RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 TEKT1Q969V4 418 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 FAM163AQ96GL9 167 aaPredicted RBP9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 MXD3Q9BW11 206 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 LMBRD1Q9NUN5 540 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 ORC3Q9UBD5 711 aaPredicted RBP9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 SAP30BPQ9UHR5 308 aaKnown RBP9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 COL2A1P02458 1487 aaPredicted RBP9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 PLIN4Q96Q06 1357 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 C19orf67A6NJJ6 358 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 TSPY2A6NKD2 308 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 PPFIA3O75145 1194 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 PRPF40AO75400 957 aaKnown RBP9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 DDAH1O94760 285 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 FGRP09769 529 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 SCNN1DP51172 638 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 RHBDL3P58872 404 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 RESTQ13127 1097 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 PICALMQ13492 652 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 SEC23AQ15436 765 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 IFIT1BQ5T764 474 aaKnown RBP9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 SOGA3Q5TF21 947 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 C12orf60Q5U649 245 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 STRIP1Q5VSL9 837 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 ENAHQ8N8S7 591 aaPredicted RBP9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 C7orf43Q8WVR3 580 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 C8orf76Q96K31 380 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 ZSCAN10Q96SZ4 725 aaPredicted RBP9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 GZF1Q9H116 711 aaPredicted RBP9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 GDPD2Q9HCC8 539 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 MYH7BA7E2Y1 1941 aa9.42□□□□□ -0.9
PDZRN3-212ENST00000498048 OTOFQ9HC10 1997 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 MYO3BQ8WXR4 1341 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 USP17L3A6NCW0 530 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 USP17L4A6NCW7 530 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 CDC27P30260 824 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 CRKP46108 304 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 GUCY1B3Q02153 619 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 DNM1Q05193 864 aaKnown RBP9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 R3HDM1Q15032 1099 aaKnown RBP9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 DACT2Q5SW24 774 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 USP17L1Q7RTZ2 530 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 CATIPQ7Z7H3 387 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 RTKN2Q8IZC4 609 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 TMTC2Q8N394 836 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 NUP133Q8WUM0 1156 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 PHF12Q96QT6 1004 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 PSMD1Q99460 953 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 ZNF287Q9HBT7 754 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 WDR90Q96KV7 1748 aa9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 POLR2AP24928 1970 aaKnown RBP9.41□□□□□ -0.9
PDZRN3-212ENST00000498048 CCDC196A0A1B0GTZ2 297 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 TSPY3P0CV98 308 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 TSPY8P0CW00 308 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 CALM1P0DP23 149 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 CALM2P0DP24 149 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 CALM3P0DP25 149 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 DEKP35659 375 aaKnown RBP9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 IARSP41252 1262 aaKnown RBP9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 FAM47AQ5JRC9 791 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 CAVIN1Q6NZI2 390 aaKnown RBP9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 HHIPL2Q6UWX4 724 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 C16orf86Q6ZW13 317 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 KIAA0825Q8IV33 1275 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 TRIM22Q8IYM9 498 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 SLC44A5Q8NCS7 719 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 PHKBQ93100 1093 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 DYNLL2Q96FJ2 89 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 SLC26A6Q9BXS9 759 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 ZSCAN16Q9H4T2 348 aaPredicted RBP9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 RBM28Q9NW13 759 aaKnown RBP9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 TAOK2Q9UL54 1235 aa9.4□□□□□ -0.9
PDZRN3-212ENST00000498048 CNTNAP5Q8WYK1 1306 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 YDJCA8MPS7 323 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 NMT2O60551 498 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 HLA-DOAP06340 250 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 FDPSP14324 419 aaKnown RBP9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 IFNAR1P17181 557 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 KCNA3P22001 575 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 ADD1P35611 737 aaKnown RBP9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 RBM5P52756 815 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 TGFB2P61812 414 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 TRIM29Q14134 588 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 CCDC178Q5BJE1 867 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 USP48Q86UV5 1035 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 NIM1KQ8IY84 436 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 LARGE2Q8N3Y3 721 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 CTCFLQ8NI51 663 aaPredicted RBP9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 GPT2Q8TD30 523 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 WASF1Q92558 559 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 SYAP1Q96A49 352 aaPredicted RBP9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 ZDHHC15Q96MV8 337 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 ALG1Q9BT22 464 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 OSBPL5Q9H0X9 879 aaPredicted RBP9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 PCDHB8Q9UN66 801 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms