RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 RASA1P20936 1047 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 SLC4A8Q2Y0W8 1093 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 MIGA2Q7L4E1 593 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 SAPCD2Q86UD0 394 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 FOXP4Q8IVH2 680 aaPredicted RBP5.9□□□□□ -1.46
LMNB1-208ENST00000504788 RUFY2Q8WXA3 655 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 PHF12Q96QT6 1004 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 CREBZFQ9NS37 354 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 HERC5Q9UII4 1024 aaKnown RBP5.9□□□□□ -1.46
LMNB1-208ENST00000504788 SERPINB13Q9UIV8 391 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 TAOK2Q9UL54 1235 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 RBM8AQ9Y5S9 174 aaKnown RBP5.9□□□□□ -1.46
LMNB1-208ENST00000504788 NEDD4P46934 1319 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 BRCA2P51587 3418 aa5.9□□□□□ -1.46
LMNB1-208ENST00000504788 FAM155AB1AL88 458 aaPredicted RBP5.9□□□□□ -1.47
LMNB1-208ENST00000504788 SLC27A2O14975 620 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 INPP5BP32019 993 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 GJA5P36382 358 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 CAP2P40123 477 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 USP5P45974 858 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 TNNI2P48788 182 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 CDK8P49336 464 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 ANTXR2P58335 489 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 CTDSPL2Q05D32 466 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 ADCK5Q3MIX3 580 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 NOL9Q5SY16 702 aaKnown RBP5.9□□□□□ -1.47
LMNB1-208ENST00000504788 RCSD1Q6JBY9 416 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 STAG1Q8WVM7 1258 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 NAPBQ9H115 298 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 IL17RBQ9NRM6 502 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 TMOD2Q9NZR1 351 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.9□□□□□ -1.47
LMNB1-208ENST00000504788 SNCAIPQ9Y6H5 919 aa5.9□□□□□ -1.47
LMNB1-208ENST00000504788 ORC4O43929 436 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 MFAP1P55081 439 aaKnown RBP5.89□□□□□ -1.47
LMNB1-208ENST00000504788 HAND2P61296 217 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 FKBP1BP68106 108 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 MOGSQ13724 837 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 CREB3L3Q68CJ9 461 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 TTC6Q86TZ1 520 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 MB21D2Q8IYB1 491 aaPredicted RBP5.89□□□□□ -1.47
LMNB1-208ENST00000504788 ZKSCAN4Q969J2 545 aaPredicted RBP5.89□□□□□ -1.47
LMNB1-208ENST00000504788 CLMNQ96JQ2 1002 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 NOL10Q9BSC4 688 aaKnown RBP5.89□□□□□ -1.47
LMNB1-208ENST00000504788 ANO2Q9NQ90 1003 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 SNX14Q9Y5W7 946 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 TLL2Q9Y6L7 1015 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 A0A0G2JMZ2 1700 aa5.89□□□□□ -1.47
LMNB1-208ENST00000504788 A0A1W2PRG0 241 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 UNCXA6NJT0 531 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 MINDY4BA8MYZ0 360 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 E7EWF7 191 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 PRDM1O75626 825 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 CELF2O95319 508 aaKnown RBP5.88□□□□□ -1.47
LMNB1-208ENST00000504788 AKR1B1P15121 316 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 TDO2P48775 406 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 RBM25P49756 843 aaKnown RBP5.88□□□□□ -1.47
LMNB1-208ENST00000504788 VGLL4Q14135 290 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 SUPT20HL1Q3ZLR7 823 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 AKNAD1Q5T1N1 836 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 HHIPL1Q96JK4 782 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 AGXT2Q9BYV1 514 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 GBA2Q9HCG7 927 aaPredicted RBP5.88□□□□□ -1.47
LMNB1-208ENST00000504788 SWAP70Q9UH65 585 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 SPDYE5A6NIY4 337 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 RASSF10A6NK89 507 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 UBE2Q2LH0YL09 131 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 ATMINO43313 823 aaPredicted RBP5.88□□□□□ -1.47
LMNB1-208ENST00000504788 CTNND1O60716 968 aaKnown RBP5.88□□□□□ -1.47
LMNB1-208ENST00000504788 REC8O95072 547 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 APPP05067 770 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 POLR3DP05423 398 aaPredicted RBP5.88□□□□□ -1.47
LMNB1-208ENST00000504788 PCP11498 1178 aaKnown RBP5.88□□□□□ -1.47
LMNB1-208ENST00000504788 APLP1P51693 650 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 C1QTNF8P60827 252 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 EXOSC10Q01780 885 aaKnown RBP5.88□□□□□ -1.47
LMNB1-208ENST00000504788 SEC23AQ15436 765 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 KIAA1755Q5JYT7 1200 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 POTEEQ6S8J3 1075 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 CYB5R4Q7L1T6 521 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 CCDC84Q86UT8 332 aaPredicted RBP5.88□□□□□ -1.47
LMNB1-208ENST00000504788 CLEC10AQ8IUN9 316 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 FBXL16Q8N461 479 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 NEDD1Q8NHV4 660 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 MS4A4AQ96JQ5 239 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 WRNIP1Q96S55 665 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 ZNF341Q9BYN7 854 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 NACAP1Q9BZK3 213 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.88□□□□□ -1.47
LMNB1-208ENST00000504788 TCP11L1Q9NUJ3 509 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 ZSWIM5Q9P217 1185 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 ZBTB21Q9ULJ3 1066 aa5.88□□□□□ -1.47
LMNB1-208ENST00000504788 SMCHD1A6NHR9 2005 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 TMEM88BA6NKF7 163 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 ZNF213O14771 459 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 PPP1R12BO60237 982 aaPredicted RBP5.87□□□□□ -1.47
LMNB1-208ENST00000504788 NMT2O60551 498 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 GDF11O95390 407 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 HLA-DOAP06340 250 aa5.87□□□□□ -1.47
LMNB1-208ENST00000504788 PTPRAP18433 802 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms