RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CNTNAP1P78357 1384 aa26.61■■□□□ 1.85
USF3-203ENST00000491165 DCAF8L1A6NGE4 600 aa26.61■■□□□ 1.85
USF3-203ENST00000491165 ZNF213O14771 459 aa26.61■■□□□ 1.85
USF3-203ENST00000491165 IMMTQ16891 758 aaKnown RBP26.61■■□□□ 1.85
USF3-203ENST00000491165 SH3BP5LQ7L8J4 393 aa26.61■■□□□ 1.85
USF3-203ENST00000491165 LMOD1P29536 600 aaPredicted RBP26.6■■□□□ 1.85
USF3-203ENST00000491165 PPARAQ07869 468 aa26.6■■□□□ 1.85
USF3-203ENST00000491165 CDAN1Q8IWY9 1227 aa26.6■■□□□ 1.85
USF3-203ENST00000491165 FIBPO43427 364 aa26.6■■□□□ 1.85
USF3-203ENST00000491165 PTMAP06454 111 aaKnown RBP26.6■■□□□ 1.85
USF3-203ENST00000491165 HACL1Q9UJ83 578 aa26.6■■□□□ 1.85
USF3-203ENST00000491165 DDTLA6NHG4 134 aaPredicted RBP26.59■■□□□ 1.85
USF3-203ENST00000491165 C12orf60Q5U649 245 aa26.59■■□□□ 1.85
USF3-203ENST00000491165 ADARB2Q9NS39 739 aaKnown RBP26.59■■□□□ 1.85
USF3-203ENST00000491165 ARPP21Q9UBL0 812 aaPredicted RBP26.59■■□□□ 1.85
USF3-203ENST00000491165 MTMR6Q9Y217 621 aa26.59■■□□□ 1.85
USF3-203ENST00000491165 SBK1Q52WX2 424 aa26.59■■□□□ 1.85
USF3-203ENST00000491165 E7EWF7 191 aa26.58■■□□□ 1.85
USF3-203ENST00000491165 MYO1BO43795 1136 aa26.58■■□□□ 1.85
USF3-203ENST00000491165 TSGA10IPQ3SY00 556 aa26.58■■□□□ 1.85
USF3-203ENST00000491165 RNF20Q5VTR2 975 aa26.58■■□□□ 1.85
USF3-203ENST00000491165 DYNLL2Q96FJ2 89 aa26.57■■□□□ 1.84
USF3-203ENST00000491165 ME3Q16798 604 aa26.57■■□□□ 1.84
USF3-203ENST00000491165 ANGEL2Q5VTE6 544 aaKnown RBP26.57■■□□□ 1.84
USF3-203ENST00000491165 ANAPC4Q9UJX5 808 aa26.57■■□□□ 1.84
USF3-203ENST00000491165 R3HCC1Q9Y3T6 440 aaKnown RBP26.57■■□□□ 1.84
USF3-203ENST00000491165 NEDD4P46934 1319 aa26.56■■□□□ 1.84
USF3-203ENST00000491165 PSMA5P28066 241 aa26.56■■□□□ 1.84
USF3-203ENST00000491165 TMEM39BQ9GZU3 492 aa26.56■■□□□ 1.84
USF3-203ENST00000491165 NPM3O75607 178 aaKnown RBP26.56■■□□□ 1.84
USF3-203ENST00000491165 POLR3DP05423 398 aaPredicted RBP26.56■■□□□ 1.84
USF3-203ENST00000491165 EPHX2P34913 555 aa26.56■■□□□ 1.84
USF3-203ENST00000491165 ST3GAL1Q11201 340 aa26.56■■□□□ 1.84
USF3-203ENST00000491165 GGA3Q9NZ52 723 aa26.56■■□□□ 1.84
USF3-203ENST00000491165 TMOD2Q9NZR1 351 aa26.56■■□□□ 1.84
USF3-203ENST00000491165 SLC44A5Q8NCS7 719 aa26.55■■□□□ 1.84
USF3-203ENST00000491165 ENTPD3O75355 529 aa26.54■■□□□ 1.84
USF3-203ENST00000491165 DNM1Q05193 864 aaKnown RBP26.54■■□□□ 1.84
USF3-203ENST00000491165 TAF1DQ9H5J8 278 aaPredicted RBP26.54■■□□□ 1.84
USF3-203ENST00000491165 PRDM1O75626 825 aa26.54■■□□□ 1.84
USF3-203ENST00000491165 PDIA4P13667 645 aaKnown RBP26.54■■□□□ 1.84
USF3-203ENST00000491165 TPRNQ4KMQ1 711 aa26.54■■□□□ 1.84
USF3-203ENST00000491165 PGAP2Q9UHJ9 254 aa26.54■■□□□ 1.84
USF3-203ENST00000491165 ATRNL1Q5VV63 1379 aa26.53■■□□□ 1.84
USF3-203ENST00000491165 ROBO3Q96MS0 1386 aa26.53■■□□□ 1.84
USF3-203ENST00000491165 VPS37CA5D8V6 355 aaPredicted RBP26.53■■□□□ 1.84
USF3-203ENST00000491165 AKNAD1Q5T1N1 836 aa26.53■■□□□ 1.84
USF3-203ENST00000491165 FKBP1CQ5VVH2 108 aa26.53■■□□□ 1.84
USF3-203ENST00000491165 TPCN1Q9ULQ1 816 aa26.53■■□□□ 1.84
USF3-203ENST00000491165 POTEIP0CG38 1075 aa26.53■■□□□ 1.84
USF3-203ENST00000491165 POTEJP0CG39 1038 aa26.53■■□□□ 1.84
USF3-203ENST00000491165 RASA3Q14644 834 aa26.53■■□□□ 1.84
USF3-203ENST00000491165 ZNF526Q8TF50 670 aaPredicted RBP26.53■■□□□ 1.84
USF3-203ENST00000491165 STAG1Q8WVM7 1258 aa26.53■■□□□ 1.84
USF3-203ENST00000491165 DLK2Q6UY11 383 aa26.52■■□□□ 1.84
USF3-203ENST00000491165 ZSCAN29Q8IWY8 852 aaPredicted RBP26.52■■□□□ 1.84
USF3-203ENST00000491165 NECAB1Q8N987 351 aa26.52■■□□□ 1.84
USF3-203ENST00000491165 FAM151AQ8WW52 585 aa26.52■■□□□ 1.84
USF3-203ENST00000491165 TCEANC2Q96MN5 208 aa26.52■■□□□ 1.84
USF3-203ENST00000491165 DNAJC18Q9H819 358 aa26.52■■□□□ 1.84
USF3-203ENST00000491165 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.52■■□□□ 1.84
USF3-203ENST00000491165 FAM196BA6NMK8 535 aa26.51■■□□□ 1.84
USF3-203ENST00000491165 FAM83AQ86UY5 434 aa26.51■■□□□ 1.84
USF3-203ENST00000491165 USP25Q9UHP3 1055 aa26.51■■□□□ 1.84
USF3-203ENST00000491165 MYH8P13535 1937 aa26.51■■□□□ 1.83
USF3-203ENST00000491165 GABPAQ06546 454 aa26.51■■□□□ 1.83
USF3-203ENST00000491165 ANKRD1Q15327 319 aa26.51■■□□□ 1.83
USF3-203ENST00000491165 TEPSINQ96N21 525 aa26.51■■□□□ 1.83
USF3-203ENST00000491165 NEK1Q96PY6 1258 aa26.51■■□□□ 1.83
USF3-203ENST00000491165 RRAGCQ9HB90 399 aa26.51■■□□□ 1.83
USF3-203ENST00000491165 COL2A1P02458 1487 aaPredicted RBP26.5■■□□□ 1.83
USF3-203ENST00000491165 B4E1Z4 1266 aa26.5■■□□□ 1.83
USF3-203ENST00000491165 BLOC1S2Q6QNY1 142 aa26.5■■□□□ 1.83
USF3-203ENST00000491165 CHST3Q7LGC8 479 aa26.5■■□□□ 1.83
USF3-203ENST00000491165 DEFB129Q9H1M3 183 aa26.5■■□□□ 1.83
USF3-203ENST00000491165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.5■■□□□ 1.83
USF3-203ENST00000491165 IQCA1LA6NCM1 817 aa26.5■■□□□ 1.83
USF3-203ENST00000491165 FGRP09769 529 aa26.5■■□□□ 1.83
USF3-203ENST00000491165 PRAMEF18Q5VWM3 479 aa26.5■■□□□ 1.83
USF3-203ENST00000491165 MFSD6Q6ZSS7 791 aa26.5■■□□□ 1.83
USF3-203ENST00000491165 USP50Q70EL3 339 aaPredicted RBP26.5■■□□□ 1.83
USF3-203ENST00000491165 CSRNP1Q96S65 589 aa26.5■■□□□ 1.83
USF3-203ENST00000491165 NMRK2Q9NPI5 230 aa26.5■■□□□ 1.83
USF3-203ENST00000491165 LARP1BQ659C4 914 aaKnown RBP26.49■■□□□ 1.83
USF3-203ENST00000491165 DHX36Q9H2U1 1008 aaKnown RBP26.49■■□□□ 1.83
USF3-203ENST00000491165 DTNBO60941 627 aa26.48■■□□□ 1.83
USF3-203ENST00000491165 PDCP20941 246 aa26.48■■□□□ 1.83
USF3-203ENST00000491165 EAPPQ56P03 285 aaPredicted RBP26.48■■□□□ 1.83
USF3-203ENST00000491165 RRP12Q5JTH9 1297 aaKnown RBP26.48■■□□□ 1.83
USF3-203ENST00000491165 C16orf86Q6ZW13 317 aa26.48■■□□□ 1.83
USF3-203ENST00000491165 TTC6Q86TZ1 520 aa26.48■■□□□ 1.83
USF3-203ENST00000491165 AMOTL1Q8IY63 956 aa26.48■■□□□ 1.83
USF3-203ENST00000491165 MB21D2Q8IYB1 491 aaPredicted RBP26.48■■□□□ 1.83
USF3-203ENST00000491165 FUCA2Q9BTY2 467 aa26.48■■□□□ 1.83
USF3-203ENST00000491165 ALDH8A1Q9H2A2 487 aaPredicted RBP26.48■■□□□ 1.83
USF3-203ENST00000491165 SERPINB13Q9UIV8 391 aa26.48■■□□□ 1.83
USF3-203ENST00000491165 KRT32Q14532 448 aa26.48■■□□□ 1.83
USF3-203ENST00000491165 GLIPR1L2Q4G1C9 344 aa26.48■■□□□ 1.83
USF3-203ENST00000491165 ADCY5O95622 1261 aa26.47■■□□□ 1.83
USF3-203ENST00000491165 RPS6KB1P23443 525 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms