RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 TC2NQ8N9U0 490 aa16.19■□□□□ 0.18
RER1-207ENST00000488353 HELBQ8NG08 1087 aaPredicted RBP16.19■□□□□ 0.18
RER1-207ENST00000488353 FAM71BQ8TC56 605 aa16.19■□□□□ 0.18
RER1-207ENST00000488353 ZSWIM4Q9H7M6 989 aa16.19■□□□□ 0.18
RER1-207ENST00000488353 SPEF2Q9C093 1822 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 PDE8AO60658 829 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 TUBB2AQ13885 445 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 SUSD4Q5VX71 490 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 TICAM2Q86XR7 235 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 FBXL16Q8N461 479 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 TUBB2BQ9BVA1 445 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 ANKRD36CQ5JPF3 1778 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 MCAMP43121 646 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 KCNQ4P56696 695 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 FAM98CQ17RN3 349 aaKnown RBP16.18■□□□□ 0.18
RER1-207ENST00000488353 ANO1Q5XXA6 986 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 SPECC1LQ69YQ0 1117 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 GBP3Q9H0R5 595 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 INTS13Q9NVM9 706 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 CDC23Q9UJX2 597 aa16.18■□□□□ 0.18
RER1-207ENST00000488353 MYO5AQ9Y4I1 1855 aaKnown RBP16.17■□□□□ 0.18
RER1-207ENST00000488353 UBAP1LF5GYI3 381 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 N4BP1O75113 896 aaKnown RBP16.17■□□□□ 0.18
RER1-207ENST00000488353 CCDC175P0C221 793 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 KIF23Q02241 960 aaPredicted RBP16.17■□□□□ 0.18
RER1-207ENST00000488353 PTPN21Q16825 1174 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 MYH7P12883 1935 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 SNAP23O00161 211 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 WDHD1O75717 1129 aaPredicted RBP16.17■□□□□ 0.18
RER1-207ENST00000488353 TUBBP07437 444 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 KARSQ15046 597 aaKnown RBP16.17■□□□□ 0.18
RER1-207ENST00000488353 SLC9C2Q5TAH2 1124 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 LRRC31Q6UY01 552 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 CYB5R4Q7L1T6 521 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 NBPF3Q9H094 633 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 ACBD3Q9H3P7 528 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
RER1-207ENST00000488353 TOM1O60784 492 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 IDH1O75874 414 aaKnown RBP16.16■□□□□ 0.18
RER1-207ENST00000488353 ADKP55263 362 aaKnown RBP16.16■□□□□ 0.18
RER1-207ENST00000488353 TRDNQ13061 729 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 EFCAB13Q8IY85 973 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 VGLL2Q8N8G2 317 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 PHKBQ93100 1093 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 PNKPQ96T60 521 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 MED4Q9NPJ6 270 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 INCENPQ9NQS7 918 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 PUF60Q9UHX1 559 aaKnown RBP16.16■□□□□ 0.18
RER1-207ENST00000488353 MYH3P11055 1940 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 LOC102724159A0A0B4J2E5 919 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 CASP8Q14790 479 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 PWP2Q15269 919 aaKnown RBP16.16■□□□□ 0.18
RER1-207ENST00000488353 TBC1D10CQ8IV04 446 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 SUGP1Q8IWZ8 645 aaKnown RBP16.16■□□□□ 0.18
RER1-207ENST00000488353 CCDC102AQ96A19 550 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 DRC1Q96MC2 740 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 ALG1Q9BT22 464 aa16.16■□□□□ 0.18
RER1-207ENST00000488353 MROH7-TTC4A0A0A0MT08 1334 aa16.15■□□□□ 0.18
RER1-207ENST00000488353 CPP00450 1065 aa16.15■□□□□ 0.18
RER1-207ENST00000488353 SLC39A14Q15043 492 aa16.15■□□□□ 0.18
RER1-207ENST00000488353 C8orf37Q96NL8 207 aa16.15■□□□□ 0.18
RER1-207ENST00000488353 DESI2Q9BSY9 194 aa16.15■□□□□ 0.18
RER1-207ENST00000488353 SEC31BQ9NQW1 1179 aa16.15■□□□□ 0.18
RER1-207ENST00000488353 MYH14Q7Z406 1995 aaKnown RBP16.15■□□□□ 0.18
RER1-207ENST00000488353 KIF5CO60282 957 aa16.14■□□□□ 0.18
RER1-207ENST00000488353 PPFIA4O75335 1185 aa16.14■□□□□ 0.18
RER1-207ENST00000488353 CAMTA2O94983 1202 aa16.14■□□□□ 0.18
RER1-207ENST00000488353 PNOCQ13519 176 aa16.14■□□□□ 0.18
RER1-207ENST00000488353 CNNM3Q8NE01 707 aa16.14■□□□□ 0.18
RER1-207ENST00000488353 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.18
RER1-207ENST00000488353 MRPL44Q9H9J2 332 aaKnown RBP16.14■□□□□ 0.18
RER1-207ENST00000488353 TOMM22Q9NS69 142 aa16.14■□□□□ 0.18
RER1-207ENST00000488353 HPSEQ9Y251 543 aa16.14■□□□□ 0.18
RER1-207ENST00000488353 B4E1Z4 1266 aa16.14■□□□□ 0.17
RER1-207ENST00000488353 PDE8BO95263 885 aa16.14■□□□□ 0.17
RER1-207ENST00000488353 METAP2P50579 478 aaKnown RBP eCLIP16.14■□□□□ 0.17
RER1-207ENST00000488353 SMIM5Q71RC9 77 aa16.14■□□□□ 0.17
RER1-207ENST00000488353 MICU3Q86XE3 530 aa16.14■□□□□ 0.17
RER1-207ENST00000488353 MYL10Q9BUA6 226 aa16.14■□□□□ 0.17
RER1-207ENST00000488353 IRX2Q9BZI1 471 aaPredicted RBP16.14■□□□□ 0.17
RER1-207ENST00000488353 PIH1D3Q9NQM4 214 aaKnown RBP16.14■□□□□ 0.17
RER1-207ENST00000488353 AKAP11Q9UKA4 1901 aa16.14■□□□□ 0.17
RER1-207ENST00000488353 CDC27P30260 824 aa16.13■□□□□ 0.17
RER1-207ENST00000488353 ADD2P35612 726 aa16.13■□□□□ 0.17
RER1-207ENST00000488353 PHKA1P46020 1223 aa16.13■□□□□ 0.17
RER1-207ENST00000488353 BARGINQ6ZT62 677 aa16.13■□□□□ 0.17
RER1-207ENST00000488353 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
RER1-207ENST00000488353 SUGCTQ9HAC7 445 aa16.13■□□□□ 0.17
RER1-207ENST00000488353 ANGEL1Q9UNK9 670 aaKnown RBP16.13■□□□□ 0.17
RER1-207ENST00000488353 NIP7Q9Y221 180 aaKnown RBP eCLIP16.13■□□□□ 0.17
RER1-207ENST00000488353 UBE2Q2LH0YL09 131 aa16.13■□□□□ 0.17
RER1-207ENST00000488353 MMP14P50281 582 aa16.13■□□□□ 0.17
RER1-207ENST00000488353 DNAJC21Q5F1R6 531 aaKnown RBP16.13■□□□□ 0.17
RER1-207ENST00000488353 KRT40Q6A162 431 aa16.13■□□□□ 0.17
RER1-207ENST00000488353 PTF1AQ7RTS3 328 aa16.13■□□□□ 0.17
RER1-207ENST00000488353 SWT1Q5T5J6 900 aaKnown RBP16.12■□□□□ 0.17
RER1-207ENST00000488353 WWC2Q6AWC2 1192 aa16.12■□□□□ 0.17
RER1-207ENST00000488353 VPS37DQ86XT2 251 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms