RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 MAN1B1Q9UKM7 699 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 C21orf2O43822 256 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 PIP4K2BP78356 416 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 KRT26Q7Z3Y9 468 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 SMARCC2Q8TAQ2 1214 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 NUP133Q8WUM0 1156 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 JAKMIP2Q96AA8 810 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 ZIM3Q96PE6 472 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 OSBPL7Q9BZF2 842 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 BLZF1Q9H2G9 400 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 KCNH3Q9ULD8 1083 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 SAMD9LQ8IVG5 1584 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 KLF18A0A0U1RQI7 1052 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 hCG_1642624A0A1W2PR95 340 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 A8MUI8 341 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 DIAPH2O60879 1101 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 GIGYF1O75420 1035 aaPredicted RBP8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 GYPCP04921 128 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 CD44P16070 742 aaKnown RBP8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 KRT9P35527 623 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 PROSER3Q2NL68 480 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 ODF2Q5BJF6 829 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 CCDC102BQ68D86 513 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 SPICE1Q8N0Z3 855 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 CCDC26Q8TAB7 109 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 TBC1D22AQ8WUA7 517 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 TATDN2Q93075 761 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 ETAA1Q9NY74 926 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 SAR1BQ9Y6B6 198 aa8.16□□□□□ -1.1
LIMCH1-207ENST00000508466 N4BP3O15049 544 aa8.15□□□□□ -1.1
LIMCH1-207ENST00000508466 KCNJ6P48051 423 aa8.15□□□□□ -1.1
LIMCH1-207ENST00000508466 SCNN1BP51168 640 aa8.15□□□□□ -1.1
LIMCH1-207ENST00000508466 ENOX2Q16206 610 aaKnown RBP8.15□□□□□ -1.1
LIMCH1-207ENST00000508466 ZC3H12AQ5D1E8 599 aaKnown RBP8.15□□□□□ -1.1
LIMCH1-207ENST00000508466 SLC17A8Q8NDX2 589 aa8.15□□□□□ -1.1
LIMCH1-207ENST00000508466 MDM1Q8TC05 714 aa8.15□□□□□ -1.1
LIMCH1-207ENST00000508466 NUP58Q9BVL2 599 aa8.15□□□□□ -1.1
LIMCH1-207ENST00000508466 SENP2Q9HC62 589 aa8.15□□□□□ -1.1
LIMCH1-207ENST00000508466 NFU1Q9UMS0 254 aa8.15□□□□□ -1.1
LIMCH1-207ENST00000508466 GOLGA6L9A6NEM1 432 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 SMIM23A6NLE4 172 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 GOLGA8BA8MQT2 603 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 POTEB2H3BUK9 544 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 IKBKBO14920 756 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 RASSF9O75901 435 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 POLA2Q14181 598 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 NFXL1Q6ZNB6 911 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 NLRP14Q86W24 1093 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 KIF2BQ8N4N8 673 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 RASSF8Q8NHQ8 419 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 GPATCH3Q96I76 525 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 LRRC4CQ9HCJ2 640 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 SLC39A2Q9NP94 309 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 KCNJ14Q9UNX9 436 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 STK38LQ9Y2H1 464 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 REXO2Q9Y3B8 237 aaKnown RBP8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 CARMIL3Q8ND23 1372 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 ADGRL1O94910 1474 aa8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 TARBP1Q13395 1621 aaKnown RBP8.15□□□□□ -1.11
LIMCH1-207ENST00000508466 SHOX2O60902 331 aaPredicted RBP8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 ANP32DO95626 131 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 PDHA1P08559 390 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 IDEP14735 1019 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 CARSP49589 748 aaKnown RBP8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 KLK7P49862 253 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 GRIK3Q13003 919 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 TRDNQ13061 729 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 CRYMQ14894 314 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 NR1I3Q14994 352 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 NBPF20Q3BBV1 942 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 CAPRIN2Q6IMN6 1127 aaKnown RBP8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 KIAA1328Q86T90 577 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 TXNDC2Q86VQ3 553 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 SAAL1Q96ER3 474 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 ARHGEF10LQ9HCE6 1279 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 RPS6KL1Q9Y6S9 549 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 PNPLA6Q8IY17 1366 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 NPHP4O75161 1426 aaPredicted RBP8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 KLHL33A6NCF5 533 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 DCDC2CA8MYV0 355 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 CMA1P23946 247 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 AARSP49588 968 aaKnown RBP eCLIP8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 C11orf91Q3C1V1 193 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 NAA16Q6N069 864 aaPredicted RBP8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 B4GALNT4Q76KP1 1039 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 DHX32Q7L7V1 743 aaKnown RBP8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 MYCBPAPQ8TBZ2 947 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 KCNG4Q8TDN1 519 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 VCPKMTQ9H867 229 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 KIF24Q5T7B8 1368 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 MAP3K19Q56UN5 1328 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 FSBPO95073 299 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 SMTNP53814 917 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 TIMM10P62072 90 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 BEND3Q5T5X7 828 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 NFRKBQ6P4R8 1299 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 BZW1Q7L1Q6 419 aaKnown RBP8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 XAGE2Q96GT9 111 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 DBNDD2Q9BQY9 259 aa8.14□□□□□ -1.11
LIMCH1-207ENST00000508466 MLXIPQ9HAP2 919 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms