RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 UNC5AQ6ZN44 842 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 MORC1Q86VD1 984 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 TPH2Q8IWU9 490 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 ITPKCQ96DU7 683 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 ACSBG1Q96GR2 724 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 LRGUKQ96M69 825 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 NSUN5Q96P11 429 aaKnown RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 INSM2Q96T92 566 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 EMILIN2Q9BXX0 1053 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 ZNF576Q9H609 170 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 ZFAND3Q9H8U3 227 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 TIMMDC1Q9NPL8 285 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 CASS4Q9NQ75 786 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 KCNH4Q9UQ05 1017 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 POLR3KQ9Y2Y1 108 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 PDE2AO00408 941 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 TCERG1O14776 1098 aaKnown RBP4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 SIAH2O43255 324 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 PRODHO43272 600 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 SLC26A4O43511 780 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 RGS20O76081 388 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 HTR3BO95264 441 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 NAT2P11245 290 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 ATP4AP20648 1035 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 MSX1P28360 303 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 GPC1P35052 558 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 FLT3P36888 993 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 ABCB5Q2M3G0 1257 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 MINDY4Q4G0A6 757 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 RASIP1Q5U651 963 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 SYDE2Q5VT97 1194 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 YOD1Q5VVQ6 348 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 IQSEC1Q6DN90 963 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 C1orf228Q6PIY5 440 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 Q6ZVU0 165 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 SCUBE1Q8IWY4 988 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 TEX19Q8NA77 164 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 ANKLE1Q8NAG6 615 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 OR2W6PQ8NHA6 318 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 PI4K2BQ8TCG2 481 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 MRGPRX2Q96LB1 330 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 CNTNAP3BQ96NU0 1288 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 HHIPQ96QV1 700 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 AARSD1Q9BTE6 412 aaKnown RBP4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 MRPL4Q9BYD3 311 aaKnown RBP4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 CNTNAP3Q9BZ76 1288 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 AS3MTQ9HBK9 375 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 GPAMQ9HCL2 828 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 INTS7Q9NVH2 962 aaKnown RBP4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 SUCOQ9UBS9 1254 aaKnown RBP4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 KLHL3Q9UH77 587 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 SPEF1Q9Y4P9 236 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 TNPO3Q9Y5L0 923 aaKnown RBP4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 RPS6KL1Q9Y6S9 549 aa4.54□□□□□ -1.68
HMGB1P22-201ENST00000505315 LTBP3Q9NS15 1303 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 FAM177BA6PVY3 158 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 JMJD7P0C870 316 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 TRIM27P14373 513 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 LIG1P18858 919 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 NFKB1P19838 968 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 BMP6P22004 513 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 ARNTP27540 789 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 RNF144AP50876 292 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 SCNN1BP51168 640 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 SUMO1P63165 101 aaKnown RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 PLAURQ03405 335 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 CHAF1AQ13111 956 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 MAPRE1Q15691 268 aaKnown RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 CFAP100Q494V2 611 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 ALFQ53S48 1182 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 COL13A1Q5TAT6 717 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 MAP1SQ66K74 1059 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 ZNF280DQ6N043 979 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 CXorf57Q6NSI4 855 aaKnown RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 NSMFQ6X4W1 530 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 UBE2R2Q712K3 238 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 PCGF5Q86SE9 256 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 PNMA8AQ86V59 439 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 PJA1Q8NG27 643 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 KISS1RQ969F8 398 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 CLIP3Q96DZ5 547 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 TNIP3Q96KP6 325 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 HS3ST6Q96QI5 342 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 CDC5LQ99459 802 aaKnown RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 ELAC2Q9BQ52 826 aaKnown RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 RHOBTB2Q9BYZ6 727 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 ZCCHC2Q9C0B9 1178 aaKnown RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 RUBCNLQ9H714 662 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 IFT22Q9H7X7 185 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 SAP30BPQ9UHR5 308 aaKnown RBP4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 PCDHA4Q9UN74 947 aa4.53□□□□□ -1.68
HMGB1P22-201ENST00000505315 TNKSO95271 1327 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 FRMPD2Q68DX3 1309 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 A0A1W2PQU0 124 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 DYTNA2CJ06 578 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 NEMP1O14524 444 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 GABRDO14764 452 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 RFPL1O75677 317 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 DNAJC8O75937 253 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 FBXO21O94952 628 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms