RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SLC44A5Q8NCS7 719 aa16.19■□□□□ 0.18
COL1A1-208ENST00000494334 NAPBQ9H115 298 aa16.19■□□□□ 0.18
COL1A1-208ENST00000494334 SWAP70Q9UH65 585 aa16.19■□□□□ 0.18
COL1A1-208ENST00000494334 TAOK2Q9UL54 1235 aa16.19■□□□□ 0.18
COL1A1-208ENST00000494334 KCNH4Q9UQ05 1017 aa16.19■□□□□ 0.18
COL1A1-208ENST00000494334 AFG3L2Q9Y4W6 797 aa16.19■□□□□ 0.18
COL1A1-208ENST00000494334 CCDC171Q6TFL3 1326 aa16.19■□□□□ 0.18
COL1A1-208ENST00000494334 ASNSP08243 561 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 HSPD1P10809 573 aaKnown RBP16.18■□□□□ 0.18
COL1A1-208ENST00000494334 CHMLP26374 656 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 CDK8P49336 464 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 SNAPC2Q13487 334 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 C16orf86Q6ZW13 317 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 PTPN18Q99952 460 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 BEGAINQ9BUH8 593 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 IL25Q9H293 177 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 GINM1Q9NU53 330 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 RNF186Q9NXI6 227 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 ZBTB21Q9ULJ3 1066 aa16.18■□□□□ 0.18
COL1A1-208ENST00000494334 CCL15-CCL14A0A0B4J2E2 113 aa16.17■□□□□ 0.18
COL1A1-208ENST00000494334 USP17L5A8MUK1 530 aa16.17■□□□□ 0.18
COL1A1-208ENST00000494334 CXCL11O14625 94 aa16.17■□□□□ 0.18
COL1A1-208ENST00000494334 GH2P01242 217 aa16.17■□□□□ 0.18
COL1A1-208ENST00000494334 MFAP1P55081 439 aaKnown RBP16.17■□□□□ 0.18
COL1A1-208ENST00000494334 ALX1Q15699 326 aa16.17■□□□□ 0.18
COL1A1-208ENST00000494334 CCL15Q16663 113 aa16.17■□□□□ 0.18
COL1A1-208ENST00000494334 BMP2KLQ5H9B9 411 aa16.17■□□□□ 0.18
COL1A1-208ENST00000494334 IFNL1Q8IU54 200 aa16.17■□□□□ 0.18
COL1A1-208ENST00000494334 BRI3BPQ8WY22 251 aa16.17■□□□□ 0.18
COL1A1-208ENST00000494334 BAZ2AQ9UIF9 1905 aaKnown RBP16.16■□□□□ 0.18
COL1A1-208ENST00000494334 IGF2BP3O00425 579 aaKnown RBP eCLIP16.16■□□□□ 0.18
COL1A1-208ENST00000494334 FOXN1O15353 648 aa16.16■□□□□ 0.18
COL1A1-208ENST00000494334 FGAP02671 866 aa16.16■□□□□ 0.18
COL1A1-208ENST00000494334 CETPP11597 493 aa16.16■□□□□ 0.18
COL1A1-208ENST00000494334 ABCB5Q2M3G0 1257 aa16.16■□□□□ 0.18
COL1A1-208ENST00000494334 STK11IPQ8N1F8 1099 aa16.16■□□□□ 0.18
COL1A1-208ENST00000494334 CABP5Q9NP86 173 aa16.16■□□□□ 0.18
COL1A1-208ENST00000494334 ROBO3Q96MS0 1386 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 TRIM75PA6NK02 468 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 TRPA1O75762 1119 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 GUCY1A2P33402 732 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 PPARAQ07869 468 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 SPP2Q13103 211 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 MOGSQ13724 837 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 ZNF280CQ8ND82 737 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 WDR18Q9BV38 432 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 TBC1D2Q9BYX2 928 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 AS3MTQ9HBK9 375 aa16.15■□□□□ 0.18
COL1A1-208ENST00000494334 A0A0G2JLL6 359 aaPredicted RBP16.14■□□□□ 0.17
COL1A1-208ENST00000494334 MPHOSPH10O00566 681 aaKnown RBP16.14■□□□□ 0.17
COL1A1-208ENST00000494334 CA12O43570 354 aa16.14■□□□□ 0.17
COL1A1-208ENST00000494334 AKR1B1P15121 316 aa16.14■□□□□ 0.17
COL1A1-208ENST00000494334 RAB3GAP1Q15042 981 aa16.14■□□□□ 0.17
COL1A1-208ENST00000494334 PRRT2Q7Z6L0 340 aaPredicted RBP16.14■□□□□ 0.17
COL1A1-208ENST00000494334 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
COL1A1-208ENST00000494334 RUFY2Q8WXA3 655 aa16.14■□□□□ 0.17
COL1A1-208ENST00000494334 CCDC17Q96LX7 622 aa16.14■□□□□ 0.17
COL1A1-208ENST00000494334 SAGE1Q9NXZ1 904 aa16.14■□□□□ 0.17
COL1A1-208ENST00000494334 TSKSQ9UJT2 592 aa16.14■□□□□ 0.17
COL1A1-208ENST00000494334 RAD50Q92878 1312 aa16.14■□□□□ 0.17
COL1A1-208ENST00000494334 DOCK1Q14185 1865 aa16.14■□□□□ 0.17
COL1A1-208ENST00000494334 BTBD19C9JJ37 291 aa16.13■□□□□ 0.17
COL1A1-208ENST00000494334 ALDH1A1P00352 501 aa16.13■□□□□ 0.17
COL1A1-208ENST00000494334 CTDSPL2Q05D32 466 aa16.13■□□□□ 0.17
COL1A1-208ENST00000494334 SEPT2Q15019 361 aa16.13■□□□□ 0.17
COL1A1-208ENST00000494334 OTUD7BQ6GQQ9 843 aa16.13■□□□□ 0.17
COL1A1-208ENST00000494334 DSCC1Q9BVC3 393 aa16.13■□□□□ 0.17
COL1A1-208ENST00000494334 MKNK2Q9HBH9 465 aa16.13■□□□□ 0.17
COL1A1-208ENST00000494334 ANAPC4Q9UJX5 808 aa16.13■□□□□ 0.17
COL1A1-208ENST00000494334 ZMYM6O95789 1325 aa16.13■□□□□ 0.17
COL1A1-208ENST00000494334 SGSM2O43147 1006 aa16.12■□□□□ 0.17
COL1A1-208ENST00000494334 PRDM1O75626 825 aa16.12■□□□□ 0.17
COL1A1-208ENST00000494334 SLC3A2P08195 630 aaKnown RBP16.12■□□□□ 0.17
COL1A1-208ENST00000494334 HSPA8P11142 646 aaKnown RBP16.12■□□□□ 0.17
COL1A1-208ENST00000494334 RASA1P20936 1047 aa16.12■□□□□ 0.17
COL1A1-208ENST00000494334 CTCFP49711 727 aaPredicted RBP16.12■□□□□ 0.17
COL1A1-208ENST00000494334 SH3D19Q5HYK7 790 aa16.12■□□□□ 0.17
COL1A1-208ENST00000494334 GPAT2Q6NUI2 795 aa16.12■□□□□ 0.17
COL1A1-208ENST00000494334 TMEM179Q6ZVK1 233 aa16.12■□□□□ 0.17
COL1A1-208ENST00000494334 FASTKD5Q7L8L6 764 aaKnown RBP16.12■□□□□ 0.17
COL1A1-208ENST00000494334 TACC3Q9Y6A5 838 aa16.12■□□□□ 0.17
COL1A1-208ENST00000494334 USP17L10C9JJH3 530 aa16.11■□□□□ 0.17
COL1A1-208ENST00000494334 TBC1D8O95759 1140 aa16.11■□□□□ 0.17
COL1A1-208ENST00000494334 BACE1P56817 501 aa16.11■□□□□ 0.17
COL1A1-208ENST00000494334 PDE4BQ07343 736 aa16.11■□□□□ 0.17
COL1A1-208ENST00000494334 ANKRD23Q86SG2 305 aa16.11■□□□□ 0.17
COL1A1-208ENST00000494334 ZNF444Q8N0Y2 327 aaPredicted RBP16.11■□□□□ 0.17
COL1A1-208ENST00000494334 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL1A1-208ENST00000494334 CFHR5Q9BXR6 569 aa16.11■□□□□ 0.17
COL1A1-208ENST00000494334 R3HDMLQ9H3Y0 253 aa16.11■□□□□ 0.17
COL1A1-208ENST00000494334 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
COL1A1-208ENST00000494334 INCENPQ9NQS7 918 aa16.11■□□□□ 0.17
COL1A1-208ENST00000494334 C19orf81C9J6K1 198 aa16.1■□□□□ 0.17
COL1A1-208ENST00000494334 LBX1P52954 281 aa16.1■□□□□ 0.17
COL1A1-208ENST00000494334 HMGCS2P54868 508 aa16.1■□□□□ 0.17
COL1A1-208ENST00000494334 HAND2P61296 217 aa16.1■□□□□ 0.17
COL1A1-208ENST00000494334 DGKZQ13574 1117 aa16.1■□□□□ 0.17
COL1A1-208ENST00000494334 MTMR2Q13614 643 aa16.1■□□□□ 0.17
COL1A1-208ENST00000494334 GADL1Q6ZQY3 521 aa16.1■□□□□ 0.17
COL1A1-208ENST00000494334 SIAH1Q8IUQ4 282 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms