RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	C8orf34	Q49A92	452 aa		11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	AKNAD1	Q5T1N1	836 aa		11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	USP26	Q9BXU7	913 aa		11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	RNF41	Q9H4P4	317 aa	Predicted RBP	11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	CABP5	Q9NP86	173 aa		11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	TOMM22	Q9NS69	142 aa		11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	GINM1	Q9NU53	330 aa		11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.73	□□□□□ -0.53
RACK1-233	ENST00000514455	ROBO3	Q96MS0	1386 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	PRDM1	O75626	825 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	GDF11	O95390	407 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	ASNS	P08243	561 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	PC	P11498	1178 aa	Known RBP	11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	HSPA6	P17066	643 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	ZNF157	P51786	506 aa	Predicted RBP	11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	VGLL4	Q14135	290 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	ABCB5	Q2M3G0	1257 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	DEFB115	Q30KQ5	88 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	RRP12	Q5JTH9	1297 aa	Known RBP	11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	NOL9	Q5SY16	702 aa	Known RBP	11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	RNF20	Q5VTR2	975 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	RGMB	Q6NW40	437 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	SCYL3	Q8IZE3	742 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	STAG1	Q8WVM7	1258 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	HHIPL1	Q96JK4	782 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	CLMN	Q96JQ2	1002 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	ELP3	Q9H9T3	547 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	PICK1	Q9NRD5	415 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	TACC3	Q9Y6A5	838 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	PAPPA2	Q9BXP8	1791 aa		11.72	□□□□□ -0.53
RACK1-233	ENST00000514455	MPHOSPH10	O00566	681 aa	Known RBP	11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	SLC27A2	O14975	620 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	ORC4	O43929	436 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	RANBP6	O60518	1105 aa	Known RBP	11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	SEC24B	O95487	1268 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	GH2	P01242	217 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	RASA1	P20936	1047 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	TFAP4	Q01664	338 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	TRDN	Q13061	729 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	CREB3L3	Q68CJ9	461 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	ERO1B	Q86YB8	467 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	TBC1D10C	Q8IV04	446 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	CCDC102A	Q96A19	550 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	KRT23	Q9C075	422 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	NBPF3	Q9H094	633 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	SNCAIP	Q9Y6H5	919 aa		11.71	□□□□□ -0.53
RACK1-233	ENST00000514455	SIPA1L1	O43166	1804 aa		11.71	□□□□□ -0.54
RACK1-233	ENST00000514455	DDX60L	Q5H9U9	1706 aa	Known RBP	11.71	□□□□□ -0.54
RACK1-233	ENST00000514455	RASSF10	A6NK89	507 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	TSPY2	A6NKD2	308 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	USP17L5	A8MUK1	530 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	AKR1B1	P15121	316 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	ZKSCAN1	P17029	563 aa	Predicted RBP	11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	PTPRA	P18433	802 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	HSPA4	P34932	840 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	JAG1	P78504	1218 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	HTRA3	P83110	453 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	TMEM179	Q6ZVK1	233 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	ESR2	Q92731	530 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	CNNM2	Q9H8M5	875 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	ZBTB21	Q9ULJ3	1066 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	ZHX2	Q9Y6X8	837 aa		11.7	□□□□□ -0.54
RACK1-233	ENST00000514455	SPDYE5	A6NIY4	337 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455		E7EWF7	191 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	TSPY3	P0CV98	308 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	TSPY8	P0CW00	308 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	MCC	P23508	829 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	NT5C2	P49902	561 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	PPAT	Q06203	517 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	SEPT2	Q15019	361 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	RAB3GAP1	Q15042	981 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	TSGA10IP	Q3SY00	556 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	FAM47A	Q5JRC9	791 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	RASEF	Q8IZ41	740 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	NEDD1	Q8NHV4	660 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	NCOA7	Q8NI08	942 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	KCNB2	Q92953	911 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	OPTN	Q96CV9	577 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455	KANSL2	Q9H9L4	492 aa		11.69	□□□□□ -0.54
RACK1-233	ENST00000514455		B4E1Z4	1266 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	CXCL11	O14625	94 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	KDM4A	O75164	1064 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	GUCY1A2	P33402	732 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	ECE1	P42892	770 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	KRT32	Q14532	448 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	SPRYD7	Q5W111	196 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	CYP4F22	Q6NT55	531 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	STOX1	Q6ZVD7	989 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	CCDC84	Q86UT8	332 aa	Predicted RBP	11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	OTUD5	Q96G74	571 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	WNK4	Q96J92	1243 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	WDR18	Q9BV38	432 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	TBC1D2	Q9BYX2	928 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	AS3MT	Q9HBK9	375 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	ZSWIM5	Q9P217	1185 aa		11.68	□□□□□ -0.54
RACK1-233	ENST00000514455	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.68	□□□□□ -0.54

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