RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ALDH1A1P00352 501 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 CETPP11597 493 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 CAP2P40123 477 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 PLCD1P51178 756 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 KIF23Q02241 960 aaPredicted RBP9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 PPIL2Q13356 520 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 RAB3GAP1Q15042 981 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 ABCB5Q2M3G0 1257 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 BMP2KLQ5H9B9 411 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 NOL9Q5SY16 702 aaKnown RBP9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 C12orf60Q5U649 245 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 CTR9Q6PD62 1173 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 ZNF444Q8N0Y2 327 aaPredicted RBP9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 STK11IPQ8N1F8 1099 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 CTNNA3Q9UI47 895 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 ZHX2Q9Y6X8 837 aa9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 DDX60LQ5H9U9 1706 aaKnown RBP9.68□□□□□ -0.86
TM4SF1-204ENST00000493348 CCL15-CCL14A0A0B4J2E2 113 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 SPDYE5A6NIY4 337 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 USP17L5A8MUK1 530 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 PHF20L1A8MW92 1017 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 CA12O43570 354 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 HSPD1P10809 573 aaKnown RBP9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 MAP3K10Q02779 954 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 CCL15Q16663 113 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 SBK1Q52WX2 424 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 DNAJC5GQ8N7S2 189 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 CCDC17Q96LX7 622 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 FEZ1Q99689 392 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 TMOD4Q9NZQ9 345 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 SNCAIPQ9Y6H5 919 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 SIPA1L1O43166 1804 aa9.67□□□□□ -0.86
TM4SF1-204ENST00000493348 TRIM75PA6NK02 468 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 FAM155AB1AL88 458 aaPredicted RBP9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 CXCL11O14625 94 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 ZNF213O14771 459 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 CDC45O75419 566 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 GH2P01242 217 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 CYP2D6P10635 497 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 PTPRAP18433 802 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 CHMLP26374 656 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 CDK8P49336 464 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 PPARAQ07869 468 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 PABPC4Q13310 644 aaKnown RBP eCLIP9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 IMMTQ16891 758 aaKnown RBP9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 PPP4R3BQ5MIZ7 849 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 GADL1Q6ZQY3 521 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 C16orf86Q6ZW13 317 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 FASTKD5Q7L8L6 764 aaKnown RBP9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 METTL16Q86W50 562 aaKnown RBP9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 DYNLL2Q96FJ2 89 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 RNF41Q9H4P4 317 aaPredicted RBP9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 SH2D4AQ9H788 454 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 ARHGEF10LQ9HCE6 1279 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 ZBTB21Q9ULJ3 1066 aa9.66□□□□□ -0.86
TM4SF1-204ENST00000493348 CYP2D7A0A087X1C5 515 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 IRF6O14896 467 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 TSPY3P0CV98 308 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 TSPY8P0CW00 308 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 ATXN8OSP0DMR3 200 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 USP14P54578 494 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 ATP2B2Q01814 1243 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 ALX1Q15699 326 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 TATDN1Q6P1N9 297 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 MFSD6Q6ZSS7 791 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 TMEM179Q6ZVK1 233 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 ZNF589Q86UQ0 364 aaPredicted RBP9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 JMYQ8N9B5 988 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 ZNF280CQ8ND82 737 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 DSCC1Q9BVC3 393 aa9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 EPB41L4AQ9HCS5 686 aaPredicted RBP9.65□□□□□ -0.86
TM4SF1-204ENST00000493348 THSD7BQ9C0I4 1608 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 ZMYM6O95789 1325 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 TSPY2A6NKD2 308 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 USP17L10C9JJH3 530 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 RAD21O60216 631 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 RANBP6O60518 1105 aaKnown RBP9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 TRPA1O75762 1119 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 FGAP02671 866 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 HSPA1AP0DMV8 641 aaKnown RBP9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 HSPA1BP0DMV9 641 aaKnown RBP9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 SLURP2P0DP57 97 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 SHMT1P34896 483 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 CTDSPL2Q05D32 466 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 TRDNQ13061 729 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 SPP2Q13103 211 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 RRP12Q5JTH9 1297 aaKnown RBP9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 VPS53Q5VIR6 699 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 SKAP1Q86WV1 359 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 DNAJC18Q9H819 358 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 ANO2Q9NQ90 1003 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 MYH4Q9Y623 1939 aa9.64□□□□□ -0.87
TM4SF1-204ENST00000493348 ROBO3Q96MS0 1386 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 PHIPQ8WWQ0 1821 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 PTPRFP10586 1907 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 C19orf81C9J6K1 198 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 SGSM2O43147 1006 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 PRDM1O75626 825 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms