RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 TREML2Q5T2D2 321 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 ZSCAN25Q6NSZ9 544 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 TATDN1Q6P1N9 297 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 CTR9Q6PD62 1173 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 STK11IPQ8N1F8 1099 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 CFHR5Q9BXR6 569 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 SERPINB13Q9UIV8 391 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 ZBTB21Q9ULJ3 1066 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 A0A0G2JLL6 359 aaPredicted RBP16.33■□□□□ 0.2
SNF8-206ENST00000509989 GH2P01242 217 aa16.33■□□□□ 0.2
SNF8-206ENST00000509989 TAF1CQ15572 869 aaPredicted RBP16.33■□□□□ 0.2
SNF8-206ENST00000509989 GADL1Q6ZQY3 521 aa16.33■□□□□ 0.2
SNF8-206ENST00000509989 PRRT2Q7Z6L0 340 aaPredicted RBP16.33■□□□□ 0.2
SNF8-206ENST00000509989 CERS3Q8IU89 383 aa16.33■□□□□ 0.2
SNF8-206ENST00000509989 CLEC10AQ8IUN9 316 aa16.33■□□□□ 0.2
SNF8-206ENST00000509989 FAM227BQ96M60 508 aa16.33■□□□□ 0.2
SNF8-206ENST00000509989 MCOLN1Q9GZU1 580 aa16.33■□□□□ 0.2
SNF8-206ENST00000509989 EHD4Q9H223 541 aa16.33■□□□□ 0.2
SNF8-206ENST00000509989 MGAMO43451 1857 aa16.33■□□□□ 0.2
SNF8-206ENST00000509989 A0A0D9SFI3 127 aa16.32■□□□□ 0.2
SNF8-206ENST00000509989 PDHXO00330 501 aa16.32■□□□□ 0.2
SNF8-206ENST00000509989 CXCL11O14625 94 aa16.32■□□□□ 0.2
SNF8-206ENST00000509989 CYP2C8P10632 490 aa16.32■□□□□ 0.2
SNF8-206ENST00000509989 C12orf60Q5U649 245 aa16.32■□□□□ 0.2
SNF8-206ENST00000509989 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
SNF8-206ENST00000509989 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
SNF8-206ENST00000509989 ADGRA2Q96PE1 1338 aa16.32■□□□□ 0.2
SNF8-206ENST00000509989 DOCK3Q8IZD9 2030 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 GREB1LQ9C091 1923 aaPredicted RBP16.31■□□□□ 0.2
SNF8-206ENST00000509989 USP17L5A8MUK1 530 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 ALDH1A1P00352 501 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 CTGFP29279 349 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 HMGCS2P54868 508 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 ANKRD23Q86SG2 305 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 CD99L2Q8TCZ2 262 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 ACER1Q8TDN7 264 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 EVI5LQ96CN4 794 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 TRIM34Q9BYJ4 488 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 ARHGAP39Q9C0H5 1083 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 OSBPL3Q9H4L5 887 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 ATP8A2Q9NTI2 1148 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 CPA4Q9UI42 421 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 TACC3Q9Y6A5 838 aa16.31■□□□□ 0.2
SNF8-206ENST00000509989 TRIM6-TRIM34B2RNG4 842 aa16.3■□□□□ 0.2
SNF8-206ENST00000509989 PEX10O60683 326 aa16.3■□□□□ 0.2
SNF8-206ENST00000509989 FKTNO75072 461 aa16.3■□□□□ 0.2
SNF8-206ENST00000509989 CAPN15O75808 1086 aa16.3■□□□□ 0.2
SNF8-206ENST00000509989 ZFYP08048 801 aaPredicted RBP16.3■□□□□ 0.2
SNF8-206ENST00000509989 AKR1B1P15121 316 aa16.3■□□□□ 0.2
SNF8-206ENST00000509989 GSPT1P15170 499 aaKnown RBP16.3■□□□□ 0.2
SNF8-206ENST00000509989 NMIQ13287 307 aaPredicted RBP16.3■□□□□ 0.2
SNF8-206ENST00000509989 MTMR2Q13614 643 aa16.3■□□□□ 0.2
SNF8-206ENST00000509989 SEPT2Q15019 361 aa16.3■□□□□ 0.2
SNF8-206ENST00000509989 CERKLQ49MI3 558 aaPredicted RBP16.3■□□□□ 0.2
SNF8-206ENST00000509989 ZNF280CQ8ND82 737 aa16.3■□□□□ 0.2
SNF8-206ENST00000509989 CDK8P49336 464 aa16.29■□□□□ 0.2
SNF8-206ENST00000509989 ABCB5Q2M3G0 1257 aa16.29■□□□□ 0.2
SNF8-206ENST00000509989 OTUD7BQ6GQQ9 843 aa16.29■□□□□ 0.2
SNF8-206ENST00000509989 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
SNF8-206ENST00000509989 IL25Q9H293 177 aa16.29■□□□□ 0.2
SNF8-206ENST00000509989 A0A1W2PRG0 241 aa16.28■□□□□ 0.2
SNF8-206ENST00000509989 MINDY4BA8MYZ0 360 aa16.28■□□□□ 0.2
SNF8-206ENST00000509989 ASNSP08243 561 aa16.28■□□□□ 0.2
SNF8-206ENST00000509989 RAB3GAP1Q15042 981 aa16.28■□□□□ 0.2
SNF8-206ENST00000509989 ZYXQ15942 572 aaKnown RBP16.28■□□□□ 0.2
SNF8-206ENST00000509989 SIAH1Q8IUQ4 282 aa16.28■□□□□ 0.2
SNF8-206ENST00000509989 IFNL3Q8IZI9 196 aa16.28■□□□□ 0.2
SNF8-206ENST00000509989 WDR18Q9BV38 432 aa16.28■□□□□ 0.2
SNF8-206ENST00000509989 ZFYVE28Q9HCC9 887 aa16.28■□□□□ 0.2
SNF8-206ENST00000509989 INCENPQ9NQS7 918 aa16.28■□□□□ 0.2
SNF8-206ENST00000509989 RLFQ13129 1914 aa16.27■□□□□ 0.2
SNF8-206ENST00000509989 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
SNF8-206ENST00000509989 TLR2O60603 784 aa16.27■□□□□ 0.2
SNF8-206ENST00000509989 NOM1Q5C9Z4 860 aaKnown RBP16.27■□□□□ 0.2
SNF8-206ENST00000509989 SH3D19Q5HYK7 790 aa16.27■□□□□ 0.2
SNF8-206ENST00000509989 KIAA1755Q5JYT7 1200 aa16.27■□□□□ 0.2
SNF8-206ENST00000509989 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
SNF8-206ENST00000509989 C17orf99Q6UX52 265 aa16.27■□□□□ 0.2
SNF8-206ENST00000509989 C16orf86Q6ZW13 317 aa16.27■□□□□ 0.2
SNF8-206ENST00000509989 ABHD8Q96I13 439 aa16.27■□□□□ 0.2
SNF8-206ENST00000509989 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNF8-206ENST00000509989 EMILIN3Q9NT22 766 aa16.27■□□□□ 0.2
SNF8-206ENST00000509989 MYH4Q9Y623 1939 aa16.27■□□□□ 0.19
SNF8-206ENST00000509989 PARP14Q460N5 1801 aa16.26■□□□□ 0.19
SNF8-206ENST00000509989 MPHOSPH10O00566 681 aaKnown RBP16.26■□□□□ 0.19
SNF8-206ENST00000509989 PRDM1O75626 825 aa16.26■□□□□ 0.19
SNF8-206ENST00000509989 APPP05067 770 aa16.26■□□□□ 0.19
SNF8-206ENST00000509989 SDSP20132 328 aa16.26■□□□□ 0.19
SNF8-206ENST00000509989 BACE1P56817 501 aa16.26■□□□□ 0.19
SNF8-206ENST00000509989 SP3Q02447 781 aa16.26■□□□□ 0.19
SNF8-206ENST00000509989 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
SNF8-206ENST00000509989 CTU1Q7Z7A3 348 aaKnown RBP16.26■□□□□ 0.19
SNF8-206ENST00000509989 NKX2-3Q8TAU0 364 aa16.26■□□□□ 0.19
SNF8-206ENST00000509989 AGTPBP1Q9UPW5 1226 aa16.26■□□□□ 0.19
SNF8-206ENST00000509989 HTTP42858 3142 aa16.25■□□□□ 0.19
SNF8-206ENST00000509989 TTC22Q5TAA0 569 aa16.25■□□□□ 0.19
SNF8-206ENST00000509989 IFFO2Q5TF58 517 aa16.25■□□□□ 0.19
SNF8-206ENST00000509989 FASTKD5Q7L8L6 764 aaKnown RBP16.25■□□□□ 0.19
SNF8-206ENST00000509989 OTOP1Q7RTM1 612 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms