RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MCTP1Q6DN14 999 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 LETMD1Q6P1Q0 360 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 GOLM1Q8NBJ4 401 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 GATAD2BQ8WXI9 593 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 TMEM87BQ96K49 555 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 FBXL18Q96ME1 805 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 PRDM5Q9NQX1 630 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 GTF2IRD1Q9UHL9 959 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 TPX2Q9ULW0 747 aaKnown RBP6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 SLC5A6Q9Y289 635 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 POLR3KQ9Y2Y1 108 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 UPK3BL1B0FP48 263 aa6.02□□□□□ -1.45
HMGB1P29-201ENST00000505659 UPK3BL2E5RIL1 263 aa6.02□□□□□ -1.45
HMGB1P29-201ENST00000505659 AOC3Q16853 763 aa6.02□□□□□ -1.45
HMGB1P29-201ENST00000505659 CDH24Q86UP0 819 aa6.02□□□□□ -1.45
HMGB1P29-201ENST00000505659 CCDC84Q86UT8 332 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P29-201ENST00000505659 MRPL41Q8IXM3 137 aaKnown RBP6.02□□□□□ -1.45
HMGB1P29-201ENST00000505659 TNKS2Q9H2K2 1166 aa6.02□□□□□ -1.45
HMGB1P29-201ENST00000505659 MKNK2Q9HBH9 465 aa6.02□□□□□ -1.45
HMGB1P29-201ENST00000505659 GGT7Q9UJ14 662 aa6.02□□□□□ -1.45
HMGB1P29-201ENST00000505659 TACC3Q9Y6A5 838 aa6.02□□□□□ -1.45
HMGB1P29-201ENST00000505659 IGF2BP3O00425 579 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P29-201ENST00000505659 BPNT1O95861 308 aa6.01□□□□□ -1.45
HMGB1P29-201ENST00000505659 PLCG1P19174 1290 aa6.01□□□□□ -1.45
HMGB1P29-201ENST00000505659 FBXL19Q6PCT2 694 aa6.01□□□□□ -1.45
HMGB1P29-201ENST00000505659 MFSD2AQ8NA29 543 aa6.01□□□□□ -1.45
HMGB1P29-201ENST00000505659 HRASLS5Q96KN8 279 aa6.01□□□□□ -1.45
HMGB1P29-201ENST00000505659 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
HMGB1P29-201ENST00000505659 TMEM265A0A087WTH1 108 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 GNAT3A8MTJ3 354 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 DNAJA2O60884 412 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 CBX7O95931 251 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 TAL1P17542 331 aaPredicted RBP6□□□□□ -1.45
HMGB1P29-201ENST00000505659 CRKP46108 304 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 PRKCQQ04759 706 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 PDE4BQ07343 736 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 PWP1Q13610 501 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 PLCL1Q15111 1095 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 FAM196AQ6ZSG2 479 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 CBLL1Q75N03 491 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 MCATQ8IVS2 390 aaKnown RBP6□□□□□ -1.45
HMGB1P29-201ENST00000505659 STK11IPQ8N1F8 1099 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 MISP3Q96FF7 219 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 ADAMTS1Q9UHI8 967 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 ADAMTS6Q9UKP5 1117 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 VAV3Q9UKW4 847 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 MAPK8IP1Q9UQF2 711 aa6□□□□□ -1.45
HMGB1P29-201ENST00000505659 COL17A1Q9UMD9 1497 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 HTR3BO95264 441 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 ITGAEP38570 1179 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 EIF4A3P38919 411 aaKnown RBP5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 SFRP5Q5T4F7 317 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 CDKAL1Q5VV42 579 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 SLC6A19Q695T7 634 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 HS2ST1Q7LGA3 356 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 REC114Q7Z4M0 266 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 TMEM87AQ8NBN3 555 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 FAM13CQ8NE31 585 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 DNAJB8Q8NHS0 232 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 BACH2Q9BYV9 841 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 PRDM7Q9NQW5 492 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 REV1Q9UBZ9 1251 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 KLHL3Q9UH77 587 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 ADAM30Q9UKF2 790 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 PITPNM2Q9BZ72 1349 aa5.99□□□□□ -1.45
HMGB1P29-201ENST00000505659 CHURC1-FNTBB4DL54 471 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 ZNF865P0CJ78 1059 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 FUT4P22083 530 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 MPP2Q14168 576 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 ZNF792Q3KQV3 632 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 MFSD4AQ8N468 514 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 AGBL5Q8NDL9 886 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 PPP1R13LQ8WUF5 828 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 ZNF296Q8WUU4 475 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 HSPA12BQ96MM6 686 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 KCNQ5Q9NR82 932 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 MBNL3Q9NUK0 354 aaKnown RBP5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 UBP1Q9NZI7 540 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 CAPN6Q9Y6Q1 641 aa5.98□□□□□ -1.45
HMGB1P29-201ENST00000505659 RBM47A0AV96 593 aaKnown RBP5.97□□□□□ -1.45
HMGB1P29-201ENST00000505659 FAM155AB1AL88 458 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P29-201ENST00000505659 GREM1O60565 184 aa5.97□□□□□ -1.45
HMGB1P29-201ENST00000505659 IKZF1Q13422 519 aa5.97□□□□□ -1.45
HMGB1P29-201ENST00000505659 TMEM201Q5SNT2 666 aa5.97□□□□□ -1.45
HMGB1P29-201ENST00000505659 BRMS1Q9HCU9 246 aa5.97□□□□□ -1.45
HMGB1P29-201ENST00000505659 ATP13A1Q9HD20 1204 aa5.97□□□□□ -1.45
HMGB1P29-201ENST00000505659 SEMA3GQ9NS98 782 aa5.97□□□□□ -1.45
HMGB1P29-201ENST00000505659 SUPT16HQ9Y5B9 1047 aaKnown RBP5.97□□□□□ -1.45
HMGB1P29-201ENST00000505659 PRR36Q9H6K5 1346 aa5.97□□□□□ -1.45
HMGB1P29-201ENST00000505659 WASH4PA8MWX3 477 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 H3BS24 57 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 RECKO95980 971 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 RNASE1P07998 156 aaKnown RBP5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 CLCN7P51798 805 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 FANCCQ00597 558 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 TNK2Q07912 1038 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 ZNF394Q53GI3 561 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 ANGEL2Q5VTE6 544 aaKnown RBP5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 C22orf34Q6ZV56 151 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 CYB5D2Q8WUJ1 264 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms