RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 IGSF3O75054 1194 aa17.33■□□□□ 0.36
POLR2J3-207ENST00000503564 ZAP70P43403 619 aa17.33■□□□□ 0.36
POLR2J3-207ENST00000503564 TRIM32Q13049 653 aa17.33■□□□□ 0.36
POLR2J3-207ENST00000503564 PAWRQ96IZ0 340 aaKnown RBP17.33■□□□□ 0.36
POLR2J3-207ENST00000503564 C1orf115Q9H7X2 142 aa17.33■□□□□ 0.36
POLR2J3-207ENST00000503564 TXNRD2Q9NNW7 524 aa17.33■□□□□ 0.36
POLR2J3-207ENST00000503564 TLR7Q9NYK1 1049 aaKnown RBP17.33■□□□□ 0.36
POLR2J3-207ENST00000503564 DBNLQ9UJU6 430 aaKnown RBP17.33■□□□□ 0.36
POLR2J3-207ENST00000503564 ZBTB21Q9ULJ3 1066 aa17.33■□□□□ 0.36
POLR2J3-207ENST00000503564 NOP58Q9Y2X3 529 aaKnown RBP17.33■□□□□ 0.36
POLR2J3-207ENST00000503564 EVI5O60447 810 aa17.32■□□□□ 0.36
POLR2J3-207ENST00000503564 PEX10O60683 326 aa17.32■□□□□ 0.36
POLR2J3-207ENST00000503564 SURF6O75683 361 aaKnown RBP17.32■□□□□ 0.36
POLR2J3-207ENST00000503564 GDF11O95390 407 aa17.32■□□□□ 0.36
POLR2J3-207ENST00000503564 IRX3P78415 501 aaPredicted RBP17.32■□□□□ 0.36
POLR2J3-207ENST00000503564 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
POLR2J3-207ENST00000503564 FOXP4Q8IVH2 680 aaPredicted RBP17.32■□□□□ 0.36
POLR2J3-207ENST00000503564 TRIB2Q92519 343 aa17.32■□□□□ 0.36
POLR2J3-207ENST00000503564 GINM1Q9NU53 330 aa17.32■□□□□ 0.36
POLR2J3-207ENST00000503564 PALD1Q9ULE6 856 aa17.32■□□□□ 0.36
POLR2J3-207ENST00000503564 FRMPD3Q5JV73 1810 aa17.31■□□□□ 0.36
POLR2J3-207ENST00000503564 RPTORQ8N122 1335 aa17.31■□□□□ 0.36
POLR2J3-207ENST00000503564 MNX1P50219 401 aaPredicted RBP17.31■□□□□ 0.36
POLR2J3-207ENST00000503564 HERVK_113P62684 666 aa17.31■□□□□ 0.36
POLR2J3-207ENST00000503564 DYNLL1P63167 89 aaKnown RBP17.31■□□□□ 0.36
POLR2J3-207ENST00000503564 CRACR2BQ8N4Y2 399 aaPredicted RBP17.31■□□□□ 0.36
POLR2J3-207ENST00000503564 ANKLE1Q8NAG6 615 aa17.31■□□□□ 0.36
POLR2J3-207ENST00000503564 P2RX7Q99572 595 aaKnown RBP17.31■□□□□ 0.36
POLR2J3-207ENST00000503564 TMOD4Q9NZQ9 345 aa17.31■□□□□ 0.36
POLR2J3-207ENST00000503564 A0A1W2PPC1 479 aa17.3■□□□□ 0.36
POLR2J3-207ENST00000503564 C19orf81C9J6K1 198 aa17.3■□□□□ 0.36
POLR2J3-207ENST00000503564 USP17L10C9JJH3 530 aa17.3■□□□□ 0.36
POLR2J3-207ENST00000503564 MAP3K21Q5TCX8 1036 aa17.3■□□□□ 0.36
POLR2J3-207ENST00000503564 POTEEQ6S8J3 1075 aa17.3■□□□□ 0.36
POLR2J3-207ENST00000503564 NECAB2Q7Z6G3 386 aa17.3■□□□□ 0.36
POLR2J3-207ENST00000503564 EAF2Q96CJ1 260 aaPredicted RBP17.3■□□□□ 0.36
POLR2J3-207ENST00000503564 SAP30BPQ9UHR5 308 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-207ENST00000503564 NAV1Q8NEY1 1877 aa17.3■□□□□ 0.36
POLR2J3-207ENST00000503564 HLA-DOAP06340 250 aa17.29■□□□□ 0.36
POLR2J3-207ENST00000503564 RLBP1P12271 317 aa17.29■□□□□ 0.36
POLR2J3-207ENST00000503564 SOCS4Q8WXH5 440 aa17.29■□□□□ 0.36
POLR2J3-207ENST00000503564 TRIM34Q9BYJ4 488 aa17.29■□□□□ 0.36
POLR2J3-207ENST00000503564 HMX1Q9NP08 348 aaPredicted RBP17.29■□□□□ 0.36
POLR2J3-207ENST00000503564 CYP2B6P20813 491 aa17.28■□□□□ 0.36
POLR2J3-207ENST00000503564 CYP7A1P22680 504 aa17.28■□□□□ 0.36
POLR2J3-207ENST00000503564 GPRC5AQ8NFJ5 357 aa17.28■□□□□ 0.36
POLR2J3-207ENST00000503564 USP6NLQ92738 828 aa17.28■□□□□ 0.36
POLR2J3-207ENST00000503564 CCDC8Q9H0W5 538 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-207ENST00000503564 EMILIN3Q9NT22 766 aa17.28■□□□□ 0.36
POLR2J3-207ENST00000503564 RBPJLQ9UBG7 517 aa17.28■□□□□ 0.36
POLR2J3-207ENST00000503564 OGDHLQ9ULD0 1010 aa17.28■□□□□ 0.36
POLR2J3-207ENST00000503564 SOX1O00570 391 aaPredicted RBP17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 XRCC5P13010 732 aaKnown RBP17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 PRKAR2AP13861 404 aaKnown RBP17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 ERVK-9P63128 1117 aa17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 ERVK-24P63145 666 aa17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 Q3C1V9 767 aa17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 MIGA1Q8NAN2 632 aa17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 C12orf42Q96LP6 360 aa17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 NUDT12Q9BQG2 462 aa17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 PORCNQ9H237 461 aa17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 NDUFB9Q9Y6M9 179 aa17.27■□□□□ 0.36
POLR2J3-207ENST00000503564 IDH1O75874 414 aaKnown RBP17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 GH2P01242 217 aa17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 MAPK4P31152 587 aa17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 TATDN1Q6P1N9 297 aa17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 CEP85Q6P2H3 762 aa17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 USP17L2Q6R6M4 530 aa17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 ITPRIPQ8IWB1 547 aa17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 FTSJ3Q8IY81 847 aaKnown RBP17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 MAGEB6Q8N7X4 407 aa17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 GTF3C2Q8WUA4 911 aaPredicted RBP17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 NBPF3Q9H094 633 aa17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 EHD4Q9H223 541 aa17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 STAP2Q9UGK3 403 aa17.26■□□□□ 0.35
POLR2J3-207ENST00000503564 MORN1Q5T089 497 aa17.25■□□□□ 0.35
POLR2J3-207ENST00000503564 GPR142Q7Z601 462 aa17.25■□□□□ 0.35
POLR2J3-207ENST00000503564 CERS3Q8IU89 383 aa17.25■□□□□ 0.35
POLR2J3-207ENST00000503564 C7orf61Q8IZ16 206 aa17.25■□□□□ 0.35
POLR2J3-207ENST00000503564 GDF15Q99988 308 aa17.25■□□□□ 0.35
POLR2J3-207ENST00000503564 ANTXR1Q9H6X2 564 aa17.25■□□□□ 0.35
POLR2J3-207ENST00000503564 PFASO15067 1338 aa17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 CNMDO75829 334 aa17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 ZKSCAN1P17029 563 aaPredicted RBP17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 USP5P45974 858 aa17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 APBA2Q99767 749 aa17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 PAGR1Q9BTK6 254 aa17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 C11orf49Q9H6J7 331 aa17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 SERPINB13Q9UIV8 391 aa17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 ZMYND8Q9ULU4 1186 aaPredicted RBP17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 LAMA3Q16787 3333 aa17.24■□□□□ 0.35
POLR2J3-207ENST00000503564 BMP8BP34820 402 aa17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 RGS2P41220 211 aa17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 CACNB2Q08289 660 aaPredicted RBP17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 CCL14Q16627 93 aa17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 TMED8Q6PL24 325 aaPredicted RBP17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 PLEKHH3Q7Z736 793 aa17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 TRMT44Q8IYL2 757 aaKnown RBP17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 LRCH3Q96II8 777 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms