RNA–Protein interactions for RNA: ENST00000498353.5

NECAB3-216, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-216ENST00000498353 SHROOM1Q2M3G4 852 aaPredicted RBP21.27■■□□□ 1
NECAB3-216ENST00000498353 SLFNL1Q499Z3 407 aa21.27■■□□□ 1
NECAB3-216ENST00000498353 ZSCAN25Q6NSZ9 544 aa21.27■■□□□ 1
NECAB3-216ENST00000498353 SMCR8Q8TEV9 937 aaPredicted RBP21.27■■□□□ 1
NECAB3-216ENST00000498353 SDR42E1Q8WUS8 393 aa21.27■■□□□ 1
NECAB3-216ENST00000498353 GPATCH3Q96I76 525 aa21.27■■□□□ 1
NECAB3-216ENST00000498353 TRIM47Q96LD4 638 aa21.27■■□□□ 1
NECAB3-216ENST00000498353 ARMT1Q9H993 441 aa21.27■■□□□ 1
NECAB3-216ENST00000498353 DCP1AQ9NPI6 582 aaPredicted RBP21.27■■□□□ 1
NECAB3-216ENST00000498353 MYH1P12882 1939 aa21.27■■□□□ 1
NECAB3-216ENST00000498353 C19orf81C9J6K1 198 aa21.26■□□□□ 0.99
NECAB3-216ENST00000498353 POLR3DP05423 398 aaPredicted RBP21.26■□□□□ 0.99
NECAB3-216ENST00000498353 GABPAQ06546 454 aa21.26■□□□□ 0.99
NECAB3-216ENST00000498353 MTMR2Q13614 643 aa21.26■□□□□ 0.99
NECAB3-216ENST00000498353 MCM9Q9NXL9 1143 aa21.26■□□□□ 0.99
NECAB3-216ENST00000498353 SRRDQ9UH36 339 aa21.26■□□□□ 0.99
NECAB3-216ENST00000498353 USP17L10C9JJH3 530 aa21.25■□□□□ 0.99
NECAB3-216ENST00000498353 MBD4O95243 580 aa21.25■□□□□ 0.99
NECAB3-216ENST00000498353 FMNL1O95466 1100 aaPredicted RBP21.25■□□□□ 0.99
NECAB3-216ENST00000498353 GH2P01242 217 aa21.25■□□□□ 0.99
NECAB3-216ENST00000498353 CHGBP05060 677 aa21.25■□□□□ 0.99
NECAB3-216ENST00000498353 HOXD10P28358 340 aa21.25■□□□□ 0.99
NECAB3-216ENST00000498353 CERKLQ49MI3 558 aaPredicted RBP21.25■□□□□ 0.99
NECAB3-216ENST00000498353 NBPF11Q86T75 865 aa21.25■□□□□ 0.99
NECAB3-216ENST00000498353 CENPFP49454 3210 aa21.24■□□□□ 0.99
NECAB3-216ENST00000498353 ECM2O94769 699 aaPredicted RBP21.24■□□□□ 0.99
NECAB3-216ENST00000498353 OSBPP22059 807 aa21.24■□□□□ 0.99
NECAB3-216ENST00000498353 SHMT1P34896 483 aa21.24■□□□□ 0.99
NECAB3-216ENST00000498353 FCGRTP55899 365 aa21.24■□□□□ 0.99
NECAB3-216ENST00000498353 SLC9C1Q4G0N8 1177 aa21.24■□□□□ 0.99
NECAB3-216ENST00000498353 ZNF333Q96JL9 665 aa21.24■□□□□ 0.99
NECAB3-216ENST00000498353 ATP8A2Q9NTI2 1148 aa21.24■□□□□ 0.99
NECAB3-216ENST00000498353 TMOD4Q9NZQ9 345 aa21.24■□□□□ 0.99
NECAB3-216ENST00000498353 DDX60LQ5H9U9 1706 aaKnown RBP21.24■□□□□ 0.99
NECAB3-216ENST00000498353 LOC285556D6RIA3 1793 aa21.23■□□□□ 0.99
NECAB3-216ENST00000498353 ZSWIM8A7E2V4 1837 aa21.23■□□□□ 0.99
NECAB3-216ENST00000498353 PRKAB2O43741 272 aa21.23■□□□□ 0.99
NECAB3-216ENST00000498353 HOXA7P31268 230 aaPredicted RBP21.23■□□□□ 0.99
NECAB3-216ENST00000498353 ABCB5Q2M3G0 1257 aa21.23■□□□□ 0.99
NECAB3-216ENST00000498353 KBTBD3Q8NAB2 608 aa21.23■□□□□ 0.99
NECAB3-216ENST00000498353 TAOK2Q9UL54 1235 aa21.23■□□□□ 0.99
NECAB3-216ENST00000498353 TTC41PQ6P2S7 1318 aa21.23■□□□□ 0.99
NECAB3-216ENST00000498353 GCLCP48506 637 aaPredicted RBP21.22■□□□□ 0.99
NECAB3-216ENST00000498353 FAM110CQ1W6H9 321 aa21.22■□□□□ 0.99
NECAB3-216ENST00000498353 TSHZ3Q63HK5 1081 aa21.22■□□□□ 0.99
NECAB3-216ENST00000498353 PUS7LQ9H0K6 701 aaKnown RBP21.22■□□□□ 0.99
NECAB3-216ENST00000498353 ASCC2Q9H1I8 757 aaPredicted RBP21.22■□□□□ 0.99
NECAB3-216ENST00000498353 CABP5Q9NP86 173 aa21.22■□□□□ 0.99
NECAB3-216ENST00000498353 EVX2Q03828 476 aa21.21■□□□□ 0.99
NECAB3-216ENST00000498353 AAMPQ13685 434 aa21.21■□□□□ 0.99
NECAB3-216ENST00000498353 ANKRD13CQ8N6S4 541 aa21.21■□□□□ 0.99
NECAB3-216ENST00000498353 MYPNQ86TC9 1320 aa21.21■□□□□ 0.99
NECAB3-216ENST00000498353 NAV1Q8NEY1 1877 aa21.2■□□□□ 0.98
NECAB3-216ENST00000498353 CYP2D6P10635 497 aa21.2■□□□□ 0.98
NECAB3-216ENST00000498353 HDAC1Q13547 482 aaPredicted RBP21.2■□□□□ 0.98
NECAB3-216ENST00000498353 RAB3GAP1Q15042 981 aa21.2■□□□□ 0.98
NECAB3-216ENST00000498353 USP17L2Q6R6M4 530 aa21.2■□□□□ 0.98
NECAB3-216ENST00000498353 EMILIN3Q9NT22 766 aa21.2■□□□□ 0.98
NECAB3-216ENST00000498353 SWAP70Q9UH65 585 aa21.2■□□□□ 0.98
NECAB3-216ENST00000498353 POTEFA5A3E0 1075 aa21.19■□□□□ 0.98
NECAB3-216ENST00000498353 ERC2O15083 957 aa21.19■□□□□ 0.98
NECAB3-216ENST00000498353 PRKCZQ05513 592 aa21.19■□□□□ 0.98
NECAB3-216ENST00000498353 PI4K2BQ8TCG2 481 aa21.19■□□□□ 0.98
NECAB3-216ENST00000498353 RAET1EQ8TD07 263 aa21.19■□□□□ 0.98
NECAB3-216ENST00000498353 SH3TC2Q8TF17 1288 aa21.19■□□□□ 0.98
NECAB3-216ENST00000498353 GCC1Q96CN9 775 aa21.19■□□□□ 0.98
NECAB3-216ENST00000498353 C12orf42Q96LP6 360 aa21.19■□□□□ 0.98
NECAB3-216ENST00000498353 SLC4A4Q9Y6R1 1079 aa21.19■□□□□ 0.98
NECAB3-216ENST00000498353 RNF113AO15541 343 aaKnown RBP21.18■□□□□ 0.98
NECAB3-216ENST00000498353 GLRX3O76003 335 aaKnown RBP21.18■□□□□ 0.98
NECAB3-216ENST00000498353 ZFYP08048 801 aaPredicted RBP21.18■□□□□ 0.98
NECAB3-216ENST00000498353 GUCY1A2P33402 732 aa21.18■□□□□ 0.98
NECAB3-216ENST00000498353 USP14P54578 494 aa21.18■□□□□ 0.98
NECAB3-216ENST00000498353 IRX3P78415 501 aaPredicted RBP21.18■□□□□ 0.98
NECAB3-216ENST00000498353 C12orf60Q5U649 245 aa21.18■□□□□ 0.98
NECAB3-216ENST00000498353 OTUD7AQ8TE49 926 aaPredicted RBP21.18■□□□□ 0.98
NECAB3-216ENST00000498353 DDRGK1Q96HY6 314 aa21.18■□□□□ 0.98
NECAB3-216ENST00000498353 STRBPQ96SI9 672 aaKnown RBP21.18■□□□□ 0.98
NECAB3-216ENST00000498353 P2RX7Q99572 595 aaKnown RBP21.18■□□□□ 0.98
NECAB3-216ENST00000498353 TMEM106CQ9BVX2 250 aa21.18■□□□□ 0.98
NECAB3-216ENST00000498353 BRCA2P51587 3418 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 USP17L12C9JPN9 530 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 USP17L21D6R901 530 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 TNPO2O14787 897 aaKnown RBP21.17■□□□□ 0.98
NECAB3-216ENST00000498353 ANKRD45Q5TZF3 282 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 AMOTL1Q8IY63 956 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 APPBP2Q92624 585 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 DYNLL2Q96FJ2 89 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 KIAA1683Q9H0B3 1180 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 MORF4L1Q9UBU8 362 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 GABRQQ9UN88 632 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 SALL3Q9BXA9 1300 aa21.17■□□□□ 0.98
NECAB3-216ENST00000498353 MYH7P12883 1935 aa21.16■□□□□ 0.98
NECAB3-216ENST00000498353 MX1P20591 662 aa21.16■□□□□ 0.98
NECAB3-216ENST00000498353 GRK4P32298 578 aa21.16■□□□□ 0.98
NECAB3-216ENST00000498353 HERVK_113P62684 666 aa21.16■□□□□ 0.98
NECAB3-216ENST00000498353 SEPT2Q15019 361 aa21.16■□□□□ 0.98
NECAB3-216ENST00000498353 LRRFIP1Q32MZ4 808 aaKnown RBP21.16■□□□□ 0.98
NECAB3-216ENST00000498353 SLC44A5Q8NCS7 719 aa21.16■□□□□ 0.98
NECAB3-216ENST00000498353 ACER1Q8TDN7 264 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms