RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 ERC1Q8IUD2 1116 aa29.15■■■□□ 2.26
TTC3-224ENST00000494243 MAGEB6Q8N7X4 407 aa29.15■■■□□ 2.26
TTC3-224ENST00000494243 U2AF1L4Q8WU68 220 aaKnown RBP29.15■■■□□ 2.26
TTC3-224ENST00000494243 GINM1Q9NU53 330 aa29.15■■■□□ 2.26
TTC3-224ENST00000494243 GDF11O95390 407 aa29.14■■■□□ 2.26
TTC3-224ENST00000494243 HOXA7P31268 230 aaPredicted RBP29.13■■■□□ 2.25
TTC3-224ENST00000494243 TRIM34Q9BYJ4 488 aa29.13■■■□□ 2.25
TTC3-224ENST00000494243 ZBTB21Q9ULJ3 1066 aa29.13■■■□□ 2.25
TTC3-224ENST00000494243 C19orf81C9J6K1 198 aa29.12■■■□□ 2.25
TTC3-224ENST00000494243 SGPL1O95470 568 aa29.12■■■□□ 2.25
TTC3-224ENST00000494243 HLA-DOAP06340 250 aa29.12■■■□□ 2.25
TTC3-224ENST00000494243 RHPN1Q8TCX5 695 aa29.12■■■□□ 2.25
TTC3-224ENST00000494243 IL1RAPL2Q9NP60 686 aa29.12■■■□□ 2.25
TTC3-224ENST00000494243 MORF4L1Q9UBU8 362 aa29.12■■■□□ 2.25
TTC3-224ENST00000494243 GJD2Q9UKL4 321 aa29.12■■■□□ 2.25
TTC3-224ENST00000494243 COLQQ9Y215 455 aaPredicted RBP29.12■■■□□ 2.25
TTC3-224ENST00000494243 USP17L10C9JJH3 530 aa29.11■■■□□ 2.25
TTC3-224ENST00000494243 CERS3Q8IU89 383 aa29.11■■■□□ 2.25
TTC3-224ENST00000494243 P2RX7Q99572 595 aaKnown RBP29.11■■■□□ 2.25
TTC3-224ENST00000494243 TMOD4Q9NZQ9 345 aa29.11■■■□□ 2.25
TTC3-224ENST00000494243 MAP3K12Q12852 859 aa29.1■■■□□ 2.25
TTC3-224ENST00000494243 TAOK2Q9UL54 1235 aa29.1■■■□□ 2.25
TTC3-224ENST00000494243 USP5P45974 858 aa29.09■■■□□ 2.25
TTC3-224ENST00000494243 IRX3P78415 501 aaPredicted RBP29.09■■■□□ 2.25
TTC3-224ENST00000494243 HSP90AB4PQ58FF6 505 aa29.09■■■□□ 2.25
TTC3-224ENST00000494243 TATDN1Q6P1N9 297 aa29.09■■■□□ 2.25
TTC3-224ENST00000494243 TMED8Q6PL24 325 aaPredicted RBP29.09■■■□□ 2.25
TTC3-224ENST00000494243 PAK6Q9NQU5 681 aaPredicted RBP29.09■■■□□ 2.25
TTC3-224ENST00000494243 MYH1P12882 1939 aa29.09■■■□□ 2.25
TTC3-224ENST00000494243 PEX10O60683 326 aa29.08■■■□□ 2.25
TTC3-224ENST00000494243 MS4A1P11836 297 aa29.08■■■□□ 2.25
TTC3-224ENST00000494243 SIRT2Q8IXJ6 389 aa29.08■■■□□ 2.25
TTC3-224ENST00000494243 DPF3Q92784 378 aa29.08■■■□□ 2.25
TTC3-224ENST00000494243 DEFB118Q96PH6 123 aa29.08■■■□□ 2.25
TTC3-224ENST00000494243 RIOK1Q9BRS2 568 aaKnown RBP29.08■■■□□ 2.25
TTC3-224ENST00000494243 EMILIN3Q9NT22 766 aa29.08■■■□□ 2.25
TTC3-224ENST00000494243 FARP2O94887 1054 aaPredicted RBP29.07■■■□□ 2.24
TTC3-224ENST00000494243 GH2P01242 217 aa29.07■■■□□ 2.24
TTC3-224ENST00000494243 EHD4Q9H223 541 aa29.07■■■□□ 2.24
TTC3-224ENST00000494243 TXNRD2Q9NNW7 524 aa29.07■■■□□ 2.24
TTC3-224ENST00000494243 HERVK_113P62684 666 aa29.06■■■□□ 2.24
TTC3-224ENST00000494243 RPAP2Q8IXW5 612 aaPredicted RBP29.06■■■□□ 2.24
TTC3-224ENST00000494243 ZBTB40Q9NUA8 1239 aa29.06■■■□□ 2.24
TTC3-224ENST00000494243 RBPJLQ9UBG7 517 aa29.06■■■□□ 2.24
TTC3-224ENST00000494243 SERPINB13Q9UIV8 391 aa29.06■■■□□ 2.24
TTC3-224ENST00000494243 FXR1P51114 621 aaKnown RBP eCLIP29.05■■■□□ 2.24
TTC3-224ENST00000494243 POTEEQ6S8J3 1075 aa29.05■■■□□ 2.24
TTC3-224ENST00000494243 HTATIP2Q9BUP3 242 aa29.05■■■□□ 2.24
TTC3-224ENST00000494243 CRISPLD2Q9H0B8 497 aa29.05■■■□□ 2.24
TTC3-224ENST00000494243 COG6Q9Y2V7 657 aa29.05■■■□□ 2.24
TTC3-224ENST00000494243 PLXNB2O15031 1838 aa29.05■■■□□ 2.24
TTC3-224ENST00000494243 TFRCP02786 760 aaKnown RBP29.04■■■□□ 2.24
TTC3-224ENST00000494243 KIF1BPQ96EK5 621 aa29.04■■■□□ 2.24
TTC3-224ENST00000494243 CEP290O15078 2479 aa29.03■■■□□ 2.24
TTC3-224ENST00000494243 APBB1O00213 710 aa29.03■■■□□ 2.24
TTC3-224ENST00000494243 HMGCRP04035 888 aa29.03■■■□□ 2.24
TTC3-224ENST00000494243 CAPN2P17655 700 aa29.03■■■□□ 2.24
TTC3-224ENST00000494243 PLCD1P51178 756 aa29.03■■■□□ 2.24
TTC3-224ENST00000494243 TTF1Q15361 905 aaPredicted RBP29.03■■■□□ 2.24
TTC3-224ENST00000494243 USP17L2Q6R6M4 530 aa29.03■■■□□ 2.24
TTC3-224ENST00000494243 TTC6Q86TZ1 520 aa29.03■■■□□ 2.24
TTC3-224ENST00000494243 CLASRPQ8N2M8 674 aaKnown RBP29.03■■■□□ 2.24
TTC3-224ENST00000494243 GPRC5AQ8NFJ5 357 aa29.03■■■□□ 2.24
TTC3-224ENST00000494243 DDX19BQ9UMR2 479 aa29.03■■■□□ 2.24
TTC3-224ENST00000494243 PDE6AP16499 860 aa29.02■■■□□ 2.24
TTC3-224ENST00000494243 TRIM32Q13049 653 aa29.02■■■□□ 2.24
TTC3-224ENST00000494243 Q3C1V9 767 aa29.02■■■□□ 2.24
TTC3-224ENST00000494243 SLC9C2Q5TAH2 1124 aa29.02■■■□□ 2.24
TTC3-224ENST00000494243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.02■■■□□ 2.24
TTC3-224ENST00000494243 C12orf42Q96LP6 360 aa29.02■■■□□ 2.24
TTC3-224ENST00000494243 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.02■■■□□ 2.242e-10■□□□□ 9.5
TTC3-224ENST00000494243 MAGEB6P1A0A0J9YX57 407 aa29.01■■■□□ 2.23
TTC3-224ENST00000494243 SHMT1P34896 483 aa29.01■■■□□ 2.23
TTC3-224ENST00000494243 CERKLQ49MI3 558 aaPredicted RBP29.01■■■□□ 2.23
TTC3-224ENST00000494243 DDX60LQ5H9U9 1706 aaKnown RBP29■■■□□ 2.23
TTC3-224ENST00000494243 HMMRO75330 724 aa29■■■□□ 2.23
TTC3-224ENST00000494243 TCRBV5S4A2TA0A5A2 114 aa28.99■■■□□ 2.23
TTC3-224ENST00000494243 GOLIM4O00461 696 aa28.99■■■□□ 2.23
TTC3-224ENST00000494243 GABPAQ06546 454 aa28.99■■■□□ 2.23
TTC3-224ENST00000494243 ABCB5Q2M3G0 1257 aa28.99■■■□□ 2.23
TTC3-224ENST00000494243 CHRDL2Q6WN34 429 aa28.99■■■□□ 2.23
TTC3-224ENST00000494243 TRIB2Q92519 343 aa28.99■■■□□ 2.23
TTC3-224ENST00000494243 PORCNQ9H237 461 aa28.99■■■□□ 2.23
TTC3-224ENST00000494243 RPTORQ8N122 1335 aa28.98■■■□□ 2.23
TTC3-224ENST00000494243 ZNF532Q9HCE3 1301 aa28.98■■■□□ 2.23
TTC3-224ENST00000494243 IFIT2P09913 472 aaKnown RBP28.98■■■□□ 2.23
TTC3-224ENST00000494243 CYP2B6P20813 491 aa28.98■■■□□ 2.23
TTC3-224ENST00000494243 ERVK-9P63128 1117 aa28.98■■■□□ 2.23
TTC3-224ENST00000494243 ERVK-24P63145 666 aa28.98■■■□□ 2.23
TTC3-224ENST00000494243 EVX2Q03828 476 aa28.98■■■□□ 2.23
TTC3-224ENST00000494243 RAB3GAP1Q15042 981 aa28.98■■■□□ 2.23
TTC3-224ENST00000494243 ZYXQ15942 572 aaKnown RBP28.98■■■□□ 2.23
TTC3-224ENST00000494243 ACER1Q8TDN7 264 aa28.98■■■□□ 2.23
TTC3-224ENST00000494243 EDC3Q96F86 508 aaKnown RBP28.98■■■□□ 2.23
TTC3-224ENST00000494243 KIAA1683Q9H0B3 1180 aa28.98■■■□□ 2.23
TTC3-224ENST00000494243 RAB11FIP3O75154 756 aa28.97■■■□□ 2.23
TTC3-224ENST00000494243 MAPK4P31152 587 aa28.97■■■□□ 2.23
TTC3-224ENST00000494243 GUCY1A2P33402 732 aa28.97■■■□□ 2.23
TTC3-224ENST00000494243 GTF3C2Q8WUA4 911 aaPredicted RBP28.97■■■□□ 2.23
TTC3-224ENST00000494243 USP6NLQ92738 828 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms