RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 FGD1P98174 961 aa2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 ZC3H12AQ5D1E8 599 aaKnown RBP2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 UBXN11Q5T124 520 aa2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 CNKSR3Q6P9H4 555 aa2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 UBE3DQ7Z6J8 389 aa2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 SNX29Q8TEQ0 813 aa2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 NAF1Q96HR8 494 aaKnown RBP2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 C1QTNF3Q9BXJ4 246 aa2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 LIN7BQ9HAP6 207 aa2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 AMOTL2Q9Y2J4 779 aa2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 CAPN6Q9Y6Q1 641 aa2.42□□□□□ -2.02
SCARNA23-201ENST00000516060 RBAK-RBAKDNI3L0D1 243 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 GSTP1P09211 210 aaKnown RBP2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 ZNF20P17024 532 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 ITPKAP23677 461 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 NTF4P34130 210 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 KCNC1P48547 511 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 SRSF3P84103 164 aaKnown RBP2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 NR0B2Q15466 257 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 SFRP5Q5T4F7 317 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 TMPRSS7Q7RTY8 843 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 FERMT3Q86UX7 667 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 ZNF575Q86XF7 245 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 FAM129CQ86XR2 697 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 TTC16Q8NEE8 873 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 PPP1R12CQ9BZL4 782 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 PCED1AQ9H1Q7 454 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 CNTD2Q9H8S5 307 aa2.41□□□□□ -2.02
SCARNA23-201ENST00000516060 FITM1A5D6W6 292 aa2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 SLITRK5O94991 958 aa2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 POLR3DP05423 398 aaPredicted RBP2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 ZGLP1P0C6A0 271 aa2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 MZF1P28698 734 aaPredicted RBP2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 CRIP3Q6Q6R5 217 aa2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 OXR1Q8N573 874 aa2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 SHISA4Q96DD7 197 aa2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 ZFYVE28Q9HCC9 887 aa2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 SIRT5Q9NXA8 310 aa2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 CXXC1Q9P0U4 656 aaPredicted RBP2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 ACIN1Q9UKV3 1341 aaKnown RBP2.4□□□□□ -2.03
SCARNA23-201ENST00000516060 WASH4PA8MWX3 477 aa2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 HRKO00198 91 aa2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 ITGB3P05106 788 aa2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 SLURP1P55000 103 aa2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 FAM69CQ0P6D2 419 aa2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 SNX17Q15036 470 aa2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 ARMCX6Q7L4S7 300 aa2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 PDZD3Q86UT5 571 aa2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 GLMNQ92990 594 aa2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 PWWP2AQ96N64 755 aa2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 RBM15Q96T37 977 aaKnown RBP eCLIP2.39□□□□□ -2.03
SCARNA23-201ENST00000516060 OR14I1A6ND48 311 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 FFAR3O14843 346 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 FZD7O75084 574 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 LMOD1P29536 600 aaPredicted RBP2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 VIPR1P32241 457 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 RGS19P49795 217 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 GALK1P51570 392 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 ZNF157P51786 506 aaPredicted RBP2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 CDR1P51861 262 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 KRTAP10-9P60411 292 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 HNRNPUQ00839 825 aaKnown RBP eCLIP2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 PTPN12Q05209 780 aaKnown RBP2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 FAAP100Q0VG06 881 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 PPM1JQ5JR12 505 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 SPRED1Q7Z699 444 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 CREG2Q8IUH2 290 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 GALNT12Q8IXK2 581 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 MZB1Q8WU39 189 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 PPP1R13LQ8WUF5 828 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 C8orf49Q96NF6 230 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 GPR160Q9UJ42 338 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 TPX2Q9ULW0 747 aaKnown RBP2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 POLIQ9UNA4 740 aa2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 NOVA2Q9UNW9 492 aaKnown RBP2.38□□□□□ -2.03
SCARNA23-201ENST00000516060 RAD21O60216 631 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 LRIG2O94898 1065 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 CBX7O95931 251 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 PLCB3Q01970 1234 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 RING1Q06587 406 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 TNK2Q07912 1038 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 GAB4Q2WGN9 574 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 NOM1Q5C9Z4 860 aaKnown RBP2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 RPS26P11Q5JNZ5 115 aaPredicted RBP2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 ADGRF1Q5T601 910 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 USP51Q70EK9 711 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 IGDCC3Q8IVU1 814 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 KCNB2Q92953 911 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 NECAB3Q96P71 396 aaPredicted RBP2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 C11orf21Q9P2W6 132 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 DUSP10Q9Y6W6 482 aa2.37□□□□□ -2.03
SCARNA23-201ENST00000516060 ATXN1P54253 815 aaKnown RBP2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 CAP1Q01518 475 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 KLF10Q13118 480 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 ZBTB37Q5TC79 503 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 NT5DC1Q5TFE4 455 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 KIAA0319Q5VV43 1072 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 SPPL2CQ8IUH8 684 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 TTC9BQ8N6N2 239 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms