54	273 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400		B2RBV5	119 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	TNFRSF10C	O14798	259 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	SLITRK5	O94991	958 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	GDF11	O95390	407 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	GATA4	P43694	442 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	UVSSA	Q2YD98	709 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	SLC6A19	Q695T7	634 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	UNC5A	Q6ZN44	842 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	BEND4	Q6ZU67	534 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	DPH6	Q7L8W6	267 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	TTC6	Q86TZ1	520 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	TMEM192	Q8IY95	271 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	PIF1	Q9H611	641 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	PCOLCE2	Q9UKZ9	415 aa		7.13	□□□□□ -1.27
CTNNA1-222	ENST00000520400	PROC	P04070	461 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	IMPDH2	P12268	514 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	GUCY2C	P25092	1073 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	RXRB	P28702	533 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	CASP7	P55210	303 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	DNAJB8	Q8NHS0	232 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	TP53INP1	Q96A56	240 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	CRBN	Q96SW2	442 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	FOXQ1	Q9C009	403 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	C7orf69	Q9H7B7	122 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	PCDHB10	Q9UN67	800 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400		U3KQE9	123 aa		7.12	□□□□□ -1.27
CTNNA1-222	ENST00000520400	FAM95C	A0A1B0GW59	222 aa		7.11	□□□□□ -1.27
CTNNA1-222	ENST00000520400	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.11	□□□□□ -1.27
CTNNA1-222	ENST00000520400	RAB33A	Q14088	237 aa		7.11	□□□□□ -1.27
CTNNA1-222	ENST00000520400	PPP2R5E	Q16537	467 aa		7.11	□□□□□ -1.27
CTNNA1-222	ENST00000520400	MRM1	Q6IN84	353 aa	Known RBP	7.11	□□□□□ -1.27
CTNNA1-222	ENST00000520400	CDC37L1	Q7L3B6	337 aa		7.11	□□□□□ -1.27
CTNNA1-222	ENST00000520400	PPFIBP1	Q86W92	1011 aa		7.11	□□□□□ -1.27
CTNNA1-222	ENST00000520400	TM9SF2	Q99805	663 aa		7.11	□□□□□ -1.27
CTNNA1-222	ENST00000520400	KCNF1	Q9H3M0	494 aa		7.11	□□□□□ -1.27
CTNNA1-222	ENST00000520400	SSU72	Q9NP77	194 aa	Known RBP	7.11	□□□□□ -1.27
CTNNA1-222	ENST00000520400	RGS13	O14921	159 aa		7.1	□□□□□ -1.27
CTNNA1-222	ENST00000520400	LRIG2	O94898	1065 aa		7.1	□□□□□ -1.27
CTNNA1-222	ENST00000520400	EOMES	O95936	686 aa		7.1	□□□□□ -1.27
CTNNA1-222	ENST00000520400	DOC2B	Q14184	412 aa		7.1	□□□□□ -1.27
CTNNA1-222	ENST00000520400	NFKBIB	Q15653	356 aa		7.1	□□□□□ -1.27
CTNNA1-222	ENST00000520400	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.1	□□□□□ -1.27
CTNNA1-222	ENST00000520400	CCDC144B	Q3MJ40	725 aa		7.1	□□□□□ -1.27
CTNNA1-222	ENST00000520400	FAM214B	Q7L5A3	538 aa		7.1	□□□□□ -1.27
CTNNA1-222	ENST00000520400	TAB3	Q8N5C8	712 aa	Predicted RBP	7.1	□□□□□ -1.27
CTNNA1-222	ENST00000520400	ST7	Q9NRC1	585 aa		7.1	□□□□□ -1.27
CTNNA1-222	ENST00000520400	FAM221B	A6H8Z2	402 aa		7.09	□□□□□ -1.27
CTNNA1-222	ENST00000520400		C9IYK1	514 aa		7.09	□□□□□ -1.27
CTNNA1-222	ENST00000520400	DHX15	O43143	795 aa	Known RBP	7.09	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms