RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 VPS53Q5VIR6 699 aa26.95■■□□□ 1.9
SKP1-206ENST00000519321 CABP5Q9NP86 173 aa26.95■■□□□ 1.9
SKP1-206ENST00000519321 ZHX2Q9Y6X8 837 aa26.95■■□□□ 1.9
SKP1-206ENST00000519321 ROBO3Q96MS0 1386 aa26.95■■□□□ 1.9
SKP1-206ENST00000519321 LAMB1P07942 1786 aa26.94■■□□□ 1.9
SKP1-206ENST00000519321 TM4SF4P48230 202 aa26.94■■□□□ 1.9
SKP1-206ENST00000519321 SNAPC2Q13487 334 aa26.94■■□□□ 1.9
SKP1-206ENST00000519321 RRP1BQ14684 758 aaKnown RBP26.94■■□□□ 1.9
SKP1-206ENST00000519321 DYNLL2Q96FJ2 89 aa26.94■■□□□ 1.9
SKP1-206ENST00000519321 AS3MTQ9HBK9 375 aa26.94■■□□□ 1.9
SKP1-206ENST00000519321 ATAD5Q96QE3 1844 aa26.94■■□□□ 1.9
SKP1-206ENST00000519321 CEP350Q5VT06 3117 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 USP17L5A8MUK1 530 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 CXCL11O14625 94 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 IRF6O14896 467 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 FOXP2O15409 715 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 CDK8P49336 464 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 ABCB5Q2M3G0 1257 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 CCDC17Q96LX7 622 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 WBP1LQ9NX94 342 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 ZBTB21Q9ULJ3 1066 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 KCNH4Q9UQ05 1017 aa26.93■■□□□ 1.9
SKP1-206ENST00000519321 GDF11O95390 407 aa26.92■■□□□ 1.9
SKP1-206ENST00000519321 CETPP11597 493 aa26.92■■□□□ 1.9
SKP1-206ENST00000519321 EVX2Q03828 476 aa26.92■■□□□ 1.9
SKP1-206ENST00000519321 PPARAQ07869 468 aa26.92■■□□□ 1.9
SKP1-206ENST00000519321 DSCC1Q9BVC3 393 aa26.92■■□□□ 1.9
SKP1-206ENST00000519321 TESPA1A2RU30 521 aaPredicted RBP26.91■■□□□ 1.9
SKP1-206ENST00000519321 CA12O43570 354 aa26.91■■□□□ 1.9
SKP1-206ENST00000519321 FGAP02671 866 aa26.91■■□□□ 1.9
SKP1-206ENST00000519321 OTUD7BQ6GQQ9 843 aa26.91■■□□□ 1.9
SKP1-206ENST00000519321 CASC1Q6TDU7 716 aa26.91■■□□□ 1.9
SKP1-206ENST00000519321 MS4A4AQ96JQ5 239 aa26.91■■□□□ 1.9
SKP1-206ENST00000519321 AFG3L2Q9Y4W6 797 aa26.91■■□□□ 1.9
SKP1-206ENST00000519321 MYH8P13535 1937 aa26.9■■□□□ 1.9
SKP1-206ENST00000519321 GH2P01242 217 aa26.9■■□□□ 1.9
SKP1-206ENST00000519321 PDE4BQ07343 736 aa26.9■■□□□ 1.9
SKP1-206ENST00000519321 SLC44A5Q8NCS7 719 aa26.9■■□□□ 1.9
SKP1-206ENST00000519321 MKNK2Q9HBH9 465 aa26.9■■□□□ 1.9
SKP1-206ENST00000519321 CCL15-CCL14A0A0B4J2E2 113 aa26.89■■□□□ 1.9
SKP1-206ENST00000519321 ALDH1A1P00352 501 aa26.89■■□□□ 1.9
SKP1-206ENST00000519321 CCL15Q16663 113 aa26.89■■□□□ 1.9
SKP1-206ENST00000519321 ZNF280CQ8ND82 737 aa26.89■■□□□ 1.9
SKP1-206ENST00000519321 WDR18Q9BV38 432 aa26.89■■□□□ 1.9
SKP1-206ENST00000519321 ANAPC4Q9UJX5 808 aa26.89■■□□□ 1.9
SKP1-206ENST00000519321 MPHOSPH10O00566 681 aaKnown RBP26.88■■□□□ 1.89
SKP1-206ENST00000519321 SGSM2O43147 1006 aa26.88■■□□□ 1.89
SKP1-206ENST00000519321 TMEM179Q6ZVK1 233 aa26.88■■□□□ 1.89
SKP1-206ENST00000519321 CTNNA3Q9UI47 895 aa26.88■■□□□ 1.89
SKP1-206ENST00000519321 SMIM22K7EJ46 135 aa26.87■■□□□ 1.89
SKP1-206ENST00000519321 JAG1P78504 1218 aa26.87■■□□□ 1.89
SKP1-206ENST00000519321 FASTKD5Q7L8L6 764 aaKnown RBP26.87■■□□□ 1.89
SKP1-206ENST00000519321 IFNL1Q8IU54 200 aa26.87■■□□□ 1.89
SKP1-206ENST00000519321 SAGE1Q9NXZ1 904 aa26.87■■□□□ 1.89
SKP1-206ENST00000519321 PHIPQ8WWQ0 1821 aa26.87■■□□□ 1.89
SKP1-206ENST00000519321 TRIM75PA6NK02 468 aa26.86■■□□□ 1.89
SKP1-206ENST00000519321 CDC45O75419 566 aa26.86■■□□□ 1.89
SKP1-206ENST00000519321 HSPA1AP0DMV8 641 aaKnown RBP26.86■■□□□ 1.89
SKP1-206ENST00000519321 HSPA1BP0DMV9 641 aaKnown RBP26.86■■□□□ 1.89
SKP1-206ENST00000519321 SPP2Q13103 211 aa26.86■■□□□ 1.89
SKP1-206ENST00000519321 RAB3GAP1Q15042 981 aa26.86■■□□□ 1.89
SKP1-206ENST00000519321 ZNF444Q8N0Y2 327 aaPredicted RBP26.86■■□□□ 1.89
SKP1-206ENST00000519321 BRI3BPQ8WY22 251 aa26.86■■□□□ 1.89
SKP1-206ENST00000519321 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.86■■□□□ 1.89
SKP1-206ENST00000519321 A0A0G2JLL6 359 aaPredicted RBP26.85■■□□□ 1.89
SKP1-206ENST00000519321 PRRT2Q7Z6L0 340 aaPredicted RBP26.85■■□□□ 1.89
SKP1-206ENST00000519321 CCDC84Q86UT8 332 aaPredicted RBP26.85■■□□□ 1.89
SKP1-206ENST00000519321 IL25Q9H293 177 aa26.85■■□□□ 1.89
SKP1-206ENST00000519321 ZCCHC17Q9NP64 241 aaKnown RBP26.85■■□□□ 1.89
SKP1-206ENST00000519321 KIAA1211Q6ZU35 1233 aa26.84■■□□□ 1.89
SKP1-206ENST00000519321 STK11IPQ8N1F8 1099 aa26.84■■□□□ 1.89
SKP1-206ENST00000519321 RNF186Q9NXI6 227 aa26.84■■□□□ 1.89
SKP1-206ENST00000519321 C19orf81C9J6K1 198 aa26.83■■□□□ 1.89
SKP1-206ENST00000519321 USP17L10C9JJH3 530 aa26.83■■□□□ 1.89
SKP1-206ENST00000519321 ZNF213O14771 459 aa26.83■■□□□ 1.89
SKP1-206ENST00000519321 PCP11498 1178 aaKnown RBP26.83■■□□□ 1.89
SKP1-206ENST00000519321 AKR1B1P15121 316 aa26.83■■□□□ 1.89
SKP1-206ENST00000519321 RASA1P20936 1047 aa26.83■■□□□ 1.89
SKP1-206ENST00000519321 BACE1P56817 501 aa26.83■■□□□ 1.89
SKP1-206ENST00000519321 SHROOM1Q2M3G4 852 aaPredicted RBP26.83■■□□□ 1.89
SKP1-206ENST00000519321 ESYT1Q9BSJ8 1104 aa26.83■■□□□ 1.89
SKP1-206ENST00000519321 IGF2BP3O00425 579 aaKnown RBP eCLIP26.82■■□□□ 1.88
SKP1-206ENST00000519321 CTDSPL2Q05D32 466 aa26.82■■□□□ 1.88
SKP1-206ENST00000519321 SEPT2Q15019 361 aa26.82■■□□□ 1.88
SKP1-206ENST00000519321 IMMTQ16891 758 aaKnown RBP26.82■■□□□ 1.88
SKP1-206ENST00000519321 SH3D19Q5HYK7 790 aa26.82■■□□□ 1.88
SKP1-206ENST00000519321 ANKRD23Q86SG2 305 aa26.82■■□□□ 1.88
SKP1-206ENST00000519321 PROCA1Q8NCQ7 364 aaPredicted RBP26.82■■□□□ 1.88
SKP1-206ENST00000519321 PTPN18Q99952 460 aa26.82■■□□□ 1.88
SKP1-206ENST00000519321 RNF41Q9H4P4 317 aaPredicted RBP26.82■■□□□ 1.88
SKP1-206ENST00000519321 TRPA1O75762 1119 aa26.81■■□□□ 1.88
SKP1-206ENST00000519321 GUCY1A2P33402 732 aa26.81■■□□□ 1.88
SKP1-206ENST00000519321 KANSL2Q9H9L4 492 aa26.81■■□□□ 1.88
SKP1-206ENST00000519321 U3KPZ7 1027 aaPredicted RBP26.81■■□□□ 1.88
SKP1-206ENST00000519321 PRDM1O75626 825 aa26.8■■□□□ 1.88
SKP1-206ENST00000519321 FGRP09769 529 aa26.8■■□□□ 1.88
SKP1-206ENST00000519321 CTCFP49711 727 aaPredicted RBP26.8■■□□□ 1.88
SKP1-206ENST00000519321 NT5C2P49902 561 aa26.8■■□□□ 1.88
SKP1-206ENST00000519321 USP14P54578 494 aa26.8■■□□□ 1.88
SKP1-206ENST00000519321 GADL1Q6ZQY3 521 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms