RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 TSPY2A6NKD2 308 aa18.64■□□□□ 0.57
HPS4-216ENST00000493455 ABCB5Q2M3G0 1257 aa18.64■□□□□ 0.57
HPS4-216ENST00000493455 ELP3Q9H9T3 547 aa18.64■□□□□ 0.57
HPS4-216ENST00000493455 CABP5Q9NP86 173 aa18.64■□□□□ 0.57
HPS4-216ENST00000493455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
HPS4-216ENST00000493455 SNX14Q9Y5W7 946 aa18.64■□□□□ 0.57
HPS4-216ENST00000493455 CSADQ9Y600 493 aa18.64■□□□□ 0.57
HPS4-216ENST00000493455 PHF20L1A8MW92 1017 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 KDM4AO75164 1064 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 GH2P01242 217 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 TSPY3P0CV98 308 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 TSPY8P0CW00 308 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 HUNKP57058 714 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 MAP3K9P80192 1104 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 TFAP4Q01664 338 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 RAB3GAP1Q15042 981 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 TATDN1Q6P1N9 297 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 CCDC84Q86UT8 332 aaPredicted RBP18.63■□□□□ 0.57
HPS4-216ENST00000493455 METTL16Q86W50 562 aaKnown RBP18.63■□□□□ 0.57
HPS4-216ENST00000493455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.63■□□□□ 0.57
HPS4-216ENST00000493455 CLMNQ96JQ2 1002 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 C22orf23Q9BZE7 217 aa18.63■□□□□ 0.57
HPS4-216ENST00000493455 TMEM88BA6NKF7 163 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 EPB41L2O43491 1005 aaKnown RBP18.62■□□□□ 0.57
HPS4-216ENST00000493455 CAP2P40123 477 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 JAG1P78504 1218 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 MAP3K10Q02779 954 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 VGLL4Q14135 290 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 ADCK5Q3MIX3 580 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 PAXIP1Q6ZW49 1069 aaPredicted RBP18.62■□□□□ 0.57
HPS4-216ENST00000493455 CHST3Q7LGC8 479 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 CLEC10AQ8IUN9 316 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 SCYL3Q8IZE3 742 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 NCOA7Q8NI08 942 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 NKX2-3Q8TAU0 364 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 ESR2Q92731 530 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 JAKMIP1Q96N16 626 aaKnown RBP18.62■□□□□ 0.57
HPS4-216ENST00000493455 ZKSCAN3Q9BRR0 538 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 KRT23Q9C075 422 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 CNNM2Q9H8M5 875 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 PICK1Q9NRD5 415 aa18.62■□□□□ 0.57
HPS4-216ENST00000493455 ORC4O43929 436 aa18.61■□□□□ 0.57
HPS4-216ENST00000493455 CTNND1O60716 968 aaKnown RBP18.61■□□□□ 0.57
HPS4-216ENST00000493455 FKBP1BP68106 108 aa18.61■□□□□ 0.57
HPS4-216ENST00000493455 ATP2B2Q01814 1243 aa18.61■□□□□ 0.57
HPS4-216ENST00000493455 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.61■□□□□ 0.57
HPS4-216ENST00000493455 ANKRD13AQ8IZ07 590 aa18.61■□□□□ 0.57
HPS4-216ENST00000493455 ZNF112Q9UJU3 913 aa18.61■□□□□ 0.57
HPS4-216ENST00000493455 ZBTB21Q9ULJ3 1066 aa18.61■□□□□ 0.57
HPS4-216ENST00000493455 MYH4Q9Y623 1939 aa18.61■□□□□ 0.57
HPS4-216ENST00000493455 NMT2O60551 498 aa18.6■□□□□ 0.57
HPS4-216ENST00000493455 PCP11498 1178 aaKnown RBP18.6■□□□□ 0.57
HPS4-216ENST00000493455 CPA1P15085 419 aa18.6■□□□□ 0.57
HPS4-216ENST00000493455 MKRN3Q13064 507 aaKnown RBP18.6■□□□□ 0.57
HPS4-216ENST00000493455 GRM1Q13255 1194 aa18.6■□□□□ 0.57
HPS4-216ENST00000493455 KRT32Q14532 448 aa18.6■□□□□ 0.57
HPS4-216ENST00000493455 SEPT2Q15019 361 aa18.6■□□□□ 0.57
HPS4-216ENST00000493455 CCDC17Q96LX7 622 aa18.6■□□□□ 0.57
HPS4-216ENST00000493455 SNCAIPQ9Y6H5 919 aa18.6■□□□□ 0.57
HPS4-216ENST00000493455 CASTP20810 708 aaKnown RBP18.59■□□□□ 0.57
HPS4-216ENST00000493455 APLP1P51693 650 aa18.59■□□□□ 0.57
HPS4-216ENST00000493455 MAP3K11Q16584 847 aa18.59■□□□□ 0.57
HPS4-216ENST00000493455 CYB5R4Q7L1T6 521 aa18.59■□□□□ 0.57
HPS4-216ENST00000493455 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
HPS4-216ENST00000493455 SLC10A4Q96EP9 437 aa18.59■□□□□ 0.57
HPS4-216ENST00000493455 TCEANC2Q96MN5 208 aa18.59■□□□□ 0.57
HPS4-216ENST00000493455 NEK1Q96PY6 1258 aa18.59■□□□□ 0.57
HPS4-216ENST00000493455 GREB1LQ9C091 1923 aaPredicted RBP18.59■□□□□ 0.57
HPS4-216ENST00000493455 ASNSP08243 561 aa18.58■□□□□ 0.56
HPS4-216ENST00000493455 FGRP09769 529 aa18.58■□□□□ 0.56
HPS4-216ENST00000493455 COL9A3Q14050 684 aaPredicted RBP18.58■□□□□ 0.56
HPS4-216ENST00000493455 TMEM179Q6ZVK1 233 aa18.58■□□□□ 0.56
HPS4-216ENST00000493455 OTUD5Q96G74 571 aa18.58■□□□□ 0.56
HPS4-216ENST00000493455 UBAC1Q9BSL1 405 aa18.58■□□□□ 0.56
HPS4-216ENST00000493455 LRRC2Q9BYS8 371 aa18.58■□□□□ 0.56
HPS4-216ENST00000493455 TAOK2Q9UL54 1235 aa18.58■□□□□ 0.56
HPS4-216ENST00000493455 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.56
HPS4-216ENST00000493455 PRC1O43663 620 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 RAD21O60216 631 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 HTRA3P83110 453 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 ICA1Q05084 483 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 NOL9Q5SY16 702 aaKnown RBP18.57■□□□□ 0.56
HPS4-216ENST00000493455 LDLRAD1Q5T700 205 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 BLOC1S2Q6QNY1 142 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 MB21D2Q8IYB1 491 aaPredicted RBP18.57■□□□□ 0.56
HPS4-216ENST00000493455 NEDD1Q8NHV4 660 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 KCNB2Q92953 911 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 CHMP4CQ96CF2 233 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 UPF3BQ9BZI7 483 aaKnown RBP18.57■□□□□ 0.56
HPS4-216ENST00000493455 ZSWIM5Q9P217 1185 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 TLL2Q9Y6L7 1015 aa18.57■□□□□ 0.56
HPS4-216ENST00000493455 USP17L5A8MUK1 530 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 PTPRAP18433 802 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 PSMA5P28066 241 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 GUCY1A2P33402 732 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 ZNF157P51786 506 aaPredicted RBP18.56■□□□□ 0.56
HPS4-216ENST00000493455 ZYXQ15942 572 aaKnown RBP18.56■□□□□ 0.56
HPS4-216ENST00000493455 TSGA10IPQ3SY00 556 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 SAPCD2Q86UD0 394 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 IQCA1Q86XH1 822 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms