RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 RGL3Q3MIN7 710 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 BCAS4Q8TDM0 211 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 PFDN4Q9NQP4 134 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 WDR7Q9Y4E6 1490 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 RPAP1Q9BWH6 1393 aaPredicted RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 PNMA6AP0CW24 399 aaPredicted RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 PDE1BQ01064 536 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CAV1Q03135 178 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CFAP36Q96G28 342 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CCDC42Q96M95 316 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ANTXR1Q9H6X2 564 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 FRMD4BQ9Y2L6 1034 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 E9PCH4 1651 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 E9PMD0 336 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 KLC3Q6P597 504 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 NLRP9Q7RTR0 991 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ZNF513Q8N8E2 541 aaPredicted RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 FSIP1Q8NA03 581 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CCDC63Q8NA47 563 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 MAP3K7O43318 606 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 NOP2P46087 812 aaKnown RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 RASGRF1Q13972 1273 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CDC37Q16543 378 aaPredicted RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 RILPL1Q5EBL4 403 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 SPDYCQ5MJ68 293 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CCDC25Q86WR0 208 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 DDX23Q9BUQ8 820 aaKnown RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 TEX13AQ9BXU3 409 aaPredicted RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 KCNG1Q9UIX4 513 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 USP32Q8NFA0 1604 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ADCY10Q96PN6 1610 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ZEB2O60315 1214 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 ATAD3BQ5T9A4 648 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 PPP1R42Q7Z4L9 355 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 CACTINQ8WUQ7 758 aaKnown RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 MAK16Q9BXY0 300 aaKnown RBP6.74□□□□□ -1.33
LINC02397-201ENST00000504409 PANK2Q9BZ23 570 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 LMBRD1Q9NUN5 540 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 WWC3Q9ULE0 1092 aa6.74□□□□□ -1.33
LINC02397-201ENST00000504409 IPO5O00410 1097 aaKnown RBP6.73□□□□□ -1.33
LINC02397-201ENST00000504409 BIRC5O15392 142 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 PDXDC1Q6P996 788 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 ELOA2Q8IYF1 753 aaPredicted RBP6.73□□□□□ -1.33
LINC02397-201ENST00000504409 ATP2A3Q93084 1043 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 RSPH3Q86UC2 560 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 PIK3R4Q99570 1358 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 NEURL4Q96JN8 1562 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 ANKRD62A6NC57 917 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 ILF2Q12905 390 aaKnown RBP6.73□□□□□ -1.33
LINC02397-201ENST00000504409 ADKP55263 362 aaKnown RBP6.73□□□□□ -1.33
LINC02397-201ENST00000504409 HDAC4P56524 1084 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 DAB2IPQ5VWQ8 1189 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 TRPC4APQ8TEL6 797 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 NOB1Q9ULX3 412 aaKnown RBP6.73□□□□□ -1.33
LINC02397-201ENST00000504409 RTL9Q8NET4 1388 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 GJB2P29033 226 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 ATL2Q8NHH9 583 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 GTF3C6Q969F1 213 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 SERPINI1Q99574 410 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 RIPOR2Q9Y4F9 1068 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 CCDC162PA2VCL2 907 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 CALML3P27482 149 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 YIPF3Q9GZM5 350 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 MAFGO15525 162 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 GRM1Q13255 1194 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 TBC1D23Q9NUY8 699 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 HOXB6P17509 224 aaKnown RBP6.73□□□□□ -1.33
LINC02397-201ENST00000504409 MMP14P50281 582 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 ADCY2Q08462 1091 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 RRS1Q15050 365 aaKnown RBP6.73□□□□□ -1.33
LINC02397-201ENST00000504409 SNRNP27Q8WVK2 155 aaKnown RBP6.73□□□□□ -1.33
LINC02397-201ENST00000504409 FBXW7Q969H0 707 aa6.73□□□□□ -1.33
LINC02397-201ENST00000504409 HNRNPRO43390 633 aaKnown RBP6.72□□□□□ -1.33
LINC02397-201ENST00000504409 KRT39Q6A163 491 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 CCDC82Q8N4S0 544 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 HAUS2Q9NVX0 235 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 ORC3Q9UBD5 711 aaPredicted RBP6.72□□□□□ -1.33
LINC02397-201ENST00000504409 TBC1D12O60347 775 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 CPP00450 1065 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 PLCB3Q01970 1234 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 CCDC144BQ3MJ40 725 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 RASIP1Q5U651 963 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 PPP4R3AQ6IN85 833 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 KLHL23Q8NBE8 558 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 SECISBP2LQ93073 1101 aaKnown RBP6.72□□□□□ -1.33
LINC02397-201ENST00000504409 EHMT1Q9H9B1 1298 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 SNUPNO95149 360 aaKnown RBP6.72□□□□□ -1.33
LINC02397-201ENST00000504409 ZBTB16Q05516 673 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 C17orf50Q8WW18 174 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 TRIM15Q9C019 465 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 RRP7AQ9Y3A4 280 aaKnown RBP6.72□□□□□ -1.33
LINC02397-201ENST00000504409 EID1Q9Y6B2 187 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 LRIG3Q6UXM1 1119 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 CATSPER2Q96P56 530 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 C1orf141Q5JVX7 400 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 LARP1Q6PKG0 1096 aaKnown RBP6.72□□□□□ -1.33
LINC02397-201ENST00000504409 FERMT2Q96AC1 680 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 CUEDC2Q9H467 287 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 TCP11L1Q9NUJ3 509 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms