RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 DISP2A7MBM2 1401 aa18.02■□□□□ 0.48
SCLT1-208ENST00000506368 ADAMTS7Q9UKP4 1686 aa18.02■□□□□ 0.48
SCLT1-208ENST00000506368 BRWD3Q6RI45 1802 aa18.02■□□□□ 0.47
SCLT1-208ENST00000506368 ZMYM6O95789 1325 aa18.02■□□□□ 0.47
SCLT1-208ENST00000506368 SOWAHDA6NJG2 315 aa18.02■□□□□ 0.47
SCLT1-208ENST00000506368 EBAG9O00559 213 aa18.02■□□□□ 0.47
SCLT1-208ENST00000506368 PRC1O43663 620 aa18.02■□□□□ 0.47
SCLT1-208ENST00000506368 PBX1P40424 430 aa18.02■□□□□ 0.47
SCLT1-208ENST00000506368 PDE4BQ07343 736 aa18.02■□□□□ 0.47
SCLT1-208ENST00000506368 C1orf141Q5JVX7 400 aa18.02■□□□□ 0.47
SCLT1-208ENST00000506368 FOXP4Q8IVH2 680 aaPredicted RBP18.02■□□□□ 0.47
SCLT1-208ENST00000506368 IGSF22Q8N9C0 903 aa18.02■□□□□ 0.47
SCLT1-208ENST00000506368 MYO6Q9UM54 1294 aa18.02■□□□□ 0.47
SCLT1-208ENST00000506368 LRRIQ3A6PVS8 624 aaPredicted RBP18.01■□□□□ 0.47
SCLT1-208ENST00000506368 CLGNO14967 610 aa18.01■□□□□ 0.47
SCLT1-208ENST00000506368 SYF2O95926 243 aaKnown RBP18.01■□□□□ 0.47
SCLT1-208ENST00000506368 RHOXF2BP0C7M4 288 aa18.01■□□□□ 0.47
SCLT1-208ENST00000506368 BMP6P22004 513 aa18.01■□□□□ 0.47
SCLT1-208ENST00000506368 BARGINQ6ZT62 677 aa18.01■□□□□ 0.47
SCLT1-208ENST00000506368 SLC35F6Q8N357 371 aa18.01■□□□□ 0.47
SCLT1-208ENST00000506368 RAPGEF4Q8WZA2 1011 aa18.01■□□□□ 0.47
SCLT1-208ENST00000506368 RHOXF2Q9BQY4 288 aa18.01■□□□□ 0.47
SCLT1-208ENST00000506368 USP14P54578 494 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 CKAP4Q07065 602 aaKnown RBP18■□□□□ 0.47
SCLT1-208ENST00000506368 TRIM29Q14134 588 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 FAM182BQ5T319 152 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 SPATA1Q5VX52 437 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 RALYLQ86SE5 291 aaKnown RBP18■□□□□ 0.47
SCLT1-208ENST00000506368 SEPT12Q8IYM1 358 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 KLHDC4Q8TBB5 520 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 COG1Q8WTW3 980 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 ALG1Q9BT22 464 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 A1CFQ9NQ94 594 aaKnown RBP18■□□□□ 0.47
SCLT1-208ENST00000506368 THRAP3Q9Y2W1 955 aaKnown RBP18■□□□□ 0.47
SCLT1-208ENST00000506368 THSD7AQ9UPZ6 1657 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 CDHR2Q9BYE9 1310 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 SETQ01105 290 aaPredicted RBP18■□□□□ 0.47
SCLT1-208ENST00000506368 AMPD2Q01433 879 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 MICALL1Q8N3F8 863 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 SPATA20Q8TB22 786 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 HPCAL4Q9UM19 191 aa18■□□□□ 0.47
SCLT1-208ENST00000506368 SHANK3Q9BYB0 1731 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 GOLIM4O00461 696 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 NBPF14Q5TI25 921 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 KRT40Q6A162 431 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 FAM76AQ8TAV0 307 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 IRX2Q9BZI1 471 aaPredicted RBP17.99■□□□□ 0.47
SCLT1-208ENST00000506368 PARP4Q9UKK3 1724 aaKnown RBP17.99■□□□□ 0.47
SCLT1-208ENST00000506368 STK36Q9NRP7 1315 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 LOC102724159A0A0B4J2E5 919 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 SHTN1A0MZ66 631 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 CDC27P30260 824 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 RBL2Q08999 1139 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 TRDNQ13061 729 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 PPFIA1Q13136 1202 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 MTF1Q14872 753 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 PWP2Q15269 919 aaKnown RBP17.99■□□□□ 0.47
SCLT1-208ENST00000506368 CYP26C1Q6V0L0 522 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 EHBP1Q8NDI1 1231 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 ANKRD20A12PQ8NF67 263 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 SUGCTQ9HAC7 445 aa17.99■□□□□ 0.47
SCLT1-208ENST00000506368 TATP17735 454 aaPredicted RBP17.98■□□□□ 0.47
SCLT1-208ENST00000506368 ATP6V1AP38606 617 aa17.98■□□□□ 0.47
SCLT1-208ENST00000506368 PIP4K2AP48426 406 aaPredicted RBP17.98■□□□□ 0.47
SCLT1-208ENST00000506368 FMR1Q06787 632 aaKnown RBP eCLIP17.98■□□□□ 0.473e-7■■■■□ 25.7
SCLT1-208ENST00000506368 STIM1Q13586 685 aa17.98■□□□□ 0.47
SCLT1-208ENST00000506368 PDIA6Q15084 440 aa17.98■□□□□ 0.47
SCLT1-208ENST00000506368 EPHA10Q5JZY3 1008 aa17.98■□□□□ 0.47
SCLT1-208ENST00000506368 IQCEQ6IPM2 695 aa17.98■□□□□ 0.47
SCLT1-208ENST00000506368 ZNF662Q6ZS27 426 aa17.98■□□□□ 0.47
SCLT1-208ENST00000506368 WASF1Q92558 559 aa17.98■□□□□ 0.47
SCLT1-208ENST00000506368 CRACR2AQ9BSW2 395 aa17.98■□□□□ 0.47
SCLT1-208ENST00000506368 TEX13AQ9BXU3 409 aaPredicted RBP17.98■□□□□ 0.47
SCLT1-208ENST00000506368 ADD3Q9UEY8 706 aaKnown RBP17.98■□□□□ 0.47
SCLT1-208ENST00000506368 ABCC12Q96J65 1359 aa17.98■□□□□ 0.47
SCLT1-208ENST00000506368 ONECUT3O60422 494 aaPredicted RBP17.97■□□□□ 0.47
SCLT1-208ENST00000506368 PSEN1P49768 467 aa17.97■□□□□ 0.47
SCLT1-208ENST00000506368 APTXQ7Z2E3 356 aaKnown RBP17.97■□□□□ 0.47
SCLT1-208ENST00000506368 PSMD14O00487 310 aa17.97■□□□□ 0.47
SCLT1-208ENST00000506368 CCDC172P0C7W6 258 aa17.97■□□□□ 0.47
SCLT1-208ENST00000506368 MAP2K2P36507 400 aa17.97■□□□□ 0.47
SCLT1-208ENST00000506368 PAXIP1Q6ZW49 1069 aaPredicted RBP17.97■□□□□ 0.47
SCLT1-208ENST00000506368 CHST3Q7LGC8 479 aa17.97■□□□□ 0.47
SCLT1-208ENST00000506368 TRAPPC11Q7Z392 1133 aa17.97■□□□□ 0.47
SCLT1-208ENST00000506368 CEP131Q9UPN4 1083 aa17.97■□□□□ 0.47
SCLT1-208ENST00000506368 PHACTR2O75167 634 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 PTPREP23469 700 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 SPAG1Q07617 926 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 DDB1Q16531 1140 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 CDKAL1Q5VV42 579 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 CCDC70Q6NSX1 233 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 B4GALNT4Q76KP1 1039 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 STAG1Q8WVM7 1258 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 CXorf56Q9H5V9 222 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 HAUS4Q9H6D7 363 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 TOMM22Q9NS69 142 aa17.96■□□□□ 0.47
SCLT1-208ENST00000506368 AFDNP55196 1824 aaKnown RBP17.96■□□□□ 0.47
SCLT1-208ENST00000506368 GOLGA8KD6RF30 607 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 EXOC5O00471 708 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 IL15P40933 162 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms