RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PCDHB10Q9UN67 800 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 PTCH2Q9Y6C5 1203 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 FAM86C2PA6NEL3 165 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 SHISA8B8ZZ34 492 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 DEAF1O75398 565 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 BCRP11274 1271 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 AMPD1P23109 780 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 CCNFP41002 786 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 YARSP54577 528 aaKnown RBP7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 TCEA2Q15560 299 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 ZBTB37Q5TC79 503 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 SYNPOQ8N3V7 929 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 DTWD1Q8N5C7 304 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 EPN3Q9H201 632 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 TJP2Q9UDY2 1190 aa7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 ZNF214Q9UL59 606 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P3-201ENST00000502802 ERBB4Q15303 1308 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 TERTO14746 1132 aaKnown RBP7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 TMPRSS2O15393 492 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 SUSD5O60279 629 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 LONRF2Q1L5Z9 754 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 GNPTABQ3T906 1256 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 SLC6A19Q695T7 634 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 HID1Q8IV36 788 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 SLFN12Q8IYM2 578 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 ZSWIM2Q8NEG5 633 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 ZNF507Q8TCN5 953 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 UBASH3BQ8TF42 649 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 KLHL6Q8WZ60 621 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 TMEM87BQ96K49 555 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 SPATA9Q9BWV2 254 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 PCDH12Q9NPG4 1184 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 CRIM1Q9NZV1 1036 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 PPP1R9AQ9ULJ8 1098 aa7.53□□□□□ -1.2
HMGB1P3-201ENST00000502802 ASMTLO95671 621 aa7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 POLR2BP30876 1174 aaKnown RBP7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 DUOXA2Q1HG44 320 aa7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 TKFCQ3LXA3 575 aa7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 AKAP4Q5JQC9 854 aa7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 TRAPPC3LQ5T215 181 aa7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 MRPL41Q8IXM3 137 aaKnown RBP7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 PHACTR4Q8IZ21 702 aa7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 LRRC47Q8N1G4 583 aaKnown RBP7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 RNF214Q8ND24 703 aa7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 IRF7Q92985 503 aa7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 DHRS1Q96LJ7 313 aa7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 TMPRSS13Q9BYE2 586 aa7.52□□□□□ -1.21
HMGB1P3-201ENST00000502802 MEGF11A6BM72 1044 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 IQCA1LA6NCM1 817 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 RGS13O14921 159 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 FAM153BP0C7A2 387 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 SLURP2P0DP57 97 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 SLC10A6Q3KNW5 377 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 BBS9Q3SYG4 887 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 FBXO11Q86XK2 927 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 FANCD2OSQ96PS1 177 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 RUSC1Q9BVN2 902 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 ATXN3LQ9H3M9 355 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 CWC22Q9HCG8 908 aaKnown RBP7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 DISC1Q9NRI5 854 aa7.51□□□□□ -1.21
HMGB1P3-201ENST00000502802 RAB11FIP3O75154 756 aa7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 NTF4P34130 210 aa7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 ZNF143P52747 638 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 PMS1P54277 932 aaKnown RBP7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 TMEM67Q5HYA8 995 aa7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 ZC3H12BQ5HYM0 836 aaKnown RBP7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 ZBTB38Q8NAP3 1195 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 KCT2Q8NC54 265 aa7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 SGSM3Q96HU1 749 aa7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 CCDC74BQ96LY2 380 aa7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 SLC26A8Q96RN1 970 aa7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 KIF2CQ99661 725 aa7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 CYP4F12Q9HCS2 524 aa7.5□□□□□ -1.21
HMGB1P3-201ENST00000502802 DLL1O00548 723 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 ADCY3O60266 1144 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 GBP1P32455 592 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 MASP1P48740 699 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 DGKGP49619 791 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 NUTM2GQ5VZR2 741 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 CDC37L1Q7L3B6 337 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 TMEM192Q8IY95 271 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 SLC6A18Q96N87 628 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 SUGCTQ9HAC7 445 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 FBRSQ9HAH7 460 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 SUCOQ9UBS9 1254 aaKnown RBP7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 AP4E1Q9UPM8 1137 aa7.49□□□□□ -1.21
HMGB1P3-201ENST00000502802 CCDC163A0A0D9SF12 145 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 AGRPO00253 132 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 UBOX5O94941 541 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 CELA2BP08218 269 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 NAT2P11245 290 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 RAC1P63000 192 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 TTLL4Q14679 1199 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 NKG7Q16617 165 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 SV2CQ496J9 727 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 DALRD3Q5D0E6 543 aaKnown RBP7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 LYPD4Q6UWN0 246 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 FMR1NBQ8N0W7 255 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 SMG8Q8ND04 991 aaKnown RBP7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 RNF208Q9H0X6 261 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms