RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TM4SF4P48230 202 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 EVX2Q03828 476 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 RRP1BQ14684 758 aaKnown RBP12.92□□□□□ -0.34
ATG4B-219ENST00000479941 VPS53Q5VIR6 699 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 C16orf86Q6ZW13 317 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 DYNLL2Q96FJ2 89 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 CABP5Q9NP86 173 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 WBP1LQ9NX94 342 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 KCNH4Q9UQ05 1017 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 ZHX2Q9Y6X8 837 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 ZMYM6O95789 1325 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 TESPA1A2RU30 521 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-219ENST00000479941 USP17L5A8MUK1 530 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 CXCL11O14625 94 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 SLC3A2P08195 630 aaKnown RBP12.91□□□□□ -0.34
ATG4B-219ENST00000479941 CDK8P49336 464 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 SNAPC2Q13487 334 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 ABCB5Q2M3G0 1257 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 MS4A4AQ96JQ5 239 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 AS3MTQ9HBK9 375 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 ZNF287Q9HBT7 754 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 ZBTB21Q9ULJ3 1066 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 AFG3L2Q9Y4W6 797 aa12.91□□□□□ -0.34
ATG4B-219ENST00000479941 CCL15-CCL14A0A0B4J2E2 113 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 CA12O43570 354 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 GH2P01242 217 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 FGAP02671 866 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 CETPP11597 493 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 PPARAQ07869 468 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 CCL15Q16663 113 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 OTUD7BQ6GQQ9 843 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 CCDC17Q96LX7 622 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 DSCC1Q9BVC3 393 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 DOCK1Q14185 1865 aa12.9□□□□□ -0.34
ATG4B-219ENST00000479941 SMIM22K7EJ46 135 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 SGSM2O43147 1006 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 ALDH1A1P00352 501 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 JAG1P78504 1218 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 PDE4BQ07343 736 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 ZNF280CQ8ND82 737 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 WDR18Q9BV38 432 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 MKNK2Q9HBH9 465 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 SAGE1Q9NXZ1 904 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 ANAPC4Q9UJX5 808 aa12.89□□□□□ -0.35
ATG4B-219ENST00000479941 A0A0G2JLL6 359 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-219ENST00000479941 TRIM75PA6NK02 468 aa12.88□□□□□ -0.35
ATG4B-219ENST00000479941 MPHOSPH10O00566 681 aaKnown RBP12.88□□□□□ -0.35
ATG4B-219ENST00000479941 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
ATG4B-219ENST00000479941 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
ATG4B-219ENST00000479941 SPP2Q13103 211 aa12.88□□□□□ -0.35
ATG4B-219ENST00000479941 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
ATG4B-219ENST00000479941 CASC1Q6TDU7 716 aa12.88□□□□□ -0.35
ATG4B-219ENST00000479941 TMEM179Q6ZVK1 233 aa12.88□□□□□ -0.35
ATG4B-219ENST00000479941 FASTKD5Q7L8L6 764 aaKnown RBP12.88□□□□□ -0.35
ATG4B-219ENST00000479941 PRRT2Q7Z6L0 340 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-219ENST00000479941 CCDC84Q86UT8 332 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-219ENST00000479941 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
ATG4B-219ENST00000479941 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
ATG4B-219ENST00000479941 IL25Q9H293 177 aa12.88□□□□□ -0.35
ATG4B-219ENST00000479941 RNF186Q9NXI6 227 aa12.88□□□□□ -0.35
ATG4B-219ENST00000479941 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-219ENST00000479941 LAMB1P07942 1786 aa12.88□□□□□ -0.35
ATG4B-219ENST00000479941 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
ATG4B-219ENST00000479941 CDC45O75419 566 aa12.87□□□□□ -0.35
ATG4B-219ENST00000479941 AKR1B1P15121 316 aa12.87□□□□□ -0.35
ATG4B-219ENST00000479941 RASA1P20936 1047 aa12.87□□□□□ -0.35
ATG4B-219ENST00000479941 SHROOM1Q2M3G4 852 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-219ENST00000479941 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-219ENST00000479941 PTPN18Q99952 460 aa12.87□□□□□ -0.35
ATG4B-219ENST00000479941 ZCCHC17Q9NP64 241 aaKnown RBP12.87□□□□□ -0.35
ATG4B-219ENST00000479941 CTNNA3Q9UI47 895 aa12.87□□□□□ -0.35
ATG4B-219ENST00000479941 ATAD5Q96QE3 1844 aa12.87□□□□□ -0.35
ATG4B-219ENST00000479941 C19orf81C9J6K1 198 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 IGF2BP3O00425 579 aaKnown RBP eCLIP12.86□□□□□ -0.35
ATG4B-219ENST00000479941 ZNF213O14771 459 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 PRDM1O75626 825 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 TRPA1O75762 1119 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 PCP11498 1178 aaKnown RBP12.86□□□□□ -0.35
ATG4B-219ENST00000479941 GUCY1A2P33402 732 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 BACE1P56817 501 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 CTDSPL2Q05D32 466 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 SEPT2Q15019 361 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 ANKRD23Q86SG2 305 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 STK11IPQ8N1F8 1099 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 CFHR5Q9BXR6 569 aa12.86□□□□□ -0.35
ATG4B-219ENST00000479941 PHIPQ8WWQ0 1821 aa12.85□□□□□ -0.35
ATG4B-219ENST00000479941 BTBD19C9JJ37 291 aa12.85□□□□□ -0.35
ATG4B-219ENST00000479941 FGRP09769 529 aa12.85□□□□□ -0.35
ATG4B-219ENST00000479941 CTCFP49711 727 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-219ENST00000479941 NT5C2P49902 561 aa12.85□□□□□ -0.35
ATG4B-219ENST00000479941 USP14P54578 494 aa12.85□□□□□ -0.35
ATG4B-219ENST00000479941 MOGSQ13724 837 aa12.85□□□□□ -0.35
ATG4B-219ENST00000479941 IMMTQ16891 758 aaKnown RBP12.85□□□□□ -0.35
ATG4B-219ENST00000479941 KIAA1211Q6ZU35 1233 aa12.85□□□□□ -0.35
ATG4B-219ENST00000479941 FAM43AQ8N2R8 423 aa12.85□□□□□ -0.35
ATG4B-219ENST00000479941 PROCA1Q8NCQ7 364 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-219ENST00000479941 ESYT1Q9BSJ8 1104 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms