RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 COA7Q96BR5 231 aa14.91□□□□□ -0.02
SNHG4-208ENST00000514110 TAOK2Q9UL54 1235 aa14.91□□□□□ -0.02
SNHG4-208ENST00000514110 COLQQ9Y215 455 aaPredicted RBP14.91□□□□□ -0.02
SNHG4-208ENST00000514110 AACSQ86V21 672 aa14.9□□□□□ -0.02
SNHG4-208ENST00000514110 TRIM34Q9BYJ4 488 aa14.9□□□□□ -0.02
SNHG4-208ENST00000514110 ZBTB21Q9ULJ3 1066 aa14.9□□□□□ -0.02
SNHG4-208ENST00000514110 DOCK3Q8IZD9 2030 aa14.9□□□□□ -0.02
SNHG4-208ENST00000514110 PEX10O60683 326 aa14.89□□□□□ -0.03
SNHG4-208ENST00000514110 SGPL1O95470 568 aa14.89□□□□□ -0.03
SNHG4-208ENST00000514110 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
SNHG4-208ENST00000514110 HOXA7P31268 230 aaPredicted RBP14.89□□□□□ -0.03
SNHG4-208ENST00000514110 ERC1Q8IUD2 1116 aa14.89□□□□□ -0.03
SNHG4-208ENST00000514110 DPF3Q92784 378 aa14.89□□□□□ -0.03
SNHG4-208ENST00000514110 P2RX7Q99572 595 aaKnown RBP14.89□□□□□ -0.03
SNHG4-208ENST00000514110 IL1RAPL2Q9NP60 686 aa14.89□□□□□ -0.03
SNHG4-208ENST00000514110 TMOD4Q9NZQ9 345 aa14.89□□□□□ -0.03
SNHG4-208ENST00000514110 GJD2Q9UKL4 321 aa14.89□□□□□ -0.03
SNHG4-208ENST00000514110 MYH1P12882 1939 aa14.88□□□□□ -0.03
SNHG4-208ENST00000514110 USP17L10C9JJH3 530 aa14.88□□□□□ -0.03
SNHG4-208ENST00000514110 FARP2O94887 1054 aaPredicted RBP14.88□□□□□ -0.03
SNHG4-208ENST00000514110 USP5P45974 858 aa14.88□□□□□ -0.03
SNHG4-208ENST00000514110 IRX3P78415 501 aaPredicted RBP14.88□□□□□ -0.03
SNHG4-208ENST00000514110 DEFB118Q96PH6 123 aa14.88□□□□□ -0.03
SNHG4-208ENST00000514110 PAK6Q9NQU5 681 aaPredicted RBP14.88□□□□□ -0.03
SNHG4-208ENST00000514110 GINM1Q9NU53 330 aa14.88□□□□□ -0.03
SNHG4-208ENST00000514110 MORF4L1Q9UBU8 362 aa14.88□□□□□ -0.03
SNHG4-208ENST00000514110 C19orf81C9J6K1 198 aa14.87□□□□□ -0.03
SNHG4-208ENST00000514110 GH2P01242 217 aa14.87□□□□□ -0.03
SNHG4-208ENST00000514110 FXR1P51114 621 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNHG4-208ENST00000514110 HERVK_113P62684 666 aa14.87□□□□□ -0.03
SNHG4-208ENST00000514110 MAP3K12Q12852 859 aa14.87□□□□□ -0.03
SNHG4-208ENST00000514110 CERS3Q8IU89 383 aa14.87□□□□□ -0.03
SNHG4-208ENST00000514110 RHPN1Q8TCX5 695 aa14.87□□□□□ -0.03
SNHG4-208ENST00000514110 RIOK1Q9BRS2 568 aaKnown RBP14.87□□□□□ -0.03
SNHG4-208ENST00000514110 TXNRD2Q9NNW7 524 aa14.87□□□□□ -0.03
SNHG4-208ENST00000514110 PLXNB2O15031 1838 aa14.87□□□□□ -0.03
SNHG4-208ENST00000514110 TFRCP02786 760 aaKnown RBP14.86□□□□□ -0.03
SNHG4-208ENST00000514110 TRIM32Q13049 653 aa14.86□□□□□ -0.03
SNHG4-208ENST00000514110 HSP90AB4PQ58FF6 505 aa14.86□□□□□ -0.03
SNHG4-208ENST00000514110 TATDN1Q6P1N9 297 aa14.86□□□□□ -0.03
SNHG4-208ENST00000514110 POTEEQ6S8J3 1075 aa14.86□□□□□ -0.03
SNHG4-208ENST00000514110 HTATIP2Q9BUP3 242 aa14.86□□□□□ -0.03
SNHG4-208ENST00000514110 CRISPLD2Q9H0B8 497 aa14.86□□□□□ -0.03
SNHG4-208ENST00000514110 EMILIN3Q9NT22 766 aa14.86□□□□□ -0.03
SNHG4-208ENST00000514110 SERPINB13Q9UIV8 391 aa14.86□□□□□ -0.03
SNHG4-208ENST00000514110 APBB1O00213 710 aa14.85□□□□□ -0.03
SNHG4-208ENST00000514110 HMGCRP04035 888 aa14.85□□□□□ -0.03
SNHG4-208ENST00000514110 USP17L2Q6R6M4 530 aa14.85□□□□□ -0.03
SNHG4-208ENST00000514110 CHRDL2Q6WN34 429 aa14.85□□□□□ -0.03
SNHG4-208ENST00000514110 SIRT2Q8IXJ6 389 aa14.85□□□□□ -0.03
SNHG4-208ENST00000514110 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.85□□□□□ -0.032e-8■■□□□ 12.4
SNHG4-208ENST00000514110 EHD4Q9H223 541 aa14.85□□□□□ -0.03
SNHG4-208ENST00000514110 RBPJLQ9UBG7 517 aa14.85□□□□□ -0.03
SNHG4-208ENST00000514110 DDX60LQ5H9U9 1706 aaKnown RBP14.85□□□□□ -0.03
SNHG4-208ENST00000514110 MS4A1P11836 297 aa14.84□□□□□ -0.03
SNHG4-208ENST00000514110 PDE6AP16499 860 aa14.84□□□□□ -0.03
SNHG4-208ENST00000514110 PLCD1P51178 756 aa14.84□□□□□ -0.03
SNHG4-208ENST00000514110 Q3C1V9 767 aa14.84□□□□□ -0.03
SNHG4-208ENST00000514110 TMED8Q6PL24 325 aaPredicted RBP14.84□□□□□ -0.03
SNHG4-208ENST00000514110 RPAP2Q8IXW5 612 aaPredicted RBP14.84□□□□□ -0.03
SNHG4-208ENST00000514110 GPRC5AQ8NFJ5 357 aa14.84□□□□□ -0.03
SNHG4-208ENST00000514110 ZBTB40Q9NUA8 1239 aa14.84□□□□□ -0.03
SNHG4-208ENST00000514110 COG6Q9Y2V7 657 aa14.84□□□□□ -0.03
SNHG4-208ENST00000514110 MAGEB6P1A0A0J9YX57 407 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 CAPN2P17655 700 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 CYP2B6P20813 491 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 SHMT1P34896 483 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 ERVK-9P63128 1117 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 ERVK-24P63145 666 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 EVX2Q03828 476 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 RAB3GAP1Q15042 981 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 TTF1Q15361 905 aaPredicted RBP14.83□□□□□ -0.04
SNHG4-208ENST00000514110 ZYXQ15942 572 aaKnown RBP14.83□□□□□ -0.04
SNHG4-208ENST00000514110 CERKLQ49MI3 558 aaPredicted RBP14.83□□□□□ -0.04
SNHG4-208ENST00000514110 SLC9C2Q5TAH2 1124 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 TTC6Q86TZ1 520 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 TRIB2Q92519 343 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 KIF1BPQ96EK5 621 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 PAWRQ96IZ0 340 aaKnown RBP14.83□□□□□ -0.04
SNHG4-208ENST00000514110 DNAJC2Q99543 621 aaKnown RBP14.83□□□□□ -0.04
SNHG4-208ENST00000514110 PAGR1Q9BTK6 254 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 BCL11AQ9H165 835 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 PORCNQ9H237 461 aa14.83□□□□□ -0.04
SNHG4-208ENST00000514110 NAV1Q8NEY1 1877 aa14.82□□□□□ -0.04
SNHG4-208ENST00000514110 TCRBV5S4A2TA0A5A2 114 aa14.82□□□□□ -0.04
SNHG4-208ENST00000514110 GOLIM4O00461 696 aa14.82□□□□□ -0.04
SNHG4-208ENST00000514110 HMMRO75330 724 aa14.82□□□□□ -0.04
SNHG4-208ENST00000514110 IFIT2P09913 472 aaKnown RBP14.82□□□□□ -0.04
SNHG4-208ENST00000514110 ABCB5Q2M3G0 1257 aa14.82□□□□□ -0.04
SNHG4-208ENST00000514110 CLASRPQ8N2M8 674 aaKnown RBP14.82□□□□□ -0.04
SNHG4-208ENST00000514110 ACER1Q8TDN7 264 aa14.82□□□□□ -0.04
SNHG4-208ENST00000514110 DIS3LQ8TF46 1054 aaKnown RBP14.82□□□□□ -0.04
SNHG4-208ENST00000514110 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.82□□□□□ -0.04
SNHG4-208ENST00000514110 EDC3Q96F86 508 aaKnown RBP14.82□□□□□ -0.04
SNHG4-208ENST00000514110 C12orf42Q96LP6 360 aa14.82□□□□□ -0.04
SNHG4-208ENST00000514110 RBM27Q9P2N5 1060 aaKnown RBP14.82□□□□□ -0.04
SNHG4-208ENST00000514110 DDX19BQ9UMR2 479 aa14.82□□□□□ -0.04
SNHG4-208ENST00000514110 RPTORQ8N122 1335 aa14.82□□□□□ -0.04
SNHG4-208ENST00000514110 ZNF532Q9HCE3 1301 aa14.82□□□□□ -0.04
SNHG4-208ENST00000514110 CEP290O15078 2479 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms