RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 C6orf229H3BNL8 230 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 LETM1O95202 739 aaPredicted RBP12.05□□□□□ -0.48
SAMM50-206ENST00000494795 PDIA4P13667 645 aaKnown RBP12.05□□□□□ -0.48
SAMM50-206ENST00000494795 IFIT1BQ5T764 474 aaKnown RBP12.05□□□□□ -0.48
SAMM50-206ENST00000494795 USP49Q70CQ1 688 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 DIS3L2Q8IYB7 885 aaKnown RBP12.05□□□□□ -0.48
SAMM50-206ENST00000494795 PDGFDQ9GZP0 370 aaPredicted RBP12.05□□□□□ -0.48
SAMM50-206ENST00000494795 PCDHB6Q9Y5E3 794 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 ERICH2A1L162 156 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 APBA3O96018 575 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
SAMM50-206ENST00000494795 RCSD1Q6JBY9 416 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 TBC1D16Q8TBP0 767 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 POLR3EQ9NVU0 708 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 PFKFB1P16118 471 aa12.04□□□□□ -0.48
SAMM50-206ENST00000494795 FAM160A1Q05DH4 1040 aa12.04□□□□□ -0.48
SAMM50-206ENST00000494795 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
SAMM50-206ENST00000494795 ADALQ6DHV7 355 aa12.04□□□□□ -0.48
SAMM50-206ENST00000494795 STAG2Q8N3U4 1231 aa12.04□□□□□ -0.48
SAMM50-206ENST00000494795 SRBD1Q8N5C6 995 aaKnown RBP12.04□□□□□ -0.48
SAMM50-206ENST00000494795 FAM200AQ8TCP9 573 aa12.04□□□□□ -0.48
SAMM50-206ENST00000494795 NOL7Q9UMY1 257 aaKnown RBP12.04□□□□□ -0.48
SAMM50-206ENST00000494795 PTMAP06454 111 aaKnown RBP12.04□□□□□ -0.48
SAMM50-206ENST00000494795 U2AF2P26368 475 aaKnown RBP eCLIP12.04□□□□□ -0.483e-6■■■□□ 15.4
SAMM50-206ENST00000494795 ZNF165P49910 485 aa12.04□□□□□ -0.48
SAMM50-206ENST00000494795 SLC35G1Q2M3R5 365 aa12.04□□□□□ -0.48
SAMM50-206ENST00000494795 MRPS27Q92552 414 aaKnown RBP12.04□□□□□ -0.48
SAMM50-206ENST00000494795 CRNKL1Q9BZJ0 848 aaKnown RBP12.04□□□□□ -0.48
SAMM50-206ENST00000494795 MMP1P03956 469 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 ST5P78524 1137 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 RNF41Q9H4P4 317 aaPredicted RBP12.03□□□□□ -0.48
SAMM50-206ENST00000494795 SEMA3EO15041 775 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 USP5P45974 858 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 SART3Q15020 963 aaKnown RBP12.03□□□□□ -0.48
SAMM50-206ENST00000494795 SLC39A14Q15043 492 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 SASS6Q6UVJ0 657 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 CCDC73Q6ZRK6 1079 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 CLEC10AQ8IUN9 316 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 RTFDC1Q9BY42 306 aaPredicted RBP12.03□□□□□ -0.48
SAMM50-206ENST00000494795 KCNF1Q9H3M0 494 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 CABP5Q9NP86 173 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 ZNF202O95125 648 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 FGRP09769 529 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 GTF2IP78347 998 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 TFAP4Q01664 338 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 PTPN21Q16825 1174 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 DPCR1Q3MIW9 517 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 MFSD14BQ5SR56 506 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 GGA1Q9UJY5 639 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 LEMD3Q9Y2U8 911 aa12.03□□□□□ -0.48
SAMM50-206ENST00000494795 TSPY2A6NKD2 308 aa12.02□□□□□ -0.48
SAMM50-206ENST00000494795 KINO60870 393 aaKnown RBP12.02□□□□□ -0.48
SAMM50-206ENST00000494795 CDKL5O76039 1030 aa12.02□□□□□ -0.48
SAMM50-206ENST00000494795 GOLGA8HP0CJ92 632 aa12.02□□□□□ -0.48
SAMM50-206ENST00000494795 BTDP43251 543 aa12.02□□□□□ -0.48
SAMM50-206ENST00000494795 BRAPQ7Z569 592 aa12.02□□□□□ -0.48
SAMM50-206ENST00000494795 GRAMD1CQ8IYS0 662 aa12.02□□□□□ -0.48
SAMM50-206ENST00000494795 CERS5Q8N5B7 392 aa12.02□□□□□ -0.48
SAMM50-206ENST00000494795 IQCB1Q15051 598 aa12.02□□□□□ -0.49
SAMM50-206ENST00000494795 NPY5RQ15761 445 aa12.02□□□□□ -0.49
SAMM50-206ENST00000494795 C12orf60Q5U649 245 aa12.02□□□□□ -0.49
SAMM50-206ENST00000494795 NOSTRINQ8IVI9 506 aa12.02□□□□□ -0.49
SAMM50-206ENST00000494795 SDF4Q9BRK5 362 aa12.02□□□□□ -0.49
SAMM50-206ENST00000494795 ZKSCAN5Q9Y2L8 839 aa12.02□□□□□ -0.49
SAMM50-206ENST00000494795 KIAA1551Q9HCM1 1747 aa12.02□□□□□ -0.49
SAMM50-206ENST00000494795 MMP10P09238 476 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 SCNN1DP51172 638 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 ARID5BQ14865 1188 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 SLC27A3Q5K4L6 730 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 CPLX2Q6PUV4 134 aaKnown RBP12.01□□□□□ -0.49
SAMM50-206ENST00000494795 FOXP4Q8IVH2 680 aaPredicted RBP12.01□□□□□ -0.49
SAMM50-206ENST00000494795 YEATS4O95619 227 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 PNOCQ13519 176 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 ZNF804AQ7Z570 1209 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 DHX40Q8IX18 779 aaKnown RBP12.01□□□□□ -0.49
SAMM50-206ENST00000494795 GPKOWQ92917 476 aaPredicted RBP eCLIP12.01□□□□□ -0.49
SAMM50-206ENST00000494795 RBM17Q96I25 401 aaKnown RBP12.01□□□□□ -0.49
SAMM50-206ENST00000494795 MSNP26038 577 aaKnown RBP12.01□□□□□ -0.49
SAMM50-206ENST00000494795 LRMPQ12912 555 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 TRIM29Q14134 588 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 UVSSAQ2YD98 709 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 LONRF3Q496Y0 759 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 TYW1BQ6NUM6 668 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 RASGRP4Q8TDF6 673 aa12.01□□□□□ -0.49
SAMM50-206ENST00000494795 CASP1P29466 404 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 PICALMQ13492 652 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 SHROOM1Q2M3G4 852 aaPredicted RBP12□□□□□ -0.49
SAMM50-206ENST00000494795 IQCA1Q86XH1 822 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 PDILTQ8N807 584 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 KCNG4Q8TDN1 519 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 AKT1S1Q96B36 256 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 ATP8A2Q9NTI2 1148 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 PYCARDQ9ULZ3 195 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 ANKRD31Q8N7Z5 1873 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 PPEF1O14829 653 aaPredicted RBP12□□□□□ -0.49
SAMM50-206ENST00000494795 DEXIO95424 95 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 PTGS1P23219 599 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 RHBDL3P58872 404 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms