RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 GRM1Q13255 1194 aa18.79■□□□□ 0.6
PMF1-205ENST00000497069 ABCB5Q2M3G0 1257 aa18.79■□□□□ 0.6
PMF1-205ENST00000497069 CCDC17Q96LX7 622 aa18.79■□□□□ 0.6
PMF1-205ENST00000497069 SNCAIPQ9Y6H5 919 aa18.79■□□□□ 0.6
PMF1-205ENST00000497069 LAMB1P07942 1786 aa18.78■□□□□ 0.6
PMF1-205ENST00000497069 PRDM1O75626 825 aa18.78■□□□□ 0.6
PMF1-205ENST00000497069 ECE1P42892 770 aa18.78■□□□□ 0.6
PMF1-205ENST00000497069 MFSD6Q6ZSS7 791 aa18.78■□□□□ 0.6
PMF1-205ENST00000497069 ERO1BQ86YB8 467 aa18.78■□□□□ 0.6
PMF1-205ENST00000497069 GH2P01242 217 aa18.77■□□□□ 0.6
PMF1-205ENST00000497069 PCP11498 1178 aaKnown RBP18.77■□□□□ 0.6
PMF1-205ENST00000497069 RRP1BQ14684 758 aaKnown RBP18.77■□□□□ 0.6
PMF1-205ENST00000497069 AKNAD1Q5T1N1 836 aa18.77■□□□□ 0.6
PMF1-205ENST00000497069 RNF20Q5VTR2 975 aa18.77■□□□□ 0.6
PMF1-205ENST00000497069 CYP4F22Q6NT55 531 aa18.77■□□□□ 0.6
PMF1-205ENST00000497069 RASAL3Q86YV0 1011 aa18.77■□□□□ 0.6
PMF1-205ENST00000497069 OPTNQ96CV9 577 aa18.77■□□□□ 0.6
PMF1-205ENST00000497069 OTUD5Q96G74 571 aa18.77■□□□□ 0.6
PMF1-205ENST00000497069 ZBTB21Q9ULJ3 1066 aa18.77■□□□□ 0.6
PMF1-205ENST00000497069 SPDYE5A6NIY4 337 aa18.76■□□□□ 0.59
PMF1-205ENST00000497069 PTPRAP18433 802 aa18.76■□□□□ 0.59
PMF1-205ENST00000497069 RASA1P20936 1047 aa18.76■□□□□ 0.59
PMF1-205ENST00000497069 PPATQ06203 517 aa18.76■□□□□ 0.59
PMF1-205ENST00000497069 RAB3GAP1Q15042 981 aa18.76■□□□□ 0.59
PMF1-205ENST00000497069 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
PMF1-205ENST00000497069 TMEM179Q6ZVK1 233 aa18.76■□□□□ 0.59
PMF1-205ENST00000497069 STAG1Q8WVM7 1258 aa18.76■□□□□ 0.59
PMF1-205ENST00000497069 CAPNS2Q96L46 248 aa18.76■□□□□ 0.59
PMF1-205ENST00000497069 AS3MTQ9HBK9 375 aa18.76■□□□□ 0.59
PMF1-205ENST00000497069 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.76■□□□□ 0.59
PMF1-205ENST00000497069 USP17L5A8MUK1 530 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 EPB41L2O43491 1005 aaKnown RBP18.75■□□□□ 0.59
PMF1-205ENST00000497069 ORC4O43929 436 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 RANBP6O60518 1105 aaKnown RBP18.75■□□□□ 0.59
PMF1-205ENST00000497069 CYP21A2P08686 494 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 SLC10A3P09131 477 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 TSPY3P0CV98 308 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 TSPY8P0CW00 308 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 AKR1B1P15121 316 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 TRDNQ13061 729 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 WNK4Q96J92 1243 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 CNNM2Q9H8M5 875 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 ZHX2Q9Y6X8 837 aa18.75■□□□□ 0.59
PMF1-205ENST00000497069 OTOFQ9HC10 1997 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 TSPY2A6NKD2 308 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 SLC27A2O14975 620 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 FGRP09769 529 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 ZBTB48P10074 688 aaPredicted RBP18.74■□□□□ 0.59
PMF1-205ENST00000497069 NT5C2P49902 561 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 MKRN3Q13064 507 aaKnown RBP18.74■□□□□ 0.59
PMF1-205ENST00000497069 PPIL2Q13356 520 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 SPRYD7Q5W111 196 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 CREB3L3Q68CJ9 461 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 CNKSR2Q8WXI2 1034 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 ESR2Q92731 530 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 NBPF3Q9H094 633 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 INCENPQ9NQS7 918 aa18.74■□□□□ 0.59
PMF1-205ENST00000497069 ZKSCAN1P17029 563 aaPredicted RBP18.73■□□□□ 0.59
PMF1-205ENST00000497069 MCCP23508 829 aa18.73■□□□□ 0.59
PMF1-205ENST00000497069 JAG1P78504 1218 aa18.73■□□□□ 0.59
PMF1-205ENST00000497069 TFAP4Q01664 338 aa18.73■□□□□ 0.59
PMF1-205ENST00000497069 NOGQ13253 232 aa18.73■□□□□ 0.59
PMF1-205ENST00000497069 NECTIN1Q15223 517 aa18.73■□□□□ 0.59
PMF1-205ENST00000497069 SHROOM1Q2M3G4 852 aaPredicted RBP18.73■□□□□ 0.59
PMF1-205ENST00000497069 FAM47AQ5JRC9 791 aa18.73■□□□□ 0.59
PMF1-205ENST00000497069 RALYLQ86SE5 291 aaKnown RBP18.73■□□□□ 0.59
PMF1-205ENST00000497069 KRT23Q9C075 422 aa18.73■□□□□ 0.59
PMF1-205ENST00000497069 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.73■□□□□ 0.59
PMF1-205ENST00000497069 WDR33Q9C0J8 1336 aaKnown RBP18.73■□□□□ 0.59
PMF1-205ENST00000497069 DOCK1Q14185 1865 aa18.72■□□□□ 0.59
PMF1-205ENST00000497069 E7EWF7 191 aa18.72■□□□□ 0.59
PMF1-205ENST00000497069 VEGFBP49765 207 aa18.72■□□□□ 0.59
PMF1-205ENST00000497069 SEPT2Q15019 361 aa18.72■□□□□ 0.59
PMF1-205ENST00000497069 C8orf34Q49A92 452 aa18.72■□□□□ 0.59
PMF1-205ENST00000497069 CCDC84Q86UT8 332 aaPredicted RBP18.72■□□□□ 0.59
PMF1-205ENST00000497069 ZNF280CQ8ND82 737 aa18.72■□□□□ 0.59
PMF1-205ENST00000497069 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
PMF1-205ENST00000497069 NEDD4P46934 1319 aa18.72■□□□□ 0.59
PMF1-205ENST00000497069 TRIM75PA6NK02 468 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 FAM155AB1AL88 458 aaPredicted RBP18.71■□□□□ 0.59
PMF1-205ENST00000497069 IRF6O14896 467 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 GTF2A2P52657 109 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 ICA1Q05084 483 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 SNAPC2Q13487 334 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 PPP4R3BQ5MIZ7 849 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 NEDD1Q8NHV4 660 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 WDR18Q9BV38 432 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 USP26Q9BXU7 913 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 KANSL2Q9H9L4 492 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 AFG3L2Q9Y4W6 797 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 LAMA4Q16363 1823 aa18.71■□□□□ 0.59
PMF1-205ENST00000497069 CXCL11O14625 94 aa18.7■□□□□ 0.58
PMF1-205ENST00000497069 GJA5P36382 358 aa18.7■□□□□ 0.58
PMF1-205ENST00000497069 ATP2B2Q01814 1243 aa18.7■□□□□ 0.58
PMF1-205ENST00000497069 SPP2Q13103 211 aa18.7■□□□□ 0.58
PMF1-205ENST00000497069 NCOA7Q8NI08 942 aa18.7■□□□□ 0.58
PMF1-205ENST00000497069 FEZ1Q99689 392 aa18.7■□□□□ 0.58
PMF1-205ENST00000497069 SH2D4AQ9H788 454 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms