RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 NEDD4P46934 1319 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 DDTLA6NHG4 134 aaPredicted RBP12.79□□□□□ -0.36
PFDN1-204ENST00000512707 B4E1Z4 1266 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 PRC1O43663 620 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 FGRP09769 529 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 TSPY3P0CV98 308 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 TSPY8P0CW00 308 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 NF2P35240 595 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 HIRAP54198 1017 aaPredicted RBP12.79□□□□□ -0.36
PFDN1-204ENST00000512707 SUPT20HL1Q3ZLR7 823 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 HSCBQ8IWL3 235 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 ZFPM1Q8IX07 1006 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 DYNLL2Q96FJ2 89 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 TMEM87BQ96K49 555 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 CCDC17Q96LX7 622 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 MTA3Q9BTC8 594 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.36
PFDN1-204ENST00000512707 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
PFDN1-204ENST00000512707 TAF6LQ9Y6J9 622 aa12.79□□□□□ -0.36
PFDN1-204ENST00000512707 PRDM1O75626 825 aa12.78□□□□□ -0.36
PFDN1-204ENST00000512707 KRT26Q7Z3Y9 468 aa12.78□□□□□ -0.36
PFDN1-204ENST00000512707 MB21D2Q8IYB1 491 aaPredicted RBP12.78□□□□□ -0.36
PFDN1-204ENST00000512707 ASTN2O75129 1339 aaPredicted RBP12.78□□□□□ -0.36
PFDN1-204ENST00000512707 IFIT3O14879 490 aaKnown RBP12.77□□□□□ -0.37
PFDN1-204ENST00000512707 TBC1D12O60347 775 aa12.77□□□□□ -0.37
PFDN1-204ENST00000512707 GABPAQ06546 454 aa12.77□□□□□ -0.37
PFDN1-204ENST00000512707 CERKLQ49MI3 558 aaPredicted RBP12.77□□□□□ -0.37
PFDN1-204ENST00000512707 TMEM67Q5HYA8 995 aa12.77□□□□□ -0.37
PFDN1-204ENST00000512707 SH3BP5LQ7L8J4 393 aa12.77□□□□□ -0.37
PFDN1-204ENST00000512707 METTL16Q86W50 562 aaKnown RBP12.77□□□□□ -0.37
PFDN1-204ENST00000512707 TMTC2Q8N394 836 aa12.77□□□□□ -0.37
PFDN1-204ENST00000512707 ALDH8A1Q9H2A2 487 aaPredicted RBP12.77□□□□□ -0.37
PFDN1-204ENST00000512707 CABP5Q9NP86 173 aa12.77□□□□□ -0.37
PFDN1-204ENST00000512707 MPHOSPH10O00566 681 aaKnown RBP12.76□□□□□ -0.37
PFDN1-204ENST00000512707 CPA1P15085 419 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 RASA1P20936 1047 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 TFAP4Q01664 338 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 EXOSC10Q01780 885 aaKnown RBP12.76□□□□□ -0.37
PFDN1-204ENST00000512707 SYNE3Q6ZMZ3 975 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 NFXL1Q6ZNB6 911 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 CDC37L1Q7L3B6 337 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 LDHDQ86WU2 507 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 SLC44A5Q8NCS7 719 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 SNX21Q969T3 373 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 ZSCAN10Q96SZ4 725 aaPredicted RBP12.76□□□□□ -0.37
PFDN1-204ENST00000512707 ZSWIM5Q9P217 1185 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 PGAP2Q9UHJ9 254 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 ANGEL1Q9UNK9 670 aaKnown RBP12.76□□□□□ -0.37
PFDN1-204ENST00000512707 SSUH2Q9Y2M2 353 aa12.76□□□□□ -0.37
PFDN1-204ENST00000512707 CCDC69A6NI79 296 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 POTECB2RU33 542 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 SHMT1P34896 483 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 AK2P54819 239 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 EVX2Q03828 476 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 WTAPQ15007 396 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 FAM47AQ5JRC9 791 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 TATDN1Q6P1N9 297 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 Q6ZUG5 572 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 CYB5R4Q7L1T6 521 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 TNS4Q8IZW8 715 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 FBXL16Q8N461 479 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 ZSCAN31Q96LW9 406 aaPredicted RBP12.75□□□□□ -0.37
PFDN1-204ENST00000512707 TEPSINQ96N21 525 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 TTC14Q96N46 770 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 ZNF341Q9BYN7 854 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 INCENPQ9NQS7 918 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 LIMCH1Q9UPQ0 1083 aa12.75□□□□□ -0.37
PFDN1-204ENST00000512707 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 TNKSO95271 1327 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 SMIM22K7EJ46 135 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 PPP1R12BO60237 982 aaPredicted RBP12.74□□□□□ -0.37
PFDN1-204ENST00000512707 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
PFDN1-204ENST00000512707 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
PFDN1-204ENST00000512707 IFIT1BQ5T764 474 aaKnown RBP12.74□□□□□ -0.37
PFDN1-204ENST00000512707 NBPF12Q5TAG4 269 aaPredicted RBP12.74□□□□□ -0.37
PFDN1-204ENST00000512707 TMEM179Q6ZVK1 233 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 MIGA2Q7L4E1 593 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 CHST3Q7LGC8 479 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 NEDD1Q8NHV4 660 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 BRF1Q92994 677 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 TCEANC2Q96MN5 208 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 SH2B1Q9NRF2 756 aaPredicted RBP12.74□□□□□ -0.37
PFDN1-204ENST00000512707 GINM1Q9NU53 330 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 TCP11L1Q9NUJ3 509 aa12.74□□□□□ -0.37
PFDN1-204ENST00000512707 NAP1L2Q9ULW6 460 aaPredicted RBP12.74□□□□□ -0.37
PFDN1-204ENST00000512707 SCAF8Q9UPN6 1271 aaKnown RBP12.74□□□□□ -0.37
PFDN1-204ENST00000512707 FAM196BA6NMK8 535 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 ADM5C9JUS6 153 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 K7ELQ4 463 aaPredicted RBP12.73□□□□□ -0.37
PFDN1-204ENST00000512707 SH2B2O14492 632 aaPredicted RBP12.73□□□□□ -0.37
PFDN1-204ENST00000512707 HSPA1AP0DMV8 641 aaKnown RBP12.73□□□□□ -0.37
PFDN1-204ENST00000512707 HSPA1BP0DMV9 641 aaKnown RBP12.73□□□□□ -0.37
PFDN1-204ENST00000512707 LIFRP42702 1097 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 ANTXR2P58335 489 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 MAP3K10Q02779 954 aa12.73□□□□□ -0.37
PFDN1-204ENST00000512707 NOL8Q76FK4 1167 aaKnown RBP12.73□□□□□ -0.37
PFDN1-204ENST00000512707 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms