RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 CEP57L1Q8IYX8 460 aa20.8■□□□□ 0.92
EXD3-212ENST00000491734 ALG1Q9BT22 464 aa20.8■□□□□ 0.92
EXD3-212ENST00000491734 GOLPH3LQ9H4A5 285 aa20.8■□□□□ 0.92
EXD3-212ENST00000491734 RNF41Q9H4P4 317 aaPredicted RBP20.8■□□□□ 0.92
EXD3-212ENST00000491734 AATFQ9NY61 560 aaKnown RBP eCLIP20.8■□□□□ 0.926e-7■■■■□ 26.1
EXD3-212ENST00000491734 PODXL2Q9NZ53 605 aa20.8■□□□□ 0.92
EXD3-212ENST00000491734 ANAPC4Q9UJX5 808 aa20.8■□□□□ 0.92
EXD3-212ENST00000491734 KINO60870 393 aaKnown RBP20.79■□□□□ 0.92
EXD3-212ENST00000491734 WTAPQ15007 396 aa20.79■□□□□ 0.92
EXD3-212ENST00000491734 RPGRQ92834 1020 aaKnown RBP20.79■□□□□ 0.92
EXD3-212ENST00000491734 BPIFA3Q9BQP9 254 aa20.79■□□□□ 0.92
EXD3-212ENST00000491734 BRIP1Q9BX63 1249 aa20.79■□□□□ 0.92
EXD3-212ENST00000491734 KLRG2A4D1S0 409 aaPredicted RBP20.78■□□□□ 0.92
EXD3-212ENST00000491734 IGSF3O75054 1194 aa20.78■□□□□ 0.92
EXD3-212ENST00000491734 CDKL5O76039 1030 aa20.78■□□□□ 0.92
EXD3-212ENST00000491734 GPSM2P81274 684 aa20.78■□□□□ 0.92
EXD3-212ENST00000491734 CTR9Q6PD62 1173 aa20.78■□□□□ 0.92
EXD3-212ENST00000491734 FBXO38Q6PIJ6 1188 aa20.78■□□□□ 0.92
EXD3-212ENST00000491734 COL23A1Q86Y22 540 aaPredicted RBP20.78■□□□□ 0.92
EXD3-212ENST00000491734 LEMD3Q9Y2U8 911 aa20.78■□□□□ 0.92
EXD3-212ENST00000491734 ANKRD31Q8N7Z5 1873 aa20.78■□□□□ 0.92
EXD3-212ENST00000491734 PSDA5PKW4 1024 aaPredicted RBP20.78■□□□□ 0.92
EXD3-212ENST00000491734 PRDM1O75626 825 aa20.78■□□□□ 0.92
EXD3-212ENST00000491734 KIF23Q02241 960 aaPredicted RBP20.78■□□□□ 0.92
EXD3-212ENST00000491734 CPLX2Q6PUV4 134 aaKnown RBP20.78■□□□□ 0.92
EXD3-212ENST00000491734 CLIC4Q9Y696 253 aa20.78■□□□□ 0.92
EXD3-212ENST00000491734 XDHP47989 1333 aa20.77■□□□□ 0.92
EXD3-212ENST00000491734 IARSP41252 1262 aaKnown RBP20.77■□□□□ 0.92
EXD3-212ENST00000491734 USP17L12C9JPN9 530 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 USP17L21D6R901 530 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 SART3Q15020 963 aaKnown RBP20.76■□□□□ 0.91
EXD3-212ENST00000491734 SYNE3Q6ZMZ3 975 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 CCDC150Q8NCX0 1101 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 SLC26A6Q9BXS9 759 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 ERICH2A1L162 156 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 CCDC66A2RUB6 948 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 HOXA10P31260 410 aaPredicted RBP20.76■□□□□ 0.91
EXD3-212ENST00000491734 GRIK5Q16478 980 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 KRT40Q6A162 431 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 FILIP1Q7Z7B0 1213 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 NBPF11Q86T75 865 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 NLGN1Q8N2Q7 840 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 FLAD1Q8NFF5 587 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 ESR2Q92731 530 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 RTEL1Q9NZ71 1219 aa20.76■□□□□ 0.91
EXD3-212ENST00000491734 CHD4Q14839 1912 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 H2AFXP16104 143 aaPredicted RBP20.75■□□□□ 0.91
EXD3-212ENST00000491734 MYSM1Q5VVJ2 828 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 CMTR1Q8N1G2 835 aaKnown RBP20.75■□□□□ 0.91
EXD3-212ENST00000491734 RBM17Q96I25 401 aaKnown RBP20.75■□□□□ 0.91
EXD3-212ENST00000491734 UBAC1Q9BSL1 405 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 TNKSO95271 1327 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 A0A1W2PQ27 194 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 A0A1W2PQ64 194 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 A0A1W2PQD8 194 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 CYP2D6P10635 497 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 ME1P48163 572 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 SEC23AQ15436 765 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 ELF2Q15723 593 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 CCDC93Q567U6 631 aa20.75■□□□□ 0.91
EXD3-212ENST00000491734 DZIP1Q86YF9 867 aaKnown RBP20.75■□□□□ 0.91
EXD3-212ENST00000491734 FMR1NBQ8N0W7 255 aaPredicted RBP20.75■□□□□ 0.91
EXD3-212ENST00000491734 DCP1AQ9NPI6 582 aaPredicted RBP20.75■□□□□ 0.91
EXD3-212ENST00000491734 LRRC37AA6NMS7 1700 aa20.74■□□□□ 0.91
EXD3-212ENST00000491734 GUCY1A2P33402 732 aa20.74■□□□□ 0.91
EXD3-212ENST00000491734 SSRP1Q08945 709 aaKnown RBP20.74■□□□□ 0.91
EXD3-212ENST00000491734 RTN1Q16799 776 aa20.74■□□□□ 0.91
EXD3-212ENST00000491734 CCDC82Q8N4S0 544 aa20.74■□□□□ 0.91
EXD3-212ENST00000491734 NUP133Q8WUM0 1156 aa20.74■□□□□ 0.91
EXD3-212ENST00000491734 CRNKL1Q9BZJ0 848 aaKnown RBP20.74■□□□□ 0.91
EXD3-212ENST00000491734 PCDHA7Q9UN72 937 aa20.74■□□□□ 0.91
EXD3-212ENST00000491734 BRAPQ7Z569 592 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 AOPEPQ8N6M6 819 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 FSIP1Q8NA03 581 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 LINC00301Q8NCQ3 95 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 MAST2Q6P0Q8 1798 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 CCDC88AQ3V6T2 1871 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 UFL1O94874 794 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 FMNL1O95466 1100 aaPredicted RBP20.73■□□□□ 0.91
EXD3-212ENST00000491734 E4F1Q66K89 784 aaPredicted RBP20.73■□□□□ 0.91
EXD3-212ENST00000491734 C15orf52Q6ZUT6 534 aaKnown RBP20.73■□□□□ 0.91
EXD3-212ENST00000491734 MRPS27Q92552 414 aaKnown RBP20.73■□□□□ 0.91
EXD3-212ENST00000491734 CRAMP1Q96RY5 1269 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 MTA3Q9BTC8 594 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 NID2Q14112 1375 aa20.73■□□□□ 0.91
EXD3-212ENST00000491734 BBOX1O75936 387 aa20.72■□□□□ 0.91
EXD3-212ENST00000491734 IFNAR1P17181 557 aa20.72■□□□□ 0.91
EXD3-212ENST00000491734 BMS1Q14692 1282 aaKnown RBP20.72■□□□□ 0.91
EXD3-212ENST00000491734 SLC4A8Q2Y0W8 1093 aa20.72■□□□□ 0.91
EXD3-212ENST00000491734 SPTY2D1Q68D10 685 aaPredicted RBP20.72■□□□□ 0.91
EXD3-212ENST00000491734 ADALQ6DHV7 355 aa20.72■□□□□ 0.91
EXD3-212ENST00000491734 TMTC2Q8N394 836 aa20.72■□□□□ 0.91
EXD3-212ENST00000491734 ENAHQ8N8S7 591 aaPredicted RBP20.72■□□□□ 0.91
EXD3-212ENST00000491734 ZSCAN10Q96SZ4 725 aaPredicted RBP20.72■□□□□ 0.91
EXD3-212ENST00000491734 TRMT1Q9NXH9 659 aaKnown RBP20.72■□□□□ 0.91
EXD3-212ENST00000491734 LDHBP07195 334 aaKnown RBP20.72■□□□□ 0.91
EXD3-212ENST00000491734 STK38Q15208 465 aa20.72■□□□□ 0.91
EXD3-212ENST00000491734 ZNF804AQ7Z570 1209 aa20.72■□□□□ 0.91
EXD3-212ENST00000491734 WDR66Q8TBY9 1149 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms