RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 KIF16BQ96L93 1317 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 GBF1Q92538 1859 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 MAPK4P31152 587 aa19.12■□□□□ 0.65
U2AF1-211ENST00000486519 MRPS5P82675 430 aaKnown RBP19.12■□□□□ 0.65
U2AF1-211ENST00000486519 MAP2K5Q13163 448 aa19.12■□□□□ 0.65
U2AF1-211ENST00000486519 PUM3Q15397 648 aaKnown RBP19.12■□□□□ 0.65
U2AF1-211ENST00000486519 PLEKHH3Q7Z736 793 aa19.12■□□□□ 0.65
U2AF1-211ENST00000486519 NPLOC4Q8TAT6 608 aa19.12■□□□□ 0.65
U2AF1-211ENST00000486519 PAGR1Q9BTK6 254 aa19.12■□□□□ 0.65
U2AF1-211ENST00000486519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.12■□□□□ 0.65
U2AF1-211ENST00000486519 IFIT1P09914 478 aaKnown RBP19.11■□□□□ 0.65
U2AF1-211ENST00000486519 CYP2C19P33261 490 aa19.11■□□□□ 0.65
U2AF1-211ENST00000486519 RABL6Q3YEC7 729 aaPredicted RBP19.11■□□□□ 0.65
U2AF1-211ENST00000486519 GRXCR1A8MXD5 290 aa19.1■□□□□ 0.65
U2AF1-211ENST00000486519 TBC1D12O60347 775 aa19.1■□□□□ 0.65
U2AF1-211ENST00000486519 VAMP4O75379 141 aa19.1■□□□□ 0.65
U2AF1-211ENST00000486519 CNMDO75829 334 aa19.1■□□□□ 0.65
U2AF1-211ENST00000486519 HOXA7P31268 230 aaPredicted RBP19.1■□□□□ 0.65
U2AF1-211ENST00000486519 CAP2P40123 477 aa19.1■□□□□ 0.65
U2AF1-211ENST00000486519 ALYREFQ86V81 257 aaKnown RBP19.1■□□□□ 0.65
U2AF1-211ENST00000486519 FERMT2Q96AC1 680 aa19.1■□□□□ 0.65
U2AF1-211ENST00000486519 TIFAQ96CG3 184 aa19.1■□□□□ 0.65
U2AF1-211ENST00000486519 OSBPL5Q9H0X9 879 aaPredicted RBP19.1■□□□□ 0.65
U2AF1-211ENST00000486519 UTYO14607 1347 aa19.09■□□□□ 0.65
U2AF1-211ENST00000486519 USP17L5A8MUK1 530 aa19.09■□□□□ 0.65
U2AF1-211ENST00000486519 RHBDL3P58872 404 aa19.09■□□□□ 0.65
U2AF1-211ENST00000486519 EDC3Q96F86 508 aaKnown RBP19.09■□□□□ 0.65
U2AF1-211ENST00000486519 C1QTNF1Q9BXJ1 281 aa19.09■□□□□ 0.65
U2AF1-211ENST00000486519 CHD7Q9P2D1 2997 aa19.08■□□□□ 0.65
U2AF1-211ENST00000486519 SALL1Q9NSC2 1324 aa19.08■□□□□ 0.65
U2AF1-211ENST00000486519 IGHA2P01877 340 aa19.08■□□□□ 0.64
U2AF1-211ENST00000486519 MYCNP04198 464 aaPredicted RBP19.08■□□□□ 0.64
U2AF1-211ENST00000486519 BTDP43251 543 aa19.08■□□□□ 0.64
U2AF1-211ENST00000486519 TFF2Q03403 129 aa19.08■□□□□ 0.64
U2AF1-211ENST00000486519 TLE2Q04725 743 aa19.08■□□□□ 0.64
U2AF1-211ENST00000486519 AKNAD1Q5T1N1 836 aa19.08■□□□□ 0.64
U2AF1-211ENST00000486519 MFSD14CQ5VZR4 134 aa19.08■□□□□ 0.64
U2AF1-211ENST00000486519 SLC4A10Q6U841 1118 aa19.08■□□□□ 0.64
U2AF1-211ENST00000486519 ZNF384Q8TF68 577 aa19.08■□□□□ 0.64
U2AF1-211ENST00000486519 BMP1P13497 986 aa19.07■□□□□ 0.64
U2AF1-211ENST00000486519 CYBAP13498 195 aa19.07■□□□□ 0.64
U2AF1-211ENST00000486519 SLC5A1P13866 664 aa19.07■□□□□ 0.64
U2AF1-211ENST00000486519 ADCYAP1R1P41586 468 aa19.07■□□□□ 0.64
U2AF1-211ENST00000486519 PHKA1P46020 1223 aa19.07■□□□□ 0.64
U2AF1-211ENST00000486519 SMCHD1A6NHR9 2005 aa19.07■□□□□ 0.64
U2AF1-211ENST00000486519 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.06■□□□□ 0.64
U2AF1-211ENST00000486519 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.06■□□□□ 0.64
U2AF1-211ENST00000486519 BACE1P56817 501 aa19.06■□□□□ 0.64
U2AF1-211ENST00000486519 KHSRPQ92945 711 aaKnown RBP eCLIP19.06■□□□□ 0.64
U2AF1-211ENST00000486519 GAS2L1Q99501 681 aaPredicted RBP19.06■□□□□ 0.64
U2AF1-211ENST00000486519 PBX4Q9BYU1 374 aa19.06■□□□□ 0.64
U2AF1-211ENST00000486519 C11orf16Q9NQ32 467 aa19.06■□□□□ 0.64
U2AF1-211ENST00000486519 HCN4Q9Y3Q4 1203 aa19.06■□□□□ 0.64
U2AF1-211ENST00000486519 ARIH1Q9Y4X5 557 aaPredicted RBP19.06■□□□□ 0.64
U2AF1-211ENST00000486519 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
U2AF1-211ENST00000486519 ALDH1L1O75891 902 aa19.05■□□□□ 0.64
U2AF1-211ENST00000486519 KCNQ1P51787 676 aa19.05■□□□□ 0.64
U2AF1-211ENST00000486519 LPIN2Q92539 896 aa19.05■□□□□ 0.64
U2AF1-211ENST00000486519 SNX27Q96L92 541 aa19.05■□□□□ 0.64
U2AF1-211ENST00000486519 MUC6Q6W4X9 2439 aa19.05■□□□□ 0.64
U2AF1-211ENST00000486519 CDK5RAP2Q96SN8 1893 aa19.05■□□□□ 0.64
U2AF1-211ENST00000486519 KBTBD13C9JR72 458 aa19.04■□□□□ 0.64
U2AF1-211ENST00000486519 MSCO60682 206 aa19.04■□□□□ 0.64
U2AF1-211ENST00000486519 RFX5P48382 616 aaPredicted RBP19.04■□□□□ 0.64
U2AF1-211ENST00000486519 ATG9AQ7Z3C6 839 aa19.04■□□□□ 0.64
U2AF1-211ENST00000486519 CCAR1Q8IX12 1150 aaKnown RBP19.04■□□□□ 0.64
U2AF1-211ENST00000486519 WDR18Q9BV38 432 aa19.04■□□□□ 0.64
U2AF1-211ENST00000486519 SRCIN1Q9C0H9 1055 aa19.04■□□□□ 0.64
U2AF1-211ENST00000486519 FAM86C2PA6NEL3 165 aa19.03■□□□□ 0.64
U2AF1-211ENST00000486519 IGFBP4P22692 258 aa19.03■□□□□ 0.64
U2AF1-211ENST00000486519 PTPREP23469 700 aa19.03■□□□□ 0.64
U2AF1-211ENST00000486519 ATP2B2Q01814 1243 aa19.03■□□□□ 0.64
U2AF1-211ENST00000486519 WDR78Q5VTH9 848 aa19.03■□□□□ 0.64
U2AF1-211ENST00000486519 WWC1Q8IX03 1113 aa19.03■□□□□ 0.64
U2AF1-211ENST00000486519 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.03■□□□□ 0.64
U2AF1-211ENST00000486519 TBC1D2Q9BYX2 928 aa19.03■□□□□ 0.64
U2AF1-211ENST00000486519 EMILIN3Q9NT22 766 aa19.03■□□□□ 0.64
U2AF1-211ENST00000486519 TMOD4Q9NZQ9 345 aa19.03■□□□□ 0.64
U2AF1-211ENST00000486519 MROH7-TTC4A0A0A0MT08 1334 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 PIEZO1Q92508 2521 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 KIAA0355O15063 1070 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 CLTBP09497 229 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 ADORA1P30542 326 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 FPGSQ05932 587 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 LRRC41Q15345 812 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 PRAMEF19Q5SWL8 479 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 DZIP1Q86YF9 867 aaKnown RBP19.02■□□□□ 0.64
U2AF1-211ENST00000486519 ARRDC4Q8NCT1 418 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 DNAJC18Q9H819 358 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 AS3MTQ9HBK9 375 aa19.02■□□□□ 0.64
U2AF1-211ENST00000486519 LRRC37A2A6NM11 1700 aa19.02■□□□□ 0.63
U2AF1-211ENST00000486519 SLC15A5A6NIM6 579 aa19.01■□□□□ 0.63
U2AF1-211ENST00000486519 EYA2O00167 538 aa19.01■□□□□ 0.63
U2AF1-211ENST00000486519 HOXC6P09630 235 aa19.01■□□□□ 0.63
U2AF1-211ENST00000486519 EXOSC9Q06265 439 aaKnown RBP19.01■□□□□ 0.63
U2AF1-211ENST00000486519 GRB14Q14449 540 aa19.01■□□□□ 0.63
U2AF1-211ENST00000486519 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
U2AF1-211ENST00000486519 FAM47AQ5JRC9 791 aa19.01■□□□□ 0.63
U2AF1-211ENST00000486519 C1orf53Q5VUE5 145 aa19.01■□□□□ 0.63
U2AF1-211ENST00000486519 C16orf59Q7L2K0 433 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms