RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 PTPN22Q9Y2R2 807 aa7.16□□□□□ -1.26
PTPN4-210ENST00000485247 ABCC4O15439 1325 aa7.16□□□□□ -1.26
PTPN4-210ENST00000485247 CUL9Q8IWT3 2517 aa7.16□□□□□ -1.26
PTPN4-210ENST00000485247 GNAT3A8MTJ3 354 aa7.15□□□□□ -1.26
PTPN4-210ENST00000485247 CDK2AP1O14519 115 aa7.15□□□□□ -1.26
PTPN4-210ENST00000485247 ZBTB7BO15156 539 aaPredicted RBP7.15□□□□□ -1.26
PTPN4-210ENST00000485247 CELA2BP08218 269 aaPredicted RBP7.15□□□□□ -1.26
PTPN4-210ENST00000485247 SREBF2Q12772 1141 aa7.15□□□□□ -1.26
PTPN4-210ENST00000485247 PRAMEF18Q5VWM3 479 aa7.15□□□□□ -1.26
PTPN4-210ENST00000485247 SP8Q8IXZ3 490 aa7.15□□□□□ -1.26
PTPN4-210ENST00000485247 CFHR5Q9BXR6 569 aa7.15□□□□□ -1.26
PTPN4-210ENST00000485247 NIFKQ9BYG3 293 aaKnown RBP7.15□□□□□ -1.26
PTPN4-210ENST00000485247 CRISPLD1Q9H336 500 aa7.15□□□□□ -1.26
PTPN4-210ENST00000485247 KCNQ5Q9NR82 932 aa7.15□□□□□ -1.26
PTPN4-210ENST00000485247 UBN2Q6ZU65 1347 aa7.15□□□□□ -1.26
PTPN4-210ENST00000485247 A0A0C4DFX4 3053 aa7.14□□□□□ -1.27
PTPN4-210ENST00000485247 A6NJR5 290 aa7.14□□□□□ -1.27
PTPN4-210ENST00000485247 BBOX1O75936 387 aa7.14□□□□□ -1.27
PTPN4-210ENST00000485247 RPS12P25398 132 aaKnown RBP7.14□□□□□ -1.27
PTPN4-210ENST00000485247 FOXK2Q01167 660 aa7.14□□□□□ -1.27
PTPN4-210ENST00000485247 LBRQ14739 615 aaKnown RBP7.14□□□□□ -1.27
PTPN4-210ENST00000485247 SLC4A8Q2Y0W8 1093 aa7.14□□□□□ -1.27
PTPN4-210ENST00000485247 RBBP6Q7Z6E9 1792 aaKnown RBP7.14□□□□□ -1.27
PTPN4-210ENST00000485247 ZDHHC1Q8WTX9 485 aa7.14□□□□□ -1.27
PTPN4-210ENST00000485247 DPF3Q92784 378 aa7.14□□□□□ -1.27
PTPN4-210ENST00000485247 ACDQ96AP0 544 aa7.14□□□□□ -1.27
PTPN4-210ENST00000485247 PANK3Q9H999 370 aa7.14□□□□□ -1.27
PTPN4-210ENST00000485247 NDFIP2Q9NV92 336 aa7.14□□□□□ -1.27
PTPN4-210ENST00000485247 DNAAF2Q9NVR5 837 aaKnown RBP7.14□□□□□ -1.27
PTPN4-210ENST00000485247 RTL9Q8NET4 1388 aa7.13□□□□□ -1.27
PTPN4-210ENST00000485247 ERVV-1B6SEH8 477 aa7.13□□□□□ -1.27
PTPN4-210ENST00000485247 BACH1O14867 736 aa7.13□□□□□ -1.27
PTPN4-210ENST00000485247 NTSR2O95665 410 aa7.13□□□□□ -1.27
PTPN4-210ENST00000485247 MX2P20592 715 aa7.13□□□□□ -1.27
PTPN4-210ENST00000485247 PGBD3Q8N328 593 aa7.13□□□□□ -1.27
PTPN4-210ENST00000485247 CD99L2Q8TCZ2 262 aa7.13□□□□□ -1.27
PTPN4-210ENST00000485247 ZNF333Q96JL9 665 aa7.13□□□□□ -1.27
PTPN4-210ENST00000485247 EFCC1Q9HA90 598 aa7.13□□□□□ -1.27
PTPN4-210ENST00000485247 SCHIP1Q9P0W5 487 aaPredicted RBP7.13□□□□□ -1.27
PTPN4-210ENST00000485247 HCN2Q9UL51 889 aa7.13□□□□□ -1.27
PTPN4-210ENST00000485247 SIPA1L3O60292 1781 aaPredicted RBP7.13□□□□□ -1.27
PTPN4-210ENST00000485247 CEP290O15078 2479 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 IBTKQ9P2D0 1353 aaPredicted RBP7.12□□□□□ -1.27
PTPN4-210ENST00000485247 MAP3K15Q6ZN16 1313 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 WTIPA6NIX2 430 aaPredicted RBP7.12□□□□□ -1.27
PTPN4-210ENST00000485247 SOX1O00570 391 aaPredicted RBP7.12□□□□□ -1.27
PTPN4-210ENST00000485247 BNIP3LO60238 219 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 ECE2O60344 883 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 DKK1O94907 266 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 TCIRG1Q13488 830 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 PRKG1Q13976 671 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 EFHC2Q5JST6 749 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 TBCELQ5QJ74 424 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 KIF6Q6ZMV9 814 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 TTLL7Q6ZT98 887 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 PPP1R42Q7Z4L9 355 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 TRIM50Q86XT4 487 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 ZNF34Q8IZ26 560 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 TPCN2Q8NHX9 752 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 GAS2L2Q8NHY3 880 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 ABHD17AQ96GS6 310 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 ERO1AQ96HE7 468 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 TFIP11Q9UBB9 837 aaKnown RBP7.12□□□□□ -1.27
PTPN4-210ENST00000485247 MAFBQ9Y5Q3 323 aaPredicted RBP7.12□□□□□ -1.27
PTPN4-210ENST00000485247 COL6A3P12111 3177 aa7.12□□□□□ -1.27
PTPN4-210ENST00000485247 CEMIPQ8WUJ3 1361 aa7.11□□□□□ -1.27
PTPN4-210ENST00000485247 HTTP42858 3142 aa7.11□□□□□ -1.27
PTPN4-210ENST00000485247 DIAPH1O60610 1272 aaKnown RBP7.11□□□□□ -1.27
PTPN4-210ENST00000485247 CAP1Q01518 475 aa7.11□□□□□ -1.27
PTPN4-210ENST00000485247 PTPN12Q05209 780 aaKnown RBP7.11□□□□□ -1.27
PTPN4-210ENST00000485247 SLC9C1Q4G0N8 1177 aa7.11□□□□□ -1.27
PTPN4-210ENST00000485247 CCDC102BQ68D86 513 aa7.11□□□□□ -1.27
PTPN4-210ENST00000485247 DDX46Q7L014 1031 aaKnown RBP7.11□□□□□ -1.27
PTPN4-210ENST00000485247 NBPF11Q86T75 865 aa7.11□□□□□ -1.27
PTPN4-210ENST00000485247 SLC9A9Q8IVB4 645 aa7.11□□□□□ -1.27
PTPN4-210ENST00000485247 C1orf216Q8TAB5 229 aa7.11□□□□□ -1.27
PTPN4-210ENST00000485247 PRO3102Q9H379 93 aa7.11□□□□□ -1.27
PTPN4-210ENST00000485247 NSFL1CQ9UNZ2 370 aaKnown RBP7.11□□□□□ -1.27
PTPN4-210ENST00000485247 RRP7AQ9Y3A4 280 aaKnown RBP7.11□□□□□ -1.27
PTPN4-210ENST00000485247 BRCA2P51587 3418 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 CENPFP49454 3210 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 PALM3A6NDB9 673 aaPredicted RBP7.1□□□□□ -1.27
PTPN4-210ENST00000485247 C2CD2LO14523 706 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 VIL1P09327 827 aaKnown RBP7.1□□□□□ -1.27
PTPN4-210ENST00000485247 HCLS1P14317 486 aaPredicted RBP7.1□□□□□ -1.27
PTPN4-210ENST00000485247 MYL6BP14649 208 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 NF2P35240 595 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 TXLNAP40222 546 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 ATP1A2P50993 1020 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 ZNF280AP59817 542 aaPredicted RBP7.1□□□□□ -1.27
PTPN4-210ENST00000485247 KCNMA1Q12791 1236 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 GRAPQ13588 217 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 SLC10A5Q5PT55 438 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 SH3PXD2AQ5TCZ1 1133 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 SIX5Q8N196 739 aa7.1□□□□□ -1.27
PTPN4-210ENST00000485247 GRAPLQ8TC17 118 aaPredicted RBP7.1□□□□□ -1.27
PTPN4-210ENST00000485247 UTP14AQ9BVJ6 771 aaKnown RBP7.1□□□□□ -1.27
PTPN4-210ENST00000485247 ZCCHC2Q9C0B9 1178 aaKnown RBP7.1□□□□□ -1.27
PTPN4-210ENST00000485247 ZDHHC3Q9NYG2 299 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms