RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 BTDP43251 543 aa19.2■□□□□ 0.66
HDLBP-238ENST00000479894 SHHQ15465 462 aa19.2■□□□□ 0.66
HDLBP-238ENST00000479894 MORN1Q5T089 497 aa19.2■□□□□ 0.66
HDLBP-238ENST00000479894 ATF7IPQ6VMQ6 1270 aa19.2■□□□□ 0.66
HDLBP-238ENST00000479894 DZIP1Q86YF9 867 aaKnown RBP19.2■□□□□ 0.66
HDLBP-238ENST00000479894 WDR18Q9BV38 432 aa19.2■□□□□ 0.66
HDLBP-238ENST00000479894 FBXO3Q9UK99 471 aa19.2■□□□□ 0.66
HDLBP-238ENST00000479894 HDAC5Q9UQL6 1122 aa19.2■□□□□ 0.66
HDLBP-238ENST00000479894 MAP4K4O95819 1239 aaPredicted RBP19.19■□□□□ 0.66
HDLBP-238ENST00000479894 RFX5P48382 616 aaPredicted RBP19.19■□□□□ 0.66
HDLBP-238ENST00000479894 HERVK_113P62684 666 aa19.19■□□□□ 0.66
HDLBP-238ENST00000479894 ATP2B3Q16720 1220 aa19.19■□□□□ 0.66
HDLBP-238ENST00000479894 GPR142Q7Z601 462 aa19.19■□□□□ 0.66
HDLBP-238ENST00000479894 LPAR1Q92633 364 aa19.19■□□□□ 0.66
HDLBP-238ENST00000479894 P2RX7Q99572 595 aaKnown RBP19.19■□□□□ 0.66
HDLBP-238ENST00000479894 TXNRD2Q9NNW7 524 aa19.19■□□□□ 0.66
HDLBP-238ENST00000479894 PDS5AQ29RF7 1337 aaKnown RBP19.19■□□□□ 0.66
HDLBP-238ENST00000479894 DNM1LO00429 736 aa19.18■□□□□ 0.66
HDLBP-238ENST00000479894 BACE1P56817 501 aa19.18■□□□□ 0.66
HDLBP-238ENST00000479894 CCL14Q16627 93 aa19.18■□□□□ 0.66
HDLBP-238ENST00000479894 ATG9AQ7Z3C6 839 aa19.18■□□□□ 0.66
HDLBP-238ENST00000479894 FTSJ3Q8IY81 847 aaKnown RBP19.18■□□□□ 0.66
HDLBP-238ENST00000479894 TMOD4Q9NZQ9 345 aa19.18■□□□□ 0.66
HDLBP-238ENST00000479894 MROH7-TTC4A0A0A0MT08 1334 aa19.18■□□□□ 0.66
HDLBP-238ENST00000479894 MYO9BQ13459 2157 aa19.17■□□□□ 0.66
HDLBP-238ENST00000479894 GPR75-ASB3A0A0A6YYF3 556 aa19.17■□□□□ 0.66
HDLBP-238ENST00000479894 FAM196BA6NMK8 535 aa19.17■□□□□ 0.66
HDLBP-238ENST00000479894 RHBDL3P58872 404 aa19.17■□□□□ 0.66
HDLBP-238ENST00000479894 RTP1P59025 263 aa19.17■□□□□ 0.66
HDLBP-238ENST00000479894 ERVK-9P63128 1117 aa19.17■□□□□ 0.66
HDLBP-238ENST00000479894 ERVK-24P63145 666 aa19.17■□□□□ 0.66
HDLBP-238ENST00000479894 C9orf50Q5SZB4 431 aa19.17■□□□□ 0.66
HDLBP-238ENST00000479894 SPTY2D1Q68D10 685 aaPredicted RBP19.17■□□□□ 0.66
HDLBP-238ENST00000479894 PLEKHH3Q7Z736 793 aa19.17■□□□□ 0.66
HDLBP-238ENST00000479894 CCAR1Q8IX12 1150 aaKnown RBP19.17■□□□□ 0.66
HDLBP-238ENST00000479894 CHMP4BQ9H444 224 aaKnown RBP19.17■□□□□ 0.66
HDLBP-238ENST00000479894 RBPJLQ9UBG7 517 aa19.17■□□□□ 0.66
HDLBP-238ENST00000479894 DDX20Q9UHI6 824 aaKnown RBP19.17■□□□□ 0.66
HDLBP-238ENST00000479894 HERC5Q9UII4 1024 aaKnown RBP19.17■□□□□ 0.66
HDLBP-238ENST00000479894 C19orf81C9J6K1 198 aa19.16■□□□□ 0.66
HDLBP-238ENST00000479894 CIAO1O76071 339 aa19.16■□□□□ 0.66
HDLBP-238ENST00000479894 PLA2G5P39877 138 aa19.16■□□□□ 0.66
HDLBP-238ENST00000479894 PHKA1P46020 1223 aa19.16■□□□□ 0.66
HDLBP-238ENST00000479894 ATN1P54259 1190 aaPredicted RBP19.16■□□□□ 0.66
HDLBP-238ENST00000479894 MAP2K5Q13163 448 aa19.16■□□□□ 0.66
HDLBP-238ENST00000479894 MFSD14CQ5VZR4 134 aa19.16■□□□□ 0.66
HDLBP-238ENST00000479894 SIPA1L1O43166 1804 aa19.16■□□□□ 0.66
HDLBP-238ENST00000479894 MTMR2Q13614 643 aa19.15■□□□□ 0.66
HDLBP-238ENST00000479894 Q3C1V9 767 aa19.15■□□□□ 0.66
HDLBP-238ENST00000479894 PORCNQ9H237 461 aa19.15■□□□□ 0.66
HDLBP-238ENST00000479894 CEP126Q9P2H0 1117 aa19.15■□□□□ 0.66
HDLBP-238ENST00000479894 ABCF2Q9UG63 623 aa19.15■□□□□ 0.66
HDLBP-238ENST00000479894 GLRX3O76003 335 aaKnown RBP19.14■□□□□ 0.65
HDLBP-238ENST00000479894 ASNSP08243 561 aa19.14■□□□□ 0.65
HDLBP-238ENST00000479894 RRP1BQ14684 758 aaKnown RBP19.14■□□□□ 0.65
HDLBP-238ENST00000479894 EDC3Q96F86 508 aaKnown RBP19.14■□□□□ 0.65
HDLBP-238ENST00000479894 PEX10O60683 326 aa19.13■□□□□ 0.65
HDLBP-238ENST00000479894 CCDC102BQ68D86 513 aa19.13■□□□□ 0.65
HDLBP-238ENST00000479894 USP44Q9H0E7 712 aa19.13■□□□□ 0.65
HDLBP-238ENST00000479894 GINM1Q9NU53 330 aa19.13■□□□□ 0.65
HDLBP-238ENST00000479894 ATP11BQ9Y2G3 1177 aa19.13■□□□□ 0.65
HDLBP-238ENST00000479894 USP17L10C9JJH3 530 aa19.12■□□□□ 0.65
HDLBP-238ENST00000479894 TRIM27P14373 513 aa19.12■□□□□ 0.65
HDLBP-238ENST00000479894 RASGRF1Q13972 1273 aa19.12■□□□□ 0.65
HDLBP-238ENST00000479894 SNX17Q15036 470 aa19.12■□□□□ 0.65
HDLBP-238ENST00000479894 SLC39A5Q6ZMH5 540 aa19.12■□□□□ 0.65
HDLBP-238ENST00000479894 BADQ92934 168 aa19.12■□□□□ 0.65
HDLBP-238ENST00000479894 FAM122AQ96E09 287 aa19.12■□□□□ 0.65
HDLBP-238ENST00000479894 CDK5RAP2Q96SN8 1893 aa19.11■□□□□ 0.65
HDLBP-238ENST00000479894 FOCADQ5VW36 1801 aa19.11■□□□□ 0.65
HDLBP-238ENST00000479894 LDHCP07864 332 aa19.11■□□□□ 0.65
HDLBP-238ENST00000479894 HOXC6P09630 235 aa19.11■□□□□ 0.65
HDLBP-238ENST00000479894 CCNA1P78396 465 aa19.11■□□□□ 0.65
HDLBP-238ENST00000479894 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
HDLBP-238ENST00000479894 ARRDC4Q8NCT1 418 aa19.11■□□□□ 0.65
HDLBP-238ENST00000479894 CWC22Q9HCG8 908 aaKnown RBP19.11■□□□□ 0.65
HDLBP-238ENST00000479894 PI4KBQ9UBF8 816 aa19.11■□□□□ 0.65
HDLBP-238ENST00000479894 SLC15A5A6NIM6 579 aa19.1■□□□□ 0.65
HDLBP-238ENST00000479894 MECOMQ03112 1051 aa19.1■□□□□ 0.65
HDLBP-238ENST00000479894 C1orf53Q5VUE5 145 aa19.1■□□□□ 0.65
HDLBP-238ENST00000479894 ATXN2LQ8WWM7 1075 aaKnown RBP19.1■□□□□ 0.65
HDLBP-238ENST00000479894 PAGR1Q9BTK6 254 aa19.1■□□□□ 0.65
HDLBP-238ENST00000479894 DHX36Q9H2U1 1008 aaKnown RBP19.1■□□□□ 0.65
HDLBP-238ENST00000479894 PRDM5Q9NQX1 630 aaPredicted RBP19.1■□□□□ 0.65
HDLBP-238ENST00000479894 FLRT1Q9NZU1 646 aa19.1■□□□□ 0.65
HDLBP-238ENST00000479894 RABGAP1Q9Y3P9 1069 aa19.1■□□□□ 0.65
HDLBP-238ENST00000479894 CNGA1P29973 690 aa19.09■□□□□ 0.65
HDLBP-238ENST00000479894 IL15P40933 162 aaPredicted RBP19.09■□□□□ 0.65
HDLBP-238ENST00000479894 GSTO1P78417 241 aa19.09■□□□□ 0.65
HDLBP-238ENST00000479894 ATP2B2Q01814 1243 aa19.09■□□□□ 0.65
HDLBP-238ENST00000479894 USP38Q8NB14 1042 aa19.09■□□□□ 0.65
HDLBP-238ENST00000479894 PDLIM7Q9NR12 457 aa19.09■□□□□ 0.65
HDLBP-238ENST00000479894 RAPGEFL1Q9UHV5 662 aa19.09■□□□□ 0.65
HDLBP-238ENST00000479894 BDP1A6H8Y1 2624 aa19.09■□□□□ 0.65
HDLBP-238ENST00000479894 ZNF236Q9UL36 1845 aa19.09■□□□□ 0.65
HDLBP-238ENST00000479894 KBTBD13C9JR72 458 aa19.08■□□□□ 0.64
HDLBP-238ENST00000479894 IGHA2P01877 340 aa19.08■□□□□ 0.64
HDLBP-238ENST00000479894 GNAI3P08754 354 aa19.08■□□□□ 0.64
HDLBP-238ENST00000479894 PTPREP23469 700 aa19.08■□□□□ 0.64
HDLBP-238ENST00000479894 POTEEQ6S8J3 1075 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms