RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 GOLIM4O00461 696 aa13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 ASNSP08243 561 aa13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 IFIT2P09913 472 aaKnown RBP13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 EN2P19622 333 aaPredicted RBP13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 PRKCZQ05513 592 aa13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 CRACR2BQ8N4Y2 399 aaPredicted RBP13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 SMCR8Q8TEV9 937 aaPredicted RBP13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 DNAJC2Q99543 621 aaKnown RBP13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 WDR18Q9BV38 432 aa13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 CEP290O15078 2479 aa13.64□□□□□ -0.23
RAB11FIP3-210ENST00000487899 FMNL1O95466 1100 aaPredicted RBP13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 HLA-DOAP06340 250 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 USP5P45974 858 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 FCGRTP55899 365 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 TTF1Q15361 905 aaPredicted RBP13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 FAM110CQ1W6H9 321 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 TATDN1Q6P1N9 297 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 ANKRD13CQ8N6S4 541 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 SHISA4Q96DD7 197 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 AS3MTQ9HBK9 375 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 GABRQQ9UN88 632 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 ZNF532Q9HCE3 1301 aa13.63□□□□□ -0.23
RAB11FIP3-210ENST00000487899 MYCP01106 439 aaPredicted RBP13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 CHGBP05060 677 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 SHMT1P34896 483 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 BACE1P56817 501 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 MTFR1Q15390 333 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 SLFNL1Q499Z3 407 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 NBPF11Q86T75 865 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 FOXP4Q8IVH2 680 aaPredicted RBP13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 LCORLQ8N3X6 602 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 HAUS7Q99871 368 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 ASCC2Q9H1I8 757 aaPredicted RBP13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 CHMP4BQ9H444 224 aaKnown RBP13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 PAG1Q9NWQ8 432 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
RAB11FIP3-210ENST00000487899 MAGEB6P1A0A0J9YX57 407 aa13.61□□□□□ -0.23
RAB11FIP3-210ENST00000487899 SMARCA5O60264 1052 aaPredicted RBP13.61□□□□□ -0.23
RAB11FIP3-210ENST00000487899 GH2P01242 217 aa13.61□□□□□ -0.23
RAB11FIP3-210ENST00000487899 ATP5JP18859 108 aa13.61□□□□□ -0.23
RAB11FIP3-210ENST00000487899 GRK4P32298 578 aa13.61□□□□□ -0.23
RAB11FIP3-210ENST00000487899 GABPAQ06546 454 aa13.61□□□□□ -0.23
RAB11FIP3-210ENST00000487899 RAET1EQ8TD07 263 aa13.61□□□□□ -0.23
RAB11FIP3-210ENST00000487899 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
RAB11FIP3-210ENST00000487899 GINM1Q9NU53 330 aa13.61□□□□□ -0.23
RAB11FIP3-210ENST00000487899 PLXNA1Q9UIW2 1896 aa13.61□□□□□ -0.23
RAB11FIP3-210ENST00000487899 TNPO2O14787 897 aaKnown RBP13.6□□□□□ -0.23
RAB11FIP3-210ENST00000487899 ADD2P35612 726 aa13.6□□□□□ -0.23
RAB11FIP3-210ENST00000487899 PLCD1P51178 756 aa13.6□□□□□ -0.23
RAB11FIP3-210ENST00000487899 SDR42E1Q8WUS8 393 aa13.6□□□□□ -0.23
RAB11FIP3-210ENST00000487899 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
RAB11FIP3-210ENST00000487899 BCL11AQ9H165 835 aa13.6□□□□□ -0.23
RAB11FIP3-210ENST00000487899 BOLA2Q9H3K6 86 aa13.6□□□□□ -0.23
RAB11FIP3-210ENST00000487899 PEX10O60683 326 aa13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 HOXD10P28358 340 aa13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 GCLCP48506 637 aaPredicted RBP13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 FLT3LGP49771 235 aa13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 PABPC4Q13310 644 aaKnown RBP eCLIP13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 POTEEQ6S8J3 1075 aa13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 C12orf42Q96LP6 360 aa13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 TMEM106CQ9BVX2 250 aa13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 CRNKL1Q9BZJ0 848 aaKnown RBP13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 DCP1AQ9NPI6 582 aaPredicted RBP13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 MORF4L1Q9UBU8 362 aa13.59□□□□□ -0.23
RAB11FIP3-210ENST00000487899 USP17L10C9JJH3 530 aa13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 SMIM22K7EJ46 135 aa13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 MBD4O95243 580 aa13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 CYP2D6P10635 497 aa13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ELNP15502 786 aa13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 HOXA7P31268 230 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 IRF5Q13568 498 aa13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 TTC6Q86TZ1 520 aa13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ARMT1Q9H993 441 aa13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 TXNRD2Q9NNW7 524 aa13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ZNFX1Q9P2E3 1918 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP3-210ENST00000487899 LAMA4Q16363 1823 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 C19orf81C9J6K1 198 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 PRKAB2O43741 272 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ADCY3O60266 1144 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 INHAP05111 366 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 CCL5P13501 91 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 RRP1P56182 461 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 HERVK_113P62684 666 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 IRX3P78415 501 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 TSHZ3Q63HK5 1081 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 UBE2Q1Q7Z7E8 422 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 SLC44A5Q8NCS7 719 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ACER1Q8TDN7 264 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 MCM9Q9NXL9 1143 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 TMOD4Q9NZQ9 345 aa13.57□□□□□ -0.24
RAB11FIP3-210ENST00000487899 SZT2Q5T011 3432 aa13.56□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ZYXQ15942 572 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ABCB5Q2M3G0 1257 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms