RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 MAGEB6P1A0A0J9YX57 407 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 ADD2P35612 726 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 USP5P45974 858 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 HMGCS2P54868 508 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 PRMT2P55345 433 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 SHROOM1Q2M3G4 852 aaPredicted RBP11□□□□□ -0.65
PDLIM5-209ENST00000506632 TREML2Q5T2D2 321 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 TATDN1Q6P1N9 297 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 CRACR2BQ8N4Y2 399 aaPredicted RBP11□□□□□ -0.65
PDLIM5-209ENST00000506632 ZNF333Q96JL9 665 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 TRIM47Q96LD4 638 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 ZBTB21Q9ULJ3 1066 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 PCDHB15Q9Y5E8 787 aa11□□□□□ -0.65
PDLIM5-209ENST00000506632 GDF11O95390 407 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 PSMC4P43686 418 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 PLCD1P51178 756 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 GABPAQ06546 454 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 TTC6Q86TZ1 520 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 LCORLQ8N3X6 602 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 CRNKL1Q9BZJ0 848 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 AS3MTQ9HBK9 375 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 SRRDQ9UH36 339 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 SERPINB13Q9UIV8 391 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 MGAMO43451 1857 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 MYH7P12883 1935 aa10.99□□□□□ -0.65
PDLIM5-209ENST00000506632 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 OSBPP22059 807 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 SHMT1P34896 483 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 BACE1P56817 501 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 MTMR2Q13614 643 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 UBE3CQ15386 1083 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 SLC4A8Q2Y0W8 1093 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 SLC9C1Q4G0N8 1177 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 TRIM34Q9BYJ4 488 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 BCL11AQ9H165 835 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 DCP1AQ9NPI6 582 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 ECHDC1Q9NTX5 307 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 PNMA3Q9UL41 463 aa10.98□□□□□ -0.65
PDLIM5-209ENST00000506632 C19orf81C9J6K1 198 aa10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 USP17L10C9JJH3 530 aa10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 GH2P01242 217 aa10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 CHGBP05060 677 aa10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 HOXA7P31268 230 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 FCGRTP55899 365 aa10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 EVX2Q03828 476 aa10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 FAM110CQ1W6H9 321 aa10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 SMCR8Q8TEV9 937 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 SDR42E1Q8WUS8 393 aa10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 ASCC2Q9H1I8 757 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 ARMT1Q9H993 441 aa10.97□□□□□ -0.65
PDLIM5-209ENST00000506632 TNRC18O15417 2968 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 MYPNQ86TC9 1320 aa10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 MBD4O95243 580 aa10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 FMNL1O95466 1100 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 HOXD10P28358 340 aa10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 GCLCP48506 637 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 CERKLQ49MI3 558 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 NBPF11Q86T75 865 aa10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 ANKRD13CQ8N6S4 541 aa10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 C12orf42Q96LP6 360 aa10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 CRBNQ96SW2 442 aa10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 MCM9Q9NXL9 1143 aa10.96□□□□□ -0.65
PDLIM5-209ENST00000506632 PRKAB2O43741 272 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 ECM2O94769 699 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 POLR3DP05423 398 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 CYP2D6P10635 497 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 GUCY1A2P33402 732 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 PRKCZQ05513 592 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 ZSCAN25Q6NSZ9 544 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 KBTBD3Q8NAB2 608 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 SH3TC2Q8TF17 1288 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 PUS7LQ9H0K6 701 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 EMILIN3Q9NT22 766 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 ATP8A2Q9NTI2 1148 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 TMOD4Q9NZQ9 345 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 MORF4L1Q9UBU8 362 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 GABRQQ9UN88 632 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 DOCK3Q8IZD9 2030 aa10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 BAZ2AQ9UIF9 1905 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-209ENST00000506632 TTC41PQ6P2S7 1318 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 SALL3Q9BXA9 1300 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 GRK4P32298 578 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 IRF5Q13568 498 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 ABCB5Q2M3G0 1257 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 TSHZ3Q63HK5 1081 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L2Q6R6M4 530 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 PI4K2BQ8TCG2 481 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 RAET1EQ8TD07 263 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 GPATCH3Q96I76 525 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 YTHDC1Q96MU7 727 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 KIAA1683Q9H0B3 1180 aa10.94□□□□□ -0.66
PDLIM5-209ENST00000506632 SMIM22K7EJ46 135 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 TNPO2O14787 897 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 EN2P19622 333 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 FLT3LGP49771 235 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 HERVK_113P62684 666 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 IRX3P78415 501 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms