RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	HABP4	Q5JVS0	413 aa	Known RBP	5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	ZGPAT	Q8N5A5	531 aa	Known RBP	5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	KIF1BP	Q96EK5	621 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	PTPN18	Q99952	460 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	RIOK1	Q9BRS2	568 aa	Known RBP	5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	VEZT	Q9HBM0	779 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	RNF186	Q9NXI6	227 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	NDUFB9	Q9Y6M9	179 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	SPDYE5	A6NIY4	337 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	DLL1	O00548	723 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	ZNF157	P51786	506 aa	Predicted RBP	5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	TNFAIP1	Q13829	316 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	IL1RAPL2	Q9NP60	686 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	ANGEL1	Q9UNK9	670 aa	Known RBP	5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	GRXCR2	A6NFK2	248 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	MYO1B	O43795	1136 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	CHGB	P05060	677 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	RGS3	P49796	1198 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	JAG1	P78504	1218 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	PROX2	Q3B8N5	592 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	C6orf132	Q5T0Z8	1188 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	AACS	Q86V21	672 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	PI4K2B	Q8TCG2	481 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	NEUROD6	Q96NK8	337 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	SNRK	Q9NRH2	765 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	KCNH4	Q9UQ05	1017 aa		5.2	□□□□□ -1.58
POLR2B-208	ENST00000478188	FRMPD3	Q5JV73	1810 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	SMARCA5	O60264	1052 aa	Predicted RBP	5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	ATP5J	P18859	108 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	COL9A1	P20849	921 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	LBX1	P52954	281 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	HDAC1	Q13547	482 aa	Predicted RBP	5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	SUPT20HL1	Q3ZLR7	823 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	TTC39A	Q5SRH9	613 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	ERICH6	Q7L0X2	663 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	ARMC9	Q7Z3E5	817 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	HAUS7	Q99871	368 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	OSBPL5	Q9H0X9	879 aa	Predicted RBP	5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	USP40	Q9NVE5	1235 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	FLT1	P17948	1338 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	TNRC18	O15417	2968 aa	Predicted RBP	5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	ZNF236	Q9UL36	1845 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	RBM5	P52756	815 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	HSP90AB4P	Q58FF6	505 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	TMED8	Q6PL24	325 aa	Predicted RBP	5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	NYAP1	Q6ZVC0	841 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	ANKRD13A	Q8IZ07	590 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	OTUD7A	Q8TE49	926 aa	Predicted RBP	5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	BRI3BP	Q8WY22	251 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	EDC3	Q96F86	508 aa	Known RBP	5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	KIAA1468	Q9P260	1216 aa		5.19	□□□□□ -1.58
POLR2B-208	ENST00000478188	INPP5B	P32019	993 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	TNNI2	P48788	182 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	DYNLL1	P63167	89 aa	Known RBP	5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	PRKG1	Q13976	671 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	SLFNL1	Q499Z3	407 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	OPTN	Q96CV9	577 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	TSKS	Q9UJT2	592 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	SYNGAP1	Q96PV0	1343 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	COL11A1	P12107	1806 aa	Predicted RBP	5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	FOXP2	O15409	715 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	HMMR	O75330	724 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	FRAT2	O75474	233 aa	Predicted RBP	5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	IREB2	P48200	963 aa	Known RBP	5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	PPIL2	Q13356	520 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	SHROOM1	Q2M3G4	852 aa	Predicted RBP	5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	CCDC158	Q5M9N0	1113 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	GPAT2	Q6NUI2	795 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	DZIP1	Q86YF9	867 aa	Known RBP	5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	ZKSCAN4	Q969J2	545 aa	Predicted RBP	5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	ZNF341	Q9BYN7	854 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	ELP3	Q9H9T3	547 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	ABCF2	Q9UG63	623 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	MYH4	Q9Y623	1939 aa		5.18	□□□□□ -1.58
POLR2B-208	ENST00000478188	PDE6A	P16499	860 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	NF2	P35240	595 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	ADD2	P35612	726 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	GSTO1	P78417	241 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	GABPA	Q06546	454 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	SMC5	Q8IY18	1101 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	LRRCC1	Q9C099	1032 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	CHMP4B	Q9H444	224 aa	Known RBP	5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	ROBO3	Q96MS0	1386 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	MANSC4	A6NHS7	340 aa	Predicted RBP	5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	PPP1R12B	O60237	982 aa	Predicted RBP	5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	TCP10	Q12799	353 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	SMYD5	Q6GMV2	418 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	ZFR	Q96KR1	1074 aa	Known RBP	5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	WRNIP1	Q96S55	665 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	STAP2	Q9UGK3	403 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	AFG3L2	Q9Y4W6	797 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188		A0A0G2JLL6	359 aa	Predicted RBP	5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	SOWAHB	A6NEL2	793 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	TRIM6-TRIM34	B2RNG4	842 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	SMIM22	K7EJ46	135 aa		5.17	□□□□□ -1.58
POLR2B-208	ENST00000478188	IGHD	P01880	384 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms