RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 OSBPP22059 807 aa12.55□□□□□ -0.4
RBM39-236ENST00000490484 FCGRTP55899 365 aa12.55□□□□□ -0.4
RBM39-236ENST00000490484 SERPINB13Q9UIV8 391 aa12.55□□□□□ -0.4
RBM39-236ENST00000490484 PNMA3Q9UL41 463 aa12.55□□□□□ -0.4
RBM39-236ENST00000490484 TCRBV5S4A2TA0A5A2 114 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 PRMT2P55345 433 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 RRP1P56182 461 aaKnown RBP12.54□□□□□ -0.4
RBM39-236ENST00000490484 PRKCZQ05513 592 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 SLFNL1Q499Z3 407 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 LCORLQ8N3X6 602 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 ANKRD13CQ8N6S4 541 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 RAET1EQ8TD07 263 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 SDR42E1Q8WUS8 393 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 HAUS7Q99871 368 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 CRNKL1Q9BZJ0 848 aaKnown RBP12.54□□□□□ -0.4
RBM39-236ENST00000490484 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.54□□□□□ -0.41e-13■■□□□ 12.6
RBM39-236ENST00000490484 EHD4Q9H223 541 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 SRRDQ9UH36 339 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 MYH7P12883 1935 aa12.54□□□□□ -0.4
RBM39-236ENST00000490484 KIAA0100Q14667 2235 aaKnown RBP12.54□□□□□ -0.4
RBM39-236ENST00000490484 MBD4O95243 580 aa12.53□□□□□ -0.4
RBM39-236ENST00000490484 GH2P01242 217 aa12.53□□□□□ -0.4
RBM39-236ENST00000490484 CHGBP05060 677 aa12.53□□□□□ -0.4
RBM39-236ENST00000490484 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
RBM39-236ENST00000490484 HOXD10P28358 340 aa12.53□□□□□ -0.4
RBM39-236ENST00000490484 TTC6Q86TZ1 520 aa12.53□□□□□ -0.4
RBM39-236ENST00000490484 WDR18Q9BV38 432 aa12.53□□□□□ -0.4
RBM39-236ENST00000490484 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
RBM39-236ENST00000490484 ARMT1Q9H993 441 aa12.53□□□□□ -0.4
RBM39-236ENST00000490484 TMOD4Q9NZQ9 345 aa12.53□□□□□ -0.4
RBM39-236ENST00000490484 TNPO2O14787 897 aaKnown RBP12.52□□□□□ -0.41
RBM39-236ENST00000490484 ADD2P35612 726 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 PLCD1P51178 756 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 BACE1P56817 501 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 IRX3P78415 501 aaPredicted RBP12.52□□□□□ -0.41
RBM39-236ENST00000490484 EVX2Q03828 476 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 PABPC4Q13310 644 aaKnown RBP eCLIP12.52□□□□□ -0.41
RBM39-236ENST00000490484 FAM110CQ1W6H9 321 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 SH3D19Q5HYK7 790 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 TSHZ3Q63HK5 1081 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 TATDN1Q6P1N9 297 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 FEZ1Q99689 392 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 ASCC2Q9H1I8 757 aaPredicted RBP12.52□□□□□ -0.41
RBM39-236ENST00000490484 ECHDC1Q9NTX5 307 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 GINM1Q9NU53 330 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 MCM9Q9NXL9 1143 aa12.52□□□□□ -0.41
RBM39-236ENST00000490484 USP17L10C9JJH3 530 aa12.51□□□□□ -0.41
RBM39-236ENST00000490484 EN2P19622 333 aaPredicted RBP12.51□□□□□ -0.41
RBM39-236ENST00000490484 SHMT1P34896 483 aa12.51□□□□□ -0.41
RBM39-236ENST00000490484 RAB3GAP1Q15042 981 aa12.51□□□□□ -0.41
RBM39-236ENST00000490484 ZYXQ15942 572 aaKnown RBP12.51□□□□□ -0.41
RBM39-236ENST00000490484 ABCB5Q2M3G0 1257 aa12.51□□□□□ -0.41
RBM39-236ENST00000490484 CERKLQ49MI3 558 aaPredicted RBP12.51□□□□□ -0.41
RBM39-236ENST00000490484 GPATCH3Q96I76 525 aa12.51□□□□□ -0.41
RBM39-236ENST00000490484 DCTPP1Q9H773 170 aa12.51□□□□□ -0.41
RBM39-236ENST00000490484 DCP1AQ9NPI6 582 aaPredicted RBP12.51□□□□□ -0.41
RBM39-236ENST00000490484 GABRQQ9UN88 632 aa12.51□□□□□ -0.41
RBM39-236ENST00000490484 PCDHB15Q9Y5E8 787 aa12.51□□□□□ -0.41
RBM39-236ENST00000490484 C19orf81C9J6K1 198 aa12.5□□□□□ -0.41
RBM39-236ENST00000490484 PRKAB2O43741 272 aa12.5□□□□□ -0.41
RBM39-236ENST00000490484 CYP2D6P10635 497 aa12.5□□□□□ -0.41
RBM39-236ENST00000490484 GRK4P32298 578 aa12.5□□□□□ -0.41
RBM39-236ENST00000490484 GCLCP48506 637 aaPredicted RBP12.5□□□□□ -0.41
RBM39-236ENST00000490484 SLC44A5Q8NCS7 719 aa12.5□□□□□ -0.41
RBM39-236ENST00000490484 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
RBM39-236ENST00000490484 BAZ2AQ9UIF9 1905 aaKnown RBP12.5□□□□□ -0.41
RBM39-236ENST00000490484 MYH8P13535 1937 aa12.49□□□□□ -0.41
RBM39-236ENST00000490484 MPHOSPH10O00566 681 aaKnown RBP12.49□□□□□ -0.41
RBM39-236ENST00000490484 FLT3LGP49771 235 aa12.49□□□□□ -0.41
RBM39-236ENST00000490484 GABPAQ06546 454 aa12.49□□□□□ -0.41
RBM39-236ENST00000490484 UBE3CQ15386 1083 aa12.49□□□□□ -0.41
RBM39-236ENST00000490484 MTFR1Q15390 333 aa12.49□□□□□ -0.41
RBM39-236ENST00000490484 USP17L2Q6R6M4 530 aa12.49□□□□□ -0.41
RBM39-236ENST00000490484 SLAIN1Q8ND83 568 aa12.49□□□□□ -0.41
RBM39-236ENST00000490484 CRBNQ96SW2 442 aa12.49□□□□□ -0.41
RBM39-236ENST00000490484 BIN2Q9UBW5 565 aaPredicted RBP12.49□□□□□ -0.41
RBM39-236ENST00000490484 PEX10O60683 326 aa12.48□□□□□ -0.41
RBM39-236ENST00000490484 ELNP15502 786 aa12.48□□□□□ -0.41
RBM39-236ENST00000490484 HOXA7P31268 230 aaPredicted RBP12.48□□□□□ -0.41
RBM39-236ENST00000490484 HERVK_113P62684 666 aa12.48□□□□□ -0.41
RBM39-236ENST00000490484 PRPF38BQ5VTL8 546 aaKnown RBP12.48□□□□□ -0.41
RBM39-236ENST00000490484 ZSCAN25Q6NSZ9 544 aa12.48□□□□□ -0.41
RBM39-236ENST00000490484 ACER1Q8TDN7 264 aa12.48□□□□□ -0.41
RBM39-236ENST00000490484 COA7Q96BR5 231 aa12.48□□□□□ -0.41
RBM39-236ENST00000490484 DYNLL2Q96FJ2 89 aa12.48□□□□□ -0.41
RBM39-236ENST00000490484 PUS7LQ9H0K6 701 aaKnown RBP12.48□□□□□ -0.41
RBM39-236ENST00000490484 CABP5Q9NP86 173 aa12.48□□□□□ -0.41
RBM39-236ENST00000490484 EMILIN3Q9NT22 766 aa12.48□□□□□ -0.41
RBM39-236ENST00000490484 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
RBM39-236ENST00000490484 CYP2D7A0A087X1C5 515 aa12.47□□□□□ -0.41
RBM39-236ENST00000490484 ADCY3O60266 1144 aa12.47□□□□□ -0.41
RBM39-236ENST00000490484 VCAM1P19320 739 aa12.47□□□□□ -0.41
RBM39-236ENST00000490484 GUCY1A2P33402 732 aa12.47□□□□□ -0.41
RBM39-236ENST00000490484 UBXN2AP68543 259 aa12.47□□□□□ -0.41
RBM39-236ENST00000490484 SEPT2Q15019 361 aa12.47□□□□□ -0.41
RBM39-236ENST00000490484 AMOTL1Q8IY63 956 aa12.47□□□□□ -0.41
RBM39-236ENST00000490484 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
RBM39-236ENST00000490484 C12orf42Q96LP6 360 aa12.47□□□□□ -0.41
RBM39-236ENST00000490484 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms