RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CAP2P40123 477 aa8.07□□□□□ -1.12
SMC4-219ENST00000487747 LIG3P49916 1009 aa8.07□□□□□ -1.12
SMC4-219ENST00000487747 CLCN7P51798 805 aa8.07□□□□□ -1.12
SMC4-219ENST00000487747 RPS26P62854 115 aaKnown RBP8.07□□□□□ -1.12
SMC4-219ENST00000487747 JAG1P78504 1218 aa8.07□□□□□ -1.12
SMC4-219ENST00000487747 ZNF124Q15973 351 aa8.07□□□□□ -1.12
SMC4-219ENST00000487747 LETMD1Q6P1Q0 360 aa8.07□□□□□ -1.12
SMC4-219ENST00000487747 HID1Q8IV36 788 aa8.07□□□□□ -1.12
SMC4-219ENST00000487747 DPH2Q9BQC3 489 aaPredicted RBP8.07□□□□□ -1.12
SMC4-219ENST00000487747 TLR6Q9Y2C9 796 aa8.07□□□□□ -1.12
SMC4-219ENST00000487747 EAPPQ56P03 285 aaPredicted RBP8.06□□□□□ -1.12
SMC4-219ENST00000487747 SFRP5Q5T4F7 317 aa8.06□□□□□ -1.12
SMC4-219ENST00000487747 FYB2Q5VWT5 728 aa8.06□□□□□ -1.12
SMC4-219ENST00000487747 FLAD1Q8NFF5 587 aa8.06□□□□□ -1.12
SMC4-219ENST00000487747 CARS2Q9HA77 564 aaKnown RBP8.06□□□□□ -1.12
SMC4-219ENST00000487747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.06□□□□□ -1.122e-7■■■■□ 26.2
SMC4-219ENST00000487747 TJP2Q9UDY2 1190 aa8.06□□□□□ -1.12
SMC4-219ENST00000487747 PARP2Q9UGN5 583 aa8.06□□□□□ -1.12
SMC4-219ENST00000487747 CAPN6Q9Y6Q1 641 aa8.06□□□□□ -1.12
SMC4-219ENST00000487747 FAM155AB1AL88 458 aaPredicted RBP8.05□□□□□ -1.12
SMC4-219ENST00000487747 CBX7O95931 251 aa8.05□□□□□ -1.12
SMC4-219ENST00000487747 CST3P01034 146 aaPredicted RBP8.05□□□□□ -1.12
SMC4-219ENST00000487747 ZNF865P0CJ78 1059 aaPredicted RBP8.05□□□□□ -1.12
SMC4-219ENST00000487747 SND1Q7KZF4 910 aaKnown RBP eCLIP8.05□□□□□ -1.126e-9■■■■■ 32.8
SMC4-219ENST00000487747 CDH24Q86UP0 819 aa8.05□□□□□ -1.12
SMC4-219ENST00000487747 AEBP1Q8IUX7 1158 aa8.05□□□□□ -1.12
SMC4-219ENST00000487747 MFSD4AQ8N468 514 aa8.05□□□□□ -1.12
SMC4-219ENST00000487747 MFSD2AQ8NA29 543 aa8.05□□□□□ -1.12
SMC4-219ENST00000487747 FAM161BQ96MY7 647 aa8.05□□□□□ -1.12
SMC4-219ENST00000487747 CTNND2Q9UQB3 1225 aa8.05□□□□□ -1.12
SMC4-219ENST00000487747 ST14Q9Y5Y6 855 aa8.05□□□□□ -1.12
SMC4-219ENST00000487747 ZNF503-AS2A6NEH8 195 aa8.04□□□□□ -1.12
SMC4-219ENST00000487747 F6X3S4 739 aa8.04□□□□□ -1.12
SMC4-219ENST00000487747 H3BS24 57 aa8.04□□□□□ -1.12
SMC4-219ENST00000487747 CTSHP09668 335 aa8.04□□□□□ -1.12
SMC4-219ENST00000487747 C22orf34Q6ZV56 151 aa8.04□□□□□ -1.12
SMC4-219ENST00000487747 NPAS4Q8IUM7 802 aa8.04□□□□□ -1.12
SMC4-219ENST00000487747 KRTAP4-2Q9BYR5 136 aa8.04□□□□□ -1.12
SMC4-219ENST00000487747 C19orf73Q9NVV2 129 aa8.04□□□□□ -1.12
SMC4-219ENST00000487747 DNAJC14Q6Y2X3 702 aaPredicted RBP8.03□□□□□ -1.12
SMC4-219ENST00000487747 TMEM40Q8WWA1 233 aa8.03□□□□□ -1.12
SMC4-219ENST00000487747 WASH4PA8MWX3 477 aa8.02□□□□□ -1.13
SMC4-219ENST00000487747 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.02□□□□□ -1.13
SMC4-219ENST00000487747 PGRP06401 933 aa8.02□□□□□ -1.13
SMC4-219ENST00000487747 LMNB1P20700 586 aa8.02□□□□□ -1.13
SMC4-219ENST00000487747 TAGLNQ01995 201 aaKnown RBP8.02□□□□□ -1.13
SMC4-219ENST00000487747 ZSWIM9Q86XI8 627 aa8.02□□□□□ -1.13
SMC4-219ENST00000487747 JARID2Q92833 1246 aaPredicted RBP8.02□□□□□ -1.13
SMC4-219ENST00000487747 MIR1-1HGQ9H1L0 117 aa8.02□□□□□ -1.13
SMC4-219ENST00000487747 LMCD1Q9NZU5 365 aa8.02□□□□□ -1.13
SMC4-219ENST00000487747 PATL2C9JE40 543 aaKnown RBP8.01□□□□□ -1.13
SMC4-219ENST00000487747 DAB2P98082 770 aa8.01□□□□□ -1.13
SMC4-219ENST00000487747 TNK2Q07912 1038 aa8.01□□□□□ -1.13
SMC4-219ENST00000487747 UBE2FQ969M7 185 aa8.01□□□□□ -1.13
SMC4-219ENST00000487747 LIN37Q96GY3 246 aaPredicted RBP8.01□□□□□ -1.13
SMC4-219ENST00000487747 TMEM87BQ96K49 555 aa8.01□□□□□ -1.13
SMC4-219ENST00000487747 CORINQ9Y5Q5 1042 aa8.01□□□□□ -1.13
SMC4-219ENST00000487747 MESP2Q0VG99 397 aa8□□□□□ -1.13
SMC4-219ENST00000487747 PSMD2Q13200 908 aa8□□□□□ -1.13
SMC4-219ENST00000487747 TAF1CQ15572 869 aaPredicted RBP8□□□□□ -1.13
SMC4-219ENST00000487747 KCNMB1Q16558 191 aa8□□□□□ -1.13
SMC4-219ENST00000487747 MRPL41Q8IXM3 137 aaKnown RBP8□□□□□ -1.13
SMC4-219ENST00000487747 PHC3Q8NDX5 983 aa8□□□□□ -1.13
SMC4-219ENST00000487747 ACSF2Q96CM8 615 aaPredicted RBP8□□□□□ -1.13
SMC4-219ENST00000487747 ZSWIM5Q9P217 1185 aa8□□□□□ -1.13
SMC4-219ENST00000487747 FARP2O94887 1054 aaPredicted RBP7.99□□□□□ -1.13
SMC4-219ENST00000487747 RPL6Q02878 288 aaKnown RBP7.99□□□□□ -1.13
SMC4-219ENST00000487747 TSNAXIP1Q2TAA8 658 aa7.99□□□□□ -1.13
SMC4-219ENST00000487747 BNC2Q6ZN30 1099 aaPredicted RBP7.99□□□□□ -1.13
SMC4-219ENST00000487747 Q96M66 194 aa7.99□□□□□ -1.13
SMC4-219ENST00000487747 TACC3Q9Y6A5 838 aa7.99□□□□□ -1.13
SMC4-219ENST00000487747 LRRC10BA6NIK2 292 aa7.98□□□□□ -1.13
SMC4-219ENST00000487747 UPK3BL1B0FP48 263 aa7.98□□□□□ -1.13
SMC4-219ENST00000487747 UPK3BL2E5RIL1 263 aa7.98□□□□□ -1.13
SMC4-219ENST00000487747 MLANAQ16655 118 aa7.98□□□□□ -1.13
SMC4-219ENST00000487747 FBXO33Q7Z6M2 555 aa7.98□□□□□ -1.13
SMC4-219ENST00000487747 MCATQ8IVS2 390 aaKnown RBP7.98□□□□□ -1.13
SMC4-219ENST00000487747 DNAJB8Q8NHS0 232 aa7.98□□□□□ -1.13
SMC4-219ENST00000487747 USP31Q70CQ4 1352 aa7.97□□□□□ -1.13
SMC4-219ENST00000487747 SLC6A19Q695T7 634 aa7.97□□□□□ -1.13
SMC4-219ENST00000487747 TMC4Q7Z404 712 aa7.97□□□□□ -1.13
SMC4-219ENST00000487747 PPP1R13LQ8WUF5 828 aa7.97□□□□□ -1.13
SMC4-219ENST00000487747 NOC4LQ9BVI4 516 aaKnown RBP7.97□□□□□ -1.13
SMC4-219ENST00000487747 ESR1P03372 595 aa7.96□□□□□ -1.14
SMC4-219ENST00000487747 AFMP43652 599 aa7.96□□□□□ -1.14
SMC4-219ENST00000487747 ST13P50502 369 aaKnown RBP7.96□□□□□ -1.14
SMC4-219ENST00000487747 ZNF746Q6NUN9 644 aaPredicted RBP7.96□□□□□ -1.14
SMC4-219ENST00000487747 DNAJC25-GNG10A0A024R161 153 aa7.95□□□□□ -1.14
SMC4-219ENST00000487747 FAM221AA4D161 298 aa7.95□□□□□ -1.14
SMC4-219ENST00000487747 PF4P02776 101 aa7.95□□□□□ -1.14
SMC4-219ENST00000487747 GDNFP39905 211 aa7.95□□□□□ -1.14
SMC4-219ENST00000487747 KIR3DL1P43629 444 aa7.95□□□□□ -1.14
SMC4-219ENST00000487747 RALGPS1Q5JS13 557 aa7.95□□□□□ -1.14
SMC4-219ENST00000487747 PRR23BQ6ZRT6 265 aa7.95□□□□□ -1.14
SMC4-219ENST00000487747 THAP5Q7Z6K1 395 aa7.95□□□□□ -1.14
SMC4-219ENST00000487747 KIRREL1Q96J84 757 aa7.95□□□□□ -1.14
SMC4-219ENST00000487747 DUSP15Q9H1R2 295 aaPredicted RBP7.95□□□□□ -1.14
SMC4-219ENST00000487747 CILPO75339 1184 aa7.94□□□□□ -1.14
SMC4-219ENST00000487747 F13A1P00488 732 aa7.94□□□□□ -1.14
SMC4-219ENST00000487747 CYP7A1P22680 504 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms