RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-208ENST00000487997 LDLRAD1Q5T700 205 aa11.5□□□□□ -0.57
PTBP3-208ENST00000487997 TSHZ3Q63HK5 1081 aa11.5□□□□□ -0.57
PTBP3-208ENST00000487997 MIGA2Q7L4E1 593 aa11.5□□□□□ -0.57
PTBP3-208ENST00000487997 ADGRA1Q86SQ6 560 aa11.5□□□□□ -0.57
PTBP3-208ENST00000487997 CHD1LQ86WJ1 897 aa11.5□□□□□ -0.57
PTBP3-208ENST00000487997 TGFBRAP1Q8WUH2 860 aa11.5□□□□□ -0.57
PTBP3-208ENST00000487997 ZDHHC16Q969W1 377 aa11.5□□□□□ -0.57
PTBP3-208ENST00000487997 ZNF532Q9HCE3 1301 aa11.5□□□□□ -0.57
PTBP3-208ENST00000487997 DOCK1Q14185 1865 aa11.5□□□□□ -0.57
PTBP3-208ENST00000487997 DPYSL4O14531 572 aa11.49□□□□□ -0.57
PTBP3-208ENST00000487997 DYNLL1P63167 89 aaKnown RBP11.49□□□□□ -0.57
PTBP3-208ENST00000487997 NUCB1Q02818 461 aa11.49□□□□□ -0.57
PTBP3-208ENST00000487997 RASAL3Q86YV0 1011 aa11.49□□□□□ -0.57
PTBP3-208ENST00000487997 ZFPM1Q8IX07 1006 aa11.49□□□□□ -0.57
PTBP3-208ENST00000487997 OTUD7AQ8TE49 926 aaPredicted RBP11.49□□□□□ -0.57
PTBP3-208ENST00000487997 WRNIP1Q96S55 665 aa11.49□□□□□ -0.57
PTBP3-208ENST00000487997 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
PTBP3-208ENST00000487997 CRNKL1Q9BZJ0 848 aaKnown RBP11.49□□□□□ -0.57
PTBP3-208ENST00000487997 OSBPL5Q9H0X9 879 aaPredicted RBP11.49□□□□□ -0.57
PTBP3-208ENST00000487997 DHX36Q9H2U1 1008 aaKnown RBP11.49□□□□□ -0.57
PTBP3-208ENST00000487997 DDX4Q9NQI0 724 aaKnown RBP11.49□□□□□ -0.57
PTBP3-208ENST00000487997 PCDHGA10Q9Y5H3 936 aa11.49□□□□□ -0.57
PTBP3-208ENST00000487997 FAM155AB1AL88 458 aaPredicted RBP11.48□□□□□ -0.57
PTBP3-208ENST00000487997 ZFYP08048 801 aaPredicted RBP11.48□□□□□ -0.57
PTBP3-208ENST00000487997 HSPA1AP0DMV8 641 aaKnown RBP11.48□□□□□ -0.57
PTBP3-208ENST00000487997 HSPA1BP0DMV9 641 aaKnown RBP11.48□□□□□ -0.57
PTBP3-208ENST00000487997 ADD2P35612 726 aa11.48□□□□□ -0.57
PTBP3-208ENST00000487997 PDE1AP54750 535 aa11.48□□□□□ -0.57
PTBP3-208ENST00000487997 KIF23Q02241 960 aaPredicted RBP11.48□□□□□ -0.57
PTBP3-208ENST00000487997 MAPKAPK5Q8IW41 473 aa11.48□□□□□ -0.57
PTBP3-208ENST00000487997 KBTBD3Q8NAB2 608 aa11.48□□□□□ -0.57
PTBP3-208ENST00000487997 PI4K2BQ8TCG2 481 aa11.48□□□□□ -0.57
PTBP3-208ENST00000487997 CLMNQ96JQ2 1002 aa11.48□□□□□ -0.57
PTBP3-208ENST00000487997 ELP3Q9H9T3 547 aa11.48□□□□□ -0.57
PTBP3-208ENST00000487997 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
PTBP3-208ENST00000487997 RFX7Q2KHR2 1363 aa11.48□□□□□ -0.57
PTBP3-208ENST00000487997 COL2A1P02458 1487 aaPredicted RBP11.48□□□□□ -0.57
PTBP3-208ENST00000487997 ATRNL1Q5VV63 1379 aa11.47□□□□□ -0.57
PTBP3-208ENST00000487997 FLT1P17948 1338 aa11.47□□□□□ -0.57
PTBP3-208ENST00000487997 DDTLA6NHG4 134 aaPredicted RBP11.47□□□□□ -0.57
PTBP3-208ENST00000487997 HLA-DOAP06340 250 aa11.47□□□□□ -0.57
PTBP3-208ENST00000487997 ZBTB48P10074 688 aaPredicted RBP11.47□□□□□ -0.57
PTBP3-208ENST00000487997 PTPREP23469 700 aa11.47□□□□□ -0.57
PTBP3-208ENST00000487997 UBE3CQ15386 1083 aa11.47□□□□□ -0.57
PTBP3-208ENST00000487997 CRACR2BQ8N4Y2 399 aaPredicted RBP11.47□□□□□ -0.57
PTBP3-208ENST00000487997 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTBP3-208ENST00000487997 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
PTBP3-208ENST00000487997 FSD1Q9BTV5 496 aa11.47□□□□□ -0.57
PTBP3-208ENST00000487997 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.47□□□□□ -0.574e-6■■■□□ 17.1
PTBP3-208ENST00000487997 PI4KBQ9UBF8 816 aa11.47□□□□□ -0.57
PTBP3-208ENST00000487997 STAP2Q9UGK3 403 aa11.47□□□□□ -0.57
PTBP3-208ENST00000487997 SIPA1L1O43166 1804 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 TCRBV5S4A2TA0A5A2 114 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 TRIM6-TRIM34B2RNG4 842 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 SREBF2Q12772 1141 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 VGLL4Q14135 290 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.46□□□□□ -0.57
PTBP3-208ENST00000487997 SH3BP5LQ7L8J4 393 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 AMOTL1Q8IY63 956 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 ZKSCAN4Q969J2 545 aaPredicted RBP11.46□□□□□ -0.57
PTBP3-208ENST00000487997 EVI5LQ96CN4 794 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 OPTNQ96CV9 577 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 WNK4Q96J92 1243 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 RIOK1Q9BRS2 568 aaKnown RBP11.46□□□□□ -0.57
PTBP3-208ENST00000487997 WBP1LQ9NX94 342 aa11.46□□□□□ -0.57
PTBP3-208ENST00000487997 SAP30BPQ9UHR5 308 aaKnown RBP11.46□□□□□ -0.57
PTBP3-208ENST00000487997 HERC5Q9UII4 1024 aaKnown RBP11.46□□□□□ -0.57
PTBP3-208ENST00000487997 SALL3Q9BXA9 1300 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 PHIPQ8WWQ0 1821 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 MANSC4A6NHS7 340 aaPredicted RBP11.45□□□□□ -0.58
PTBP3-208ENST00000487997 RNF113AO15541 343 aaKnown RBP11.45□□□□□ -0.58
PTBP3-208ENST00000487997 CA12O43570 354 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 MBD4O95243 580 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 POLR3DP05423 398 aaPredicted RBP11.45□□□□□ -0.58
PTBP3-208ENST00000487997 INHBEP58166 350 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 TTC6Q86TZ1 520 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 ERO1BQ86YB8 467 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 FOXP4Q8IVH2 680 aaPredicted RBP11.45□□□□□ -0.58
PTBP3-208ENST00000487997 APPBP2Q92624 585 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 ZIC5Q96T25 663 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 ZBED2Q9BTP6 218 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 ARMT1Q9H993 441 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 PICK1Q9NRD5 415 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 PALD1Q9ULE6 856 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 PTPRFP10586 1907 aa11.45□□□□□ -0.58
PTBP3-208ENST00000487997 DDX60LQ5H9U9 1706 aaKnown RBP11.44□□□□□ -0.58
PTBP3-208ENST00000487997 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
PTBP3-208ENST00000487997 INPP5BP32019 993 aa11.44□□□□□ -0.58
PTBP3-208ENST00000487997 CTCFP49711 727 aaPredicted RBP11.44□□□□□ -0.58
PTBP3-208ENST00000487997 SLC4A8Q2Y0W8 1093 aa11.44□□□□□ -0.58
PTBP3-208ENST00000487997 SLFNL1Q499Z3 407 aa11.44□□□□□ -0.58
PTBP3-208ENST00000487997 OTUD7BQ6GQQ9 843 aa11.44□□□□□ -0.58
PTBP3-208ENST00000487997 PLEKHM2Q8IWE5 1019 aa11.44□□□□□ -0.58
PTBP3-208ENST00000487997 LCORLQ8N3X6 602 aa11.44□□□□□ -0.58
PTBP3-208ENST00000487997 RILPL2Q969X0 211 aa11.44□□□□□ -0.58
PTBP3-208ENST00000487997 SLC4A5Q9BY07 1137 aa11.44□□□□□ -0.58
PTBP3-208ENST00000487997 ATP8A2Q9NTI2 1148 aa11.44□□□□□ -0.58
PTBP3-208ENST00000487997 MCM9Q9NXL9 1143 aa11.44□□□□□ -0.58
PTBP3-208ENST00000487997 ZNF112Q9UJU3 913 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms